RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 S100A3P33764 101 aa1.2□□□□□ -2.22
KPNB1-208ENST00000580019 SPATA8Q6RVD6 105 aa1.2□□□□□ -2.22
KPNB1-208ENST00000580019 HEPN1Q6WQI6 88 aa1.2□□□□□ -2.22
KPNB1-208ENST00000580019 Q5BKY6 102 aa1.19□□□□□ -2.22
KPNB1-208ENST00000580019 RPS27LQ71UM5 84 aaKnown RBP1.19□□□□□ -2.22
KPNB1-208ENST00000580019 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
KPNB1-208ENST00000580019 Q6ZSA8 131 aa1.18□□□□□ -2.22
KPNB1-208ENST00000580019 TRBV7-4A0A0J9YYF1 115 aa1.17□□□□□ -2.22
KPNB1-208ENST00000580019 A0A1B0GU69 56 aa1.17□□□□□ -2.22
KPNB1-208ENST00000580019 SPINK7P58062 85 aa1.17□□□□□ -2.22
KPNB1-208ENST00000580019 DEFB114Q30KQ6 69 aa1.17□□□□□ -2.22
KPNB1-208ENST00000580019 A0A087WXM4 84 aa1.16□□□□□ -2.22
KPNB1-208ENST00000580019 NDUFB1O75438 58 aa1.16□□□□□ -2.22
KPNB1-208ENST00000580019 HTN3P15516 51 aa1.16□□□□□ -2.22
KPNB1-208ENST00000580019 IFI27P40305 119 aaPredicted RBP1.16□□□□□ -2.22
KPNB1-208ENST00000580019 KRTAP12-3P60328 96 aa1.16□□□□□ -2.22
KPNB1-208ENST00000580019 S100ZQ8WXG8 99 aa1.16□□□□□ -2.22
KPNB1-208ENST00000580019 KMT2DO14686 5537 aa1.15□□□□□ -2.23
KPNB1-208ENST00000580019 ARL14EPLP0DKL9 152 aa1.15□□□□□ -2.23
KPNB1-208ENST00000580019 SPINK9Q5DT21 86 aa1.15□□□□□ -2.23
KPNB1-208ENST00000580019 RPL38P63173 70 aaKnown RBP1.14□□□□□ -2.23
KPNB1-208ENST00000580019 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
KPNB1-208ENST00000580019 A0A087WWC5 75 aa1.13□□□□□ -2.23
KPNB1-208ENST00000580019 SPART-AS1P0CW21 52 aa1.13□□□□□ -2.23
KPNB1-208ENST00000580019 LEAP2Q969E1 77 aa1.13□□□□□ -2.23
KPNB1-208ENST00000580019 FLGP20930 4061 aaPredicted RBP1.13□□□□□ -2.23
KPNB1-208ENST00000580019 FAM103A1Q9BTL3 118 aaKnown RBP1.12□□□□□ -2.23
KPNB1-208ENST00000580019 TRAV21A0A0B4J279 112 aa1.11□□□□□ -2.23
KPNB1-208ENST00000580019 H3BUA1 57 aa1.11□□□□□ -2.23
KPNB1-208ENST00000580019 NDUFA3O95167 84 aa1.11□□□□□ -2.23
KPNB1-208ENST00000580019 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
KPNB1-208ENST00000580019 COX8AP10176 69 aa1.11□□□□□ -2.23
KPNB1-208ENST00000580019 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
KPNB1-208ENST00000580019 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
KPNB1-208ENST00000580019 LINC00959A0A1B0GUT2 108 aa1.1□□□□□ -2.23
KPNB1-208ENST00000580019 CPSF4LA6NMK7 179 aaKnown RBP1.1□□□□□ -2.23
KPNB1-208ENST00000580019 H3BVH4 76 aa1.1□□□□□ -2.23
KPNB1-208ENST00000580019 MT1HP80294 61 aa1.1□□□□□ -2.23
KPNB1-208ENST00000580019 USMG5Q96IX5 58 aa1.1□□□□□ -2.23
KPNB1-208ENST00000580019 RPS27P42677 84 aaKnown RBP1.09□□□□□ -2.23
KPNB1-208ENST00000580019 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
KPNB1-208ENST00000580019 C10orf95Q9H7T3 257 aa1.09□□□□□ -2.23
KPNB1-208ENST00000580019 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
KPNB1-208ENST00000580019 M0R2T5 61 aa1.08□□□□□ -2.24
KPNB1-208ENST00000580019 COX7BP24311 80 aa1.08□□□□□ -2.24
KPNB1-208ENST00000580019 DEFB131AP59861 70 aa1.08□□□□□ -2.24
KPNB1-208ENST00000580019 NREPQ16612 68 aa1.08□□□□□ -2.24
KPNB1-208ENST00000580019 PIGYQ3MUY2 71 aa1.08□□□□□ -2.24
KPNB1-208ENST00000580019 GNG13Q9P2W3 67 aa1.08□□□□□ -2.24
