RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 LCE3EQ5T5B0 92 aa6.01□□□□□ -1.45
MBD3-201ENST00000156825 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
MBD3-201ENST00000156825 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
MBD3-201ENST00000156825 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
MBD3-201ENST00000156825 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
MBD3-201ENST00000156825 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
MBD3-201ENST00000156825 MT1MQ8N339 61 aa5.94□□□□□ -1.46
MBD3-201ENST00000156825 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
MBD3-201ENST00000156825 MT4P47944 62 aa5.89□□□□□ -1.47
MBD3-201ENST00000156825 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
MBD3-201ENST00000156825 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.48
MBD3-201ENST00000156825 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
MBD3-201ENST00000156825 SYNE2Q8WXH0 6885 aaKnown RBP5.78□□□□□ -1.48
MBD3-201ENST00000156825 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
MBD3-201ENST00000156825 MT3P25713 68 aa5.7□□□□□ -1.5
MBD3-201ENST00000156825 LCE1BQ5T7P3 118 aa5.61□□□□□ -1.51
MBD3-201ENST00000156825 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
MBD3-201ENST00000156825 PRM1P04553 51 aa5.6□□□□□ -1.51
MBD3-201ENST00000156825 LCE1DQ5T752 114 aa5.59□□□□□ -1.52
MBD3-201ENST00000156825 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
MBD3-201ENST00000156825 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
MBD3-201ENST00000156825 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
MBD3-201ENST00000156825 MT1AP04731 61 aa5.43□□□□□ -1.54
MBD3-201ENST00000156825 USH2AO75445 5202 aa5.4□□□□□ -1.54
MBD3-201ENST00000156825 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
MBD3-201ENST00000156825 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
MBD3-201ENST00000156825 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
MBD3-201ENST00000156825 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
MBD3-201ENST00000156825 KMT2DO14686 5537 aa5.34□□□□□ -1.55
MBD3-201ENST00000156825 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
MBD3-201ENST00000156825 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
MBD3-201ENST00000156825 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
MBD3-201ENST00000156825 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
MBD3-201ENST00000156825 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
MBD3-201ENST00000156825 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
MBD3-201ENST00000156825 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
MBD3-201ENST00000156825 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
MBD3-201ENST00000156825 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
MBD3-201ENST00000156825 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
MBD3-201ENST00000156825 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
MBD3-201ENST00000156825 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
MBD3-201ENST00000156825 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
MBD3-201ENST00000156825 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
MBD3-201ENST00000156825 MUC19Q7Z5P9 8384 aa4.73□□□□□ -1.65
MBD3-201ENST00000156825 SSPOA2VEC9 5147 aa4.71□□□□□ -1.65
MBD3-201ENST00000156825 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
MBD3-201ENST00000156825 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
MBD3-201ENST00000156825 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
MBD3-201ENST00000156825 NEBP20929 6669 aa4.6□□□□□ -1.67
MBD3-201ENST00000156825 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
MBD3-201ENST00000156825 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
MBD3-201ENST00000156825 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
MBD3-201ENST00000156825 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
MBD3-201ENST00000156825 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
MBD3-201ENST00000156825 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
MBD3-201ENST00000156825 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
MBD3-201ENST00000156825 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
MBD3-201ENST00000156825 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
MBD3-201ENST00000156825 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
MBD3-201ENST00000156825 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
MBD3-201ENST00000156825 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
MBD3-201ENST00000156825 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
MBD3-201ENST00000156825 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
MBD3-201ENST00000156825 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
MBD3-201ENST00000156825 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
MBD3-201ENST00000156825 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
MBD3-201ENST00000156825 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
MBD3-201ENST00000156825 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
MBD3-201ENST00000156825 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.94
MBD3-201ENST00000156825 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
MBD3-201ENST00000156825 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
MBD3-201ENST00000156825 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
MBD3-201ENST00000156825 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
MBD3-201ENST00000156825 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
MBD3-201ENST00000156825 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
MBD3-201ENST00000156825 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
MBD3-201ENST00000156825 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms