RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
PPP1R3F-201ENST00000055335 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
PPP1R3F-201ENST00000055335 MT1GP13640 62 aa6.59□□□□□ -1.35
PPP1R3F-201ENST00000055335 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.36
PPP1R3F-201ENST00000055335 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
PPP1R3F-201ENST00000055335 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
PPP1R3F-201ENST00000055335 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
PPP1R3F-201ENST00000055335 OBSCNQ5VST9 7968 aa6.41□□□□□ -1.38
PPP1R3F-201ENST00000055335 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.4
PPP1R3F-201ENST00000055335 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
PPP1R3F-201ENST00000055335 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
PPP1R3F-201ENST00000055335 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
PPP1R3F-201ENST00000055335 MT1MQ8N339 61 aa6.24□□□□□ -1.41
PPP1R3F-201ENST00000055335 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
PPP1R3F-201ENST00000055335 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
PPP1R3F-201ENST00000055335 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
PPP1R3F-201ENST00000055335 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
PPP1R3F-201ENST00000055335 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
PPP1R3F-201ENST00000055335 KRTAP9-2Q9BYQ4 174 aa5.86□□□□□ -1.47
PPP1R3F-201ENST00000055335 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
PPP1R3F-201ENST00000055335 KRTAP6-1Q3LI64 71 aa5.84□□□□□ -1.48
PPP1R3F-201ENST00000055335 PRM1P04553 51 aa5.83□□□□□ -1.48
PPP1R3F-201ENST00000055335 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
PPP1R3F-201ENST00000055335 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
PPP1R3F-201ENST00000055335 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
PPP1R3F-201ENST00000055335 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
PPP1R3F-201ENST00000055335 MT1AP04731 61 aa5.66□□□□□ -1.5
PPP1R3F-201ENST00000055335 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
PPP1R3F-201ENST00000055335 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
PPP1R3F-201ENST00000055335 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
PPP1R3F-201ENST00000055335 SPRR2EP22531 72 aa5.27□□□□□ -1.57
PPP1R3F-201ENST00000055335 SPRR2BP35325 72 aa5.27□□□□□ -1.57
PPP1R3F-201ENST00000055335 SPRR2AP35326 72 aa5.27□□□□□ -1.57
PPP1R3F-201ENST00000055335 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
PPP1R3F-201ENST00000055335 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
PPP1R3F-201ENST00000055335 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
PPP1R3F-201ENST00000055335 MT3P25713 68 aa5.06□□□□□ -1.6
PPP1R3F-201ENST00000055335 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
PPP1R3F-201ENST00000055335 SPRR2DP22532 72 aa5□□□□□ -1.61
PPP1R3F-201ENST00000055335 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
PPP1R3F-201ENST00000055335 MT4P47944 62 aa4.63□□□□□ -1.67
PPP1R3F-201ENST00000055335 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
PPP1R3F-201ENST00000055335 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
PPP1R3F-201ENST00000055335 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
PPP1R3F-201ENST00000055335 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
PPP1R3F-201ENST00000055335 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
PPP1R3F-201ENST00000055335 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
PPP1R3F-201ENST00000055335 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
PPP1R3F-201ENST00000055335 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
PPP1R3F-201ENST00000055335 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
PPP1R3F-201ENST00000055335 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
PPP1R3F-201ENST00000055335 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
PPP1R3F-201ENST00000055335 NEBP20929 6669 aa4.23□□□□□ -1.73
PPP1R3F-201ENST00000055335 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
PPP1R3F-201ENST00000055335 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
PPP1R3F-201ENST00000055335 LCE4AQ5TA78 99 aa4□□□□□ -1.77
PPP1R3F-201ENST00000055335 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
PPP1R3F-201ENST00000055335 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
PPP1R3F-201ENST00000055335 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
PPP1R3F-201ENST00000055335 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
PPP1R3F-201ENST00000055335 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
PPP1R3F-201ENST00000055335 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
PPP1R3F-201ENST00000055335 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
PPP1R3F-201ENST00000055335 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
PPP1R3F-201ENST00000055335 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
PPP1R3F-201ENST00000055335 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
PPP1R3F-201ENST00000055335 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
PPP1R3F-201ENST00000055335 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
PPP1R3F-201ENST00000055335 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
PPP1R3F-201ENST00000055335 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PPP1R3F-201ENST00000055335 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
PPP1R3F-201ENST00000055335 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
PPP1R3F-201ENST00000055335 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
PPP1R3F-201ENST00000055335 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
PPP1R3F-201ENST00000055335 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
PPP1R3F-201ENST00000055335 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
PPP1R3F-201ENST00000055335 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 55.5 ms