RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
TVP23C-201ENST00000225576 MT1EP04732 61 aa6.09□□□□□ -1.44
TVP23C-201ENST00000225576 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
TVP23C-201ENST00000225576 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
TVP23C-201ENST00000225576 H3BS24 57 aa6□□□□□ -1.45
TVP23C-201ENST00000225576 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
TVP23C-201ENST00000225576 MT1LQ93083 61 aa5.98□□□□□ -1.45
TVP23C-201ENST00000225576 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
TVP23C-201ENST00000225576 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
TVP23C-201ENST00000225576 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
TVP23C-201ENST00000225576 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
TVP23C-201ENST00000225576 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
TVP23C-201ENST00000225576 MT1GP13640 62 aa5.81□□□□□ -1.48
TVP23C-201ENST00000225576 SPRR2EP22531 72 aa5.8□□□□□ -1.48
TVP23C-201ENST00000225576 SPRR2BP35325 72 aa5.8□□□□□ -1.48
TVP23C-201ENST00000225576 SPRR2AP35326 72 aa5.8□□□□□ -1.48
TVP23C-201ENST00000225576 LUZP6Q538Z0 58 aa5.79□□□□□ -1.48
TVP23C-201ENST00000225576 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
TVP23C-201ENST00000225576 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
TVP23C-201ENST00000225576 MT1MQ8N339 61 aa5.73□□□□□ -1.49
TVP23C-201ENST00000225576 LCE1AQ5T7P2 110 aa5.71□□□□□ -1.5
TVP23C-201ENST00000225576 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
TVP23C-201ENST00000225576 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
TVP23C-201ENST00000225576 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
TVP23C-201ENST00000225576 SPRR2DP22532 72 aa5.61□□□□□ -1.51
TVP23C-201ENST00000225576 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
TVP23C-201ENST00000225576 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
TVP23C-201ENST00000225576 GPR98Q8WXG9 6306 aa5.48□□□□□ -1.53
TVP23C-201ENST00000225576 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
TVP23C-201ENST00000225576 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
TVP23C-201ENST00000225576 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
TVP23C-201ENST00000225576 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
TVP23C-201ENST00000225576 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
TVP23C-201ENST00000225576 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
TVP23C-201ENST00000225576 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
TVP23C-201ENST00000225576 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
TVP23C-201ENST00000225576 MT1AP04731 61 aa5.08□□□□□ -1.6
TVP23C-201ENST00000225576 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
TVP23C-201ENST00000225576 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
TVP23C-201ENST00000225576 AHNAK2Q8IVF2 5795 aa5.03□□□□□ -1.6
TVP23C-201ENST00000225576 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
TVP23C-201ENST00000225576 MT4P47944 62 aa4.97□□□□□ -1.61
TVP23C-201ENST00000225576 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
TVP23C-201ENST00000225576 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
TVP23C-201ENST00000225576 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
TVP23C-201ENST00000225576 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
TVP23C-201ENST00000225576 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
TVP23C-201ENST00000225576 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
TVP23C-201ENST00000225576 INE1O15225 51 aa4.71□□□□□ -1.66
TVP23C-201ENST00000225576 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
TVP23C-201ENST00000225576 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
TVP23C-201ENST00000225576 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
TVP23C-201ENST00000225576 MT3P25713 68 aa4.62□□□□□ -1.67
TVP23C-201ENST00000225576 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
TVP23C-201ENST00000225576 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
TVP23C-201ENST00000225576 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
TVP23C-201ENST00000225576 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
TVP23C-201ENST00000225576 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
TVP23C-201ENST00000225576 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
TVP23C-201ENST00000225576 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
TVP23C-201ENST00000225576 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
TVP23C-201ENST00000225576 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
TVP23C-201ENST00000225576 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
TVP23C-201ENST00000225576 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
TVP23C-201ENST00000225576 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
TVP23C-201ENST00000225576 PRM1P04553 51 aa3.79□□□□□ -1.8
TVP23C-201ENST00000225576 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
TVP23C-201ENST00000225576 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
TVP23C-201ENST00000225576 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
TVP23C-201ENST00000225576 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
TVP23C-201ENST00000225576 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
TVP23C-201ENST00000225576 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
TVP23C-201ENST00000225576 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
TVP23C-201ENST00000225576 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
TVP23C-201ENST00000225576 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
TVP23C-201ENST00000225576 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
TVP23C-201ENST00000225576 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 19.2 ms