RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 MT1LQ93083 61 aa4.19□□□□□ -1.74
MARK3-201ENST00000216288 MT1EP04732 61 aa4.18□□□□□ -1.74
MARK3-201ENST00000216288 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
MARK3-201ENST00000216288 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
MARK3-201ENST00000216288 MT1GP13640 62 aa4.09□□□□□ -1.75
MARK3-201ENST00000216288 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
MARK3-201ENST00000216288 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
MARK3-201ENST00000216288 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
MARK3-201ENST00000216288 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
MARK3-201ENST00000216288 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
MARK3-201ENST00000216288 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
MARK3-201ENST00000216288 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
MARK3-201ENST00000216288 MT1MQ8N339 61 aa3.91□□□□□ -1.78
MARK3-201ENST00000216288 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
MARK3-201ENST00000216288 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
MARK3-201ENST00000216288 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
MARK3-201ENST00000216288 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.8
MARK3-201ENST00000216288 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
MARK3-201ENST00000216288 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
MARK3-201ENST00000216288 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
MARK3-201ENST00000216288 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
MARK3-201ENST00000216288 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
MARK3-201ENST00000216288 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
MARK3-201ENST00000216288 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
MARK3-201ENST00000216288 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
MARK3-201ENST00000216288 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
MARK3-201ENST00000216288 SPRR2EP22531 72 aa3.47□□□□□ -1.85
MARK3-201ENST00000216288 SPRR2BP35325 72 aa3.47□□□□□ -1.85
MARK3-201ENST00000216288 SPRR2AP35326 72 aa3.47□□□□□ -1.85
MARK3-201ENST00000216288 MT1AP04731 61 aa3.44□□□□□ -1.86
MARK3-201ENST00000216288 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
MARK3-201ENST00000216288 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
MARK3-201ENST00000216288 PRM1P04553 51 aa3.39□□□□□ -1.87
MARK3-201ENST00000216288 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
MARK3-201ENST00000216288 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
MARK3-201ENST00000216288 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
MARK3-201ENST00000216288 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
MARK3-201ENST00000216288 SPRR2DP22532 72 aa3.29□□□□□ -1.88
MARK3-201ENST00000216288 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
MARK3-201ENST00000216288 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
MARK3-201ENST00000216288 MT3P25713 68 aa3.11□□□□□ -1.91
MARK3-201ENST00000216288 NEBP20929 6669 aa3.1□□□□□ -1.91
MARK3-201ENST00000216288 LCE4AQ5TA78 99 aa3.09□□□□□ -1.92
MARK3-201ENST00000216288 MT4P47944 62 aa3.07□□□□□ -1.92
MARK3-201ENST00000216288 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
MARK3-201ENST00000216288 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
MARK3-201ENST00000216288 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
MARK3-201ENST00000216288 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
MARK3-201ENST00000216288 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
MARK3-201ENST00000216288 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.94
MARK3-201ENST00000216288 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
MARK3-201ENST00000216288 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
MARK3-201ENST00000216288 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
MARK3-201ENST00000216288 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
MARK3-201ENST00000216288 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
MARK3-201ENST00000216288 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
MARK3-201ENST00000216288 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
MARK3-201ENST00000216288 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
MARK3-201ENST00000216288 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
MARK3-201ENST00000216288 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
MARK3-201ENST00000216288 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
MARK3-201ENST00000216288 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
MARK3-201ENST00000216288 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
MARK3-201ENST00000216288 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
MARK3-201ENST00000216288 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
MARK3-201ENST00000216288 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
MARK3-201ENST00000216288 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
MARK3-201ENST00000216288 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
MARK3-201ENST00000216288 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
MARK3-201ENST00000216288 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
MARK3-201ENST00000216288 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
MARK3-201ENST00000216288 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
MARK3-201ENST00000216288 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
MARK3-201ENST00000216288 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
MARK3-201ENST00000216288 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
MARK3-201ENST00000216288 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
MARK3-201ENST00000216288 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 63.2 ms