RNA–Protein interactions for RNA: ENST00000218328.12

HUWE1-201, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene HUWE1, Length 5,488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-201ENST00000218328 MT3P25713 68 aa5.43□□□□□ -1.54
HUWE1-201ENST00000218328 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
HUWE1-201ENST00000218328 KRTAP19-6Q3LI70 58 aa5.38□□□□□ -1.55
HUWE1-201ENST00000218328 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
HUWE1-201ENST00000218328 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
HUWE1-201ENST00000218328 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
HUWE1-201ENST00000218328 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
HUWE1-201ENST00000218328 MT4P47944 62 aa5.25□□□□□ -1.57
HUWE1-201ENST00000218328 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
HUWE1-201ENST00000218328 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
HUWE1-201ENST00000218328 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
HUWE1-201ENST00000218328 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
HUWE1-201ENST00000218328 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
HUWE1-201ENST00000218328 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
HUWE1-201ENST00000218328 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
HUWE1-201ENST00000218328 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
HUWE1-201ENST00000218328 MT1AP04731 61 aa5.16□□□□□ -1.58
HUWE1-201ENST00000218328 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.59
HUWE1-201ENST00000218328 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
HUWE1-201ENST00000218328 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
HUWE1-201ENST00000218328 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
HUWE1-201ENST00000218328 MUC2Q02817 5179 aa4.98□□□□□ -1.61
HUWE1-201ENST00000218328 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
HUWE1-201ENST00000218328 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
HUWE1-201ENST00000218328 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
HUWE1-201ENST00000218328 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
HUWE1-201ENST00000218328 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
HUWE1-201ENST00000218328 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
HUWE1-201ENST00000218328 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
HUWE1-201ENST00000218328 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
HUWE1-201ENST00000218328 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
HUWE1-201ENST00000218328 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.65
HUWE1-201ENST00000218328 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
HUWE1-201ENST00000218328 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
HUWE1-201ENST00000218328 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
HUWE1-201ENST00000218328 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
HUWE1-201ENST00000218328 USH2AO75445 5202 aa4.46□□□□□ -1.7
HUWE1-201ENST00000218328 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
HUWE1-201ENST00000218328 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
HUWE1-201ENST00000218328 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
HUWE1-201ENST00000218328 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
HUWE1-201ENST00000218328 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
HUWE1-201ENST00000218328 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
HUWE1-201ENST00000218328 KMT2DO14686 5537 aa4.15□□□□□ -1.75
HUWE1-201ENST00000218328 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
HUWE1-201ENST00000218328 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
HUWE1-201ENST00000218328 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
HUWE1-201ENST00000218328 SSPOA2VEC9 5147 aa4□□□□□ -1.77
HUWE1-201ENST00000218328 NEBP20929 6669 aa4□□□□□ -1.77
HUWE1-201ENST00000218328 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
HUWE1-201ENST00000218328 MUC12Q9UKN1 5478 aa3.91□□□□□ -1.78
HUWE1-201ENST00000218328 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
HUWE1-201ENST00000218328 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
HUWE1-201ENST00000218328 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
HUWE1-201ENST00000218328 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
HUWE1-201ENST00000218328 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
HUWE1-201ENST00000218328 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
HUWE1-201ENST00000218328 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
HUWE1-201ENST00000218328 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
HUWE1-201ENST00000218328 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
HUWE1-201ENST00000218328 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
HUWE1-201ENST00000218328 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
HUWE1-201ENST00000218328 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
HUWE1-201ENST00000218328 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
HUWE1-201ENST00000218328 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
HUWE1-201ENST00000218328 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
HUWE1-201ENST00000218328 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
HUWE1-201ENST00000218328 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.97
HUWE1-201ENST00000218328 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
HUWE1-201ENST00000218328 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
HUWE1-201ENST00000218328 PHGR1C9JFL3 82 aa2.54□□□□□ -2
HUWE1-201ENST00000218328 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
HUWE1-201ENST00000218328 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
HUWE1-201ENST00000218328 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
HUWE1-201ENST00000218328 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
HUWE1-201ENST00000218328 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.05
HUWE1-201ENST00000218328 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
HUWE1-201ENST00000218328 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 51.7 ms