RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Them7Q9DCP4 223 aa13.16□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm15080A2BI02 449 aa13.16□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 A930003A15RikQ3U552 87 aa13.16□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 P01630 113 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 CckP09240 115 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Defa20Q45VN2 95 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Zc2hc1aQ8BJH1 324 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Brd3osA0A1B0GRB6 84 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Klk1b4P00757 256 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm10188Q3V432 135 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm28269A0A087WSG3 125 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm37988J3QM41 62 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 P01793 123 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Tusc5Q8C838 173 aa13.15□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Ccl21aP84444 133 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Ccl21bP86792 133 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Ccl21cP86793 133 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 4930447F04RikA2AFR2 126 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Defa16P50714 93 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 MdfiP70331 251 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Ang5Q5GAN1 145 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 4933414I15RikQ9D4D5 133 aa13.14□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 P01786 117 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Heatr5aQ5PRF0 2038 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm10767Q3TQP0 103 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Trav14-3A0A075B607 120 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Pygo2Q80V76 405 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Taf15Q8BQ46 557 aaKnown RBP13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Igkv3-1A0A075B5P1 119 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Igkv4-81A0A0G2JEY5 119 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm6034E9Q101 117 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm19684G3UZ45 117 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 CtsgP28293 261 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Sdhaf1Q3U276 118 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Atp6v0bQ91V37 205 aa13.13□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Igkv3-2A0A075B5P0 119 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Trav14-2A0A075B694 121 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Ighv5-9-1A0A0A6YVS4 126 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm5089A1L3C8 106 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Rnf183Q8QZS5 190 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Ighv1-74A0A0G2JGK2 117 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm9961Q8BNV2 113 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gemin7Q9CWY4 129 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 F5O88783 2183 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Defa4P28311 92 aa13.12□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm815Q3UWS2 115 aa13.11□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Sslp1Q3UN54 99 aa13.11□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Crybg1A0A0G2JG52 2065 aa13.11□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Smim10l1A0A087WNQ7 89 aa13.11□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Ighv1-23A0A0A6YVW3 117 aa13.11□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 P04942 107 aa13.11□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Igkv4-62A0A0G2JDW9 117 aa13.11□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm45213A0A0U1RNZ6 101 aa13.1□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 P01738 130 aa13.1□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Cysrt1Q9D1E4 142 aa13.1□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Tmem210Q9D2F0 147 aa13.1□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Gm16381A0A1Y7VKT9 73 aa13.1□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Trip12G5E870 2025 aaKnown RBP13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Ighv1-64A0A075B5X3 117 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Reg3gO09049 174 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Scgb1b2O35176 93 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Olfr312Q7TRZ9 308 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Dmrtc1c1Q9D410 238 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Synj2bpQ9D6K5 145 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Rnf114Q9ET26 229 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 Igkv8-24A0A140T8P5 121 aa13.09□□□□□ -0.31
Ubfd1-201ENSMUST00000033158 MalO09198 153 aa13.08□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Gm26558Q8BLW8 286 aa13.08□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Defa26Q3L180 93 aa13.08□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 March3Q8BRX9 218 aa13.08□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Tmem14cQ9CQN6 114 aa13.08□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Gm7102J3QQ10 178 aa13.07□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Trav14d-1A0A075B6B1 121 aa13.07□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Shisal2aA2A9G7 189 aa13.07□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Cd24P24807 76 aa13.07□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 AvpP35455 168 aa13.07□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 MsmpB1AWI6 139 aa13.07□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 SpinklQ8CEK3 90 aa13.07□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 P01791 123 aa13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Rai1Q61818 1889 aa13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Greb1Q3UHK3 1954 aa13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Ighv1-4A0A075B5T4 117 aa13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Igll1P20764 209 aa13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Gm17324Q8C6J8 137 aa13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Hist1h4aP62806 103 aaKnown RBP13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Zcwpw2Q08EN7 125 aa13.06□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Defa7P50705 93 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Gm20499D3Z4G5 72 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Insl3O09107 122 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 CstadQ9D245 104 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Fam216aQ9DB54 251 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Anapc1P53995 1944 aaKnown RBP13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Gm10638F6QEG2 257 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Rpl32-psP17932 135 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Tal2Q62282 108 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Tomm6Q9CQN3 74 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Gm21994F6T2D2 329 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Fam110dQ80X91 271 aa13.05□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Defa-rs2P17534 91 aa13.04□□□□□ -0.32
Ubfd1-201ENSMUST00000033158 Dad1P61804 113 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 61.1 ms