RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 MT1XP80297 61 aa4.32□□□□□ -1.72
CDCA3-201ENST00000229265 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
CDCA3-201ENST00000229265 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CDCA3-201ENST00000229265 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
CDCA3-201ENST00000229265 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
CDCA3-201ENST00000229265 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
CDCA3-201ENST00000229265 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
CDCA3-201ENST00000229265 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
CDCA3-201ENST00000229265 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
CDCA3-201ENST00000229265 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
CDCA3-201ENST00000229265 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
CDCA3-201ENST00000229265 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
CDCA3-201ENST00000229265 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
CDCA3-201ENST00000229265 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
CDCA3-201ENST00000229265 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
CDCA3-201ENST00000229265 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
CDCA3-201ENST00000229265 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
CDCA3-201ENST00000229265 SPRR2EP22531 72 aa4.03□□□□□ -1.76
CDCA3-201ENST00000229265 SPRR2BP35325 72 aa4.03□□□□□ -1.76
CDCA3-201ENST00000229265 SPRR2AP35326 72 aa4.03□□□□□ -1.76
CDCA3-201ENST00000229265 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
CDCA3-201ENST00000229265 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
CDCA3-201ENST00000229265 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
CDCA3-201ENST00000229265 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
CDCA3-201ENST00000229265 SPRR2DP22532 72 aa3.87□□□□□ -1.79
CDCA3-201ENST00000229265 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
CDCA3-201ENST00000229265 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
CDCA3-201ENST00000229265 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
CDCA3-201ENST00000229265 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
CDCA3-201ENST00000229265 MT1EP04732 61 aa3.79□□□□□ -1.8
CDCA3-201ENST00000229265 MT1LQ93083 61 aa3.74□□□□□ -1.81
CDCA3-201ENST00000229265 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
CDCA3-201ENST00000229265 H3BS24 57 aa3.72□□□□□ -1.81
CDCA3-201ENST00000229265 MT1GP13640 62 aa3.71□□□□□ -1.82
CDCA3-201ENST00000229265 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
CDCA3-201ENST00000229265 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CDCA3-201ENST00000229265 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
CDCA3-201ENST00000229265 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
CDCA3-201ENST00000229265 MT1MQ8N339 61 aa3.55□□□□□ -1.84
CDCA3-201ENST00000229265 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
CDCA3-201ENST00000229265 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
CDCA3-201ENST00000229265 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
CDCA3-201ENST00000229265 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
CDCA3-201ENST00000229265 MT4P47944 62 aa3.46□□□□□ -1.86
CDCA3-201ENST00000229265 INE1O15225 51 aa3.44□□□□□ -1.86
CDCA3-201ENST00000229265 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
CDCA3-201ENST00000229265 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
CDCA3-201ENST00000229265 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
CDCA3-201ENST00000229265 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
CDCA3-201ENST00000229265 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
CDCA3-201ENST00000229265 MT1AP04731 61 aa3.22□□□□□ -1.89
CDCA3-201ENST00000229265 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
CDCA3-201ENST00000229265 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
CDCA3-201ENST00000229265 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
CDCA3-201ENST00000229265 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
CDCA3-201ENST00000229265 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
CDCA3-201ENST00000229265 MT3P25713 68 aa2.96□□□□□ -1.94
CDCA3-201ENST00000229265 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
CDCA3-201ENST00000229265 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
CDCA3-201ENST00000229265 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
CDCA3-201ENST00000229265 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
CDCA3-201ENST00000229265 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
CDCA3-201ENST00000229265 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
CDCA3-201ENST00000229265 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
CDCA3-201ENST00000229265 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
CDCA3-201ENST00000229265 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
CDCA3-201ENST00000229265 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
CDCA3-201ENST00000229265 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
CDCA3-201ENST00000229265 PRM1P04553 51 aa2.49□□□□□ -2.01
CDCA3-201ENST00000229265 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
CDCA3-201ENST00000229265 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
CDCA3-201ENST00000229265 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CDCA3-201ENST00000229265 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
CDCA3-201ENST00000229265 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
CDCA3-201ENST00000229265 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CDCA3-201ENST00000229265 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
CDCA3-201ENST00000229265 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms