RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 KMT2DO14686 5537 aa7.39□□□□□ -1.23
CCDC130-201ENST00000221554 MT1EP04732 61 aa7.36□□□□□ -1.23
CCDC130-201ENST00000221554 MT1LQ93083 61 aa7.33□□□□□ -1.24
CCDC130-201ENST00000221554 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
CCDC130-201ENST00000221554 KRTAP9-6A8MVA2 160 aa7.25□□□□□ -1.25
CCDC130-201ENST00000221554 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
CCDC130-201ENST00000221554 KRTAP6-3Q3LI67 103 aa7.14□□□□□ -1.27
CCDC130-201ENST00000221554 KRTAP2-3P0C7H8 128 aa7.13□□□□□ -1.27
CCDC130-201ENST00000221554 KRTAP2-4Q9BYR9 128 aa7.13□□□□□ -1.27
CCDC130-201ENST00000221554 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
CCDC130-201ENST00000221554 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
CCDC130-201ENST00000221554 KRTAP5-9P26371 169 aa7.04□□□□□ -1.28
CCDC130-201ENST00000221554 MT1GP13640 62 aa6.98□□□□□ -1.29
CCDC130-201ENST00000221554 KRTAP19-3Q7Z4W3 81 aa6.95□□□□□ -1.3
CCDC130-201ENST00000221554 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
CCDC130-201ENST00000221554 MDN1Q9NU22 5596 aa6.93□□□□□ -1.3
CCDC130-201ENST00000221554 MT1MQ8N339 61 aa6.88□□□□□ -1.31
CCDC130-201ENST00000221554 NEBP20929 6669 aa6.85□□□□□ -1.31
CCDC130-201ENST00000221554 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
CCDC130-201ENST00000221554 LCE1AQ5T7P2 110 aa6.73□□□□□ -1.33
CCDC130-201ENST00000221554 SPRR2EP22531 72 aa6.72□□□□□ -1.33
CCDC130-201ENST00000221554 SPRR2BP35325 72 aa6.72□□□□□ -1.33
CCDC130-201ENST00000221554 SPRR2AP35326 72 aa6.72□□□□□ -1.33
CCDC130-201ENST00000221554 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
CCDC130-201ENST00000221554 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
CCDC130-201ENST00000221554 SPRR2DP22532 72 aa6.48□□□□□ -1.37
CCDC130-201ENST00000221554 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
CCDC130-201ENST00000221554 KRTAP20-1Q3LI63 56 aa6.39□□□□□ -1.39
CCDC130-201ENST00000221554 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
CCDC130-201ENST00000221554 MT1AP04731 61 aa6.23□□□□□ -1.41
CCDC130-201ENST00000221554 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
CCDC130-201ENST00000221554 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
CCDC130-201ENST00000221554 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
CCDC130-201ENST00000221554 KRTAP5-5Q701N2 237 aaPredicted RBP6.12□□□□□ -1.43
CCDC130-201ENST00000221554 LCE3DQ9BYE3 92 aa5.94□□□□□ -1.46
CCDC130-201ENST00000221554 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
CCDC130-201ENST00000221554 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
CCDC130-201ENST00000221554 LCE3EQ5T5B0 92 aa5.87□□□□□ -1.47
CCDC130-201ENST00000221554 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
CCDC130-201ENST00000221554 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
CCDC130-201ENST00000221554 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
CCDC130-201ENST00000221554 MT4P47944 62 aa5.68□□□□□ -1.5
CCDC130-201ENST00000221554 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
CCDC130-201ENST00000221554 MT3P25713 68 aa5.65□□□□□ -1.51
CCDC130-201ENST00000221554 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
CCDC130-201ENST00000221554 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
CCDC130-201ENST00000221554 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
CCDC130-201ENST00000221554 PRM1P04553 51 aa5.43□□□□□ -1.54
CCDC130-201ENST00000221554 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
CCDC130-201ENST00000221554 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
CCDC130-201ENST00000221554 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
CCDC130-201ENST00000221554 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
CCDC130-201ENST00000221554 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
CCDC130-201ENST00000221554 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
CCDC130-201ENST00000221554 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
CCDC130-201ENST00000221554 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
CCDC130-201ENST00000221554 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
CCDC130-201ENST00000221554 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
CCDC130-201ENST00000221554 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
CCDC130-201ENST00000221554 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
CCDC130-201ENST00000221554 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
CCDC130-201ENST00000221554 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
CCDC130-201ENST00000221554 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
CCDC130-201ENST00000221554 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
CCDC130-201ENST00000221554 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
CCDC130-201ENST00000221554 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
CCDC130-201ENST00000221554 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
CCDC130-201ENST00000221554 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
CCDC130-201ENST00000221554 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
CCDC130-201ENST00000221554 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
CCDC130-201ENST00000221554 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CCDC130-201ENST00000221554 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
CCDC130-201ENST00000221554 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
CCDC130-201ENST00000221554 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
CCDC130-201ENST00000221554 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
CCDC130-201ENST00000221554 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
CCDC130-201ENST00000221554 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 267.7 ms