KPNB1-208ENST00000580019 PRH1P02810 166 aa1.07□□□□□ -2.24
KPNB1-208ENST00000580019 APELAP0DMC3 54 aa1.07□□□□□ -2.24
KPNB1-208ENST00000580019 DEFB130BP0DP73 79 aa1.07□□□□□ -2.24
KPNB1-208ENST00000580019 DEFB130AP0DP74 79 aa1.07□□□□□ -2.24
KPNB1-208ENST00000580019 ATXN8Q156A1 80 aa1.07□□□□□ -2.24
KPNB1-208ENST00000580019 KLK9Q2XQG4 91 aa1.07□□□□□ -2.24
KPNB1-208ENST00000580019 COX6A2Q02221 97 aa1.06□□□□□ -2.24
KPNB1-208ENST00000580019 LINC01590Q5TEZ4 76 aa1.06□□□□□ -2.24
KPNB1-208ENST00000580019 KRTAP2-1Q9BYU5 128 aa1.06□□□□□ -2.24
KPNB1-208ENST00000580019 A0A096LPF7 62 aa1.05□□□□□ -2.24
KPNB1-208ENST00000580019 KRTAP19-2Q3LHN2 52 aa1.05□□□□□ -2.24
KPNB1-208ENST00000580019 SPINK6Q6UWN8 80 aa1.05□□□□□ -2.24
KPNB1-208ENST00000580019 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
KPNB1-208ENST00000580019 A0A0D9SG42 100 aa1.04□□□□□ -2.24
KPNB1-208ENST00000580019 I3L2K1 104 aa1.04□□□□□ -2.24
KPNB1-208ENST00000580019 SFTA3P0C7M3 94 aa1.04□□□□□ -2.24
KPNB1-208ENST00000580019 WFDC10BQ8IUB3 73 aa1.04□□□□□ -2.24
KPNB1-208ENST00000580019 RHPN1-AS1Q9BWJ2 59 aa1.04□□□□□ -2.24
KPNB1-208ENST00000580019 PRO0255Q9UI72 69 aa1.04□□□□□ -2.24
KPNB1-208ENST00000580019 FXYD6-FXYD2A0A087WZ82 144 aa1.03□□□□□ -2.24
KPNB1-208ENST00000580019 H3BNG1 76 aa1.03□□□□□ -2.24
KPNB1-208ENST00000580019 NDUFA4O00483 81 aa1.03□□□□□ -2.24
KPNB1-208ENST00000580019 C3orf79P0CE67 100 aa1.03□□□□□ -2.24
KPNB1-208ENST00000580019 KRTAP19-6Q3LI70 58 aa1.03□□□□□ -2.24
KPNB1-208ENST00000580019 CRIPTQ9P021 101 aa1.03□□□□□ -2.24
KPNB1-208ENST00000580019 RPL39P5Q59GN2 51 aa1.02□□□□□ -2.25
KPNB1-208ENST00000580019 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
KPNB1-208ENST00000580019 A8MTW9 85 aa1.01□□□□□ -2.25
KPNB1-208ENST00000580019 I3L3M4 83 aa1.01□□□□□ -2.25
KPNB1-208ENST00000580019 Q8IZM0 81 aa1.01□□□□□ -2.25
KPNB1-208ENST00000580019 NOP10Q9NPE3 64 aaKnown RBP1.01□□□□□ -2.25
KPNB1-208ENST00000580019 CMC2Q9NRP2 79 aa1.01□□□□□ -2.25
KPNB1-208ENST00000580019 TIMM8BQ9Y5J9 83 aaPredicted RBP1.01□□□□□ -2.25
KPNB1-208ENST00000580019 K7EQZ3 153 aa1□□□□□ -2.25
KPNB1-208ENST00000580019 HTN1P15515 57 aa1□□□□□ -2.25
KPNB1-208ENST00000580019 DEFB1P60022 68 aa1□□□□□ -2.25
KPNB1-208ENST00000580019 LINC01556Q5JQF7 62 aa1□□□□□ -2.25
KPNB1-208ENST00000580019 TMEM167AQ8TBQ9 72 aa1□□□□□ -2.25
KPNB1-208ENST00000580019 K7EIM0 57 aa0.99□□□□□ -2.25
KPNB1-208ENST00000580019 TTTY10Q9BZA0 68 aa0.99□□□□□ -2.25
KPNB1-208ENST00000580019 SPRR2EP22531 72 aa0.98□□□□□ -2.25
KPNB1-208ENST00000580019 SPRR2BP35325 72 aa0.98□□□□□ -2.25
KPNB1-208ENST00000580019 SPRR2AP35326 72 aa0.98□□□□□ -2.25
KPNB1-208ENST00000580019 ENHOQ6UWT2 76 aa0.98□□□□□ -2.25
KPNB1-208ENST00000580019 COX6B2Q6YFQ2 88 aa0.98□□□□□ -2.25
KPNB1-208ENST00000580019 UBL5Q9BZL1 73 aa0.98□□□□□ -2.25
KPNB1-208ENST00000580019 WT1-ASQ06250 92 aa0.97□□□□□ -2.25
KPNB1-208ENST00000580019 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
KPNB1-208ENST00000580019 LINC01549A6NIU2 74 aa0.96□□□□□ -2.26
KPNB1-208ENST00000580019 SNRPGP62308 76 aaKnown RBP0.96□□□□□ -2.26
KPNB1-208ENST00000580019 PRCDQ00LT1 54 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms