RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 A0A0A0MQY5 61 aa6.57□□□□□ -1.36
CBX1-201ENST00000225603 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
CBX1-201ENST00000225603 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
CBX1-201ENST00000225603 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
CBX1-201ENST00000225603 KRTAP6-3Q3LI67 103 aa6.48□□□□□ -1.37
CBX1-201ENST00000225603 MT1LQ93083 61 aa6.43□□□□□ -1.38
CBX1-201ENST00000225603 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
CBX1-201ENST00000225603 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
CBX1-201ENST00000225603 MDN1Q9NU22 5596 aa6.33□□□□□ -1.4
CBX1-201ENST00000225603 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
CBX1-201ENST00000225603 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
CBX1-201ENST00000225603 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
CBX1-201ENST00000225603 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
CBX1-201ENST00000225603 SPRR2EP22531 72 aa6.26□□□□□ -1.41
CBX1-201ENST00000225603 SPRR2BP35325 72 aa6.26□□□□□ -1.41
CBX1-201ENST00000225603 SPRR2AP35326 72 aa6.26□□□□□ -1.41
CBX1-201ENST00000225603 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
CBX1-201ENST00000225603 MT1GP13640 62 aa6.25□□□□□ -1.41
CBX1-201ENST00000225603 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
CBX1-201ENST00000225603 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
CBX1-201ENST00000225603 MT1MQ8N339 61 aa6.21□□□□□ -1.42
CBX1-201ENST00000225603 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
CBX1-201ENST00000225603 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.43
CBX1-201ENST00000225603 NEBP20929 6669 aa6.1□□□□□ -1.43
CBX1-201ENST00000225603 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
CBX1-201ENST00000225603 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
CBX1-201ENST00000225603 SPRR2DP22532 72 aa6.02□□□□□ -1.45
CBX1-201ENST00000225603 KRTAP4-12Q9BQ66 201 aa6□□□□□ -1.45
CBX1-201ENST00000225603 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
CBX1-201ENST00000225603 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
CBX1-201ENST00000225603 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
CBX1-201ENST00000225603 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
CBX1-201ENST00000225603 INE1O15225 51 aa5.76□□□□□ -1.49
CBX1-201ENST00000225603 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
CBX1-201ENST00000225603 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
CBX1-201ENST00000225603 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
CBX1-201ENST00000225603 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
CBX1-201ENST00000225603 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
CBX1-201ENST00000225603 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
CBX1-201ENST00000225603 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
CBX1-201ENST00000225603 MT1AP04731 61 aa5.44□□□□□ -1.54
CBX1-201ENST00000225603 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
CBX1-201ENST00000225603 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
CBX1-201ENST00000225603 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
CBX1-201ENST00000225603 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
CBX1-201ENST00000225603 MT4P47944 62 aa5.27□□□□□ -1.57
CBX1-201ENST00000225603 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
CBX1-201ENST00000225603 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
CBX1-201ENST00000225603 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
CBX1-201ENST00000225603 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
CBX1-201ENST00000225603 MT3P25713 68 aa4.92□□□□□ -1.62
CBX1-201ENST00000225603 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
CBX1-201ENST00000225603 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
CBX1-201ENST00000225603 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
CBX1-201ENST00000225603 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
CBX1-201ENST00000225603 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
CBX1-201ENST00000225603 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
CBX1-201ENST00000225603 PRM1P04553 51 aa4.38□□□□□ -1.71
CBX1-201ENST00000225603 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
CBX1-201ENST00000225603 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
CBX1-201ENST00000225603 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
CBX1-201ENST00000225603 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
CBX1-201ENST00000225603 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
CBX1-201ENST00000225603 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
CBX1-201ENST00000225603 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
CBX1-201ENST00000225603 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.76
CBX1-201ENST00000225603 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
CBX1-201ENST00000225603 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
CBX1-201ENST00000225603 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
CBX1-201ENST00000225603 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
CBX1-201ENST00000225603 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
CBX1-201ENST00000225603 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
CBX1-201ENST00000225603 LCE1FQ5T754 118 aa3.21□□□□□ -1.89
CBX1-201ENST00000225603 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
CBX1-201ENST00000225603 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
CBX1-201ENST00000225603 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
CBX1-201ENST00000225603 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 83.4 ms