RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 HIGD1BQ9P298 99 aa0.47□□□□□ -2.33
SMG1-212ENST00000566328 NEBP20929 6669 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 A0A0B4J2C4 111 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 LOC105371267A0A1B0GV96 52 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 A8MWP4 228 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 C9JAW5 83 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 TMEM256-PLSCR3K7ERE1 68 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 BPY2O14599 106 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 TAX1BP3O14907 124 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 NDUFS5O43920 106 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 TRACP01848 142 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 WFDC13Q8IUB5 93 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 COPS9Q8WXC6 57 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 C8orf17Q9NRJ1 99 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 UQCR10Q9UDW1 63 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 CBY1Q9Y3M2 126 aa0.46□□□□□ -2.34
SMG1-212ENST00000566328 TRBV7-4A0A0J9YYF1 115 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 A0A1B0GX51 115 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 PCP4L1A6NKN8 68 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 K7EP34 96 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 K7EQZ3 153 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 SNCGO76070 127 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 DNAL4O96015 105 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 COX6CP09669 75 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 HSD52Q0P140 79 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 ATXN8Q156A1 80 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 NREPQ16612 68 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 KRTAP19-6Q3LI70 58 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 PRR15Q8IV56 129 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 DSCR8Q96T75 97 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 RBM12B-AS1Q9P1G2 102 aa0.45□□□□□ -2.34
SMG1-212ENST00000566328 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
SMG1-212ENST00000566328 LOC110117498A0A087WWA1 95 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 MMP24-AS1A0A0U1RRL7 71 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 A0A1W2PPM0 123 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 hDV103S1A0JD37 113 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 HCG22E2RYF7 251 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 TSTD3H0UI37 97 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 NDUFB1O75438 58 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 MT1BP07438 61 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 H1FX-AS1Q4G0G2 97 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 LCA10Q71F78 164 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 PPDPFLQ8WWR9 84 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 MRPL34Q9BQ48 92 aaKnown RBP0.44□□□□□ -2.34
SMG1-212ENST00000566328 LINC00846Q9NV44 126 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 SS18L2Q9UHA2 77 aa0.44□□□□□ -2.34
SMG1-212ENST00000566328 FAM236AA0A1B0GUQ0 79 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 FAM236BA0A1B0GV22 79 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 A6NN06 94 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 C8orf87E5RJ46 101 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 KLKP1Q107X0 134 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 ETDBQ3ZM63 59 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 CASC2Q6XLA1 102 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 ADM2Q7Z4H4 148 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 SPCS1Q9Y6A9 102 aa0.43□□□□□ -2.34
SMG1-212ENST00000566328 JMJD7-PLA2G4BH0Y9G9 81 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 J3KT08 172 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 M0R143 59 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 HIST1H4AP62805 103 aaKnown RBP0.42□□□□□ -2.34
SMG1-212ENST00000566328 MT1XP80297 61 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 LINC01554Q52M75 96 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 Q5VV11 94 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 CSAG1Q6PB30 78 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 TMEM254Q8TBM7 123 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 SPRR2FQ96RM1 72 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 CYP4F30PQ9H0H9 118 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 S4R3F8 94 aa0.42□□□□□ -2.34
SMG1-212ENST00000566328 GPR98Q8WXG9 6306 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 A0A1B0GV90 55 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 H3BQ85 93 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 H3BT86 120 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 SMIM6P0DI80 62 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 PDE6GP18545 87 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 SPRR2EP22531 72 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 SPRR2BP35325 72 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 SPRR2AP35326 72 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 KRTAP19-8Q3LI54 63 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 KRTAP20-1Q3LI63 56 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 COL5A1-AS1Q5SY13 56 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 C7orf65Q6ZTY9 151 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 LINC00208Q96KT6 92 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 SPRR2GQ9BYE4 73 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 IMUPQ9GZP8 106 aa0.41□□□□□ -2.34
SMG1-212ENST00000566328 DSTQ03001 7570 aaKnown RBP0.4□□□□□ -2.35
SMG1-212ENST00000566328 A0A1B0GW54 56 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 F8W1H4 67 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 H0Y9P7 68 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 NDUFC1O43677 76 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 KRTAP2-3P0C7H8 128 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 KRTAP8-1Q8IUC2 63 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 PLAC4Q8WY50 150 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 KRTAP2-4Q9BYR9 128 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 UBL5Q9BZL1 73 aa0.4□□□□□ -2.35
SMG1-212ENST00000566328 TRAV22A0A0B4J277 110 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 M0QZ58 72 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 MT-ATP8P03928 68 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 ACYP1P07311 99 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 SCGB1A1P11684 91 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 SPRR2DP22532 72 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 GTF2H5Q6ZYL4 71 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms