RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NDUFB1O75438 58 aa3.17□□□□□ -1.9
VPS33B-207ENST00000557470 SPRR1AP35321 89 aa3.17□□□□□ -1.9
VPS33B-207ENST00000557470 NREPQ16612 68 aa3.17□□□□□ -1.9
VPS33B-207ENST00000557470 MIR7-3HGQ8N6C7 128 aa3.17□□□□□ -1.9
VPS33B-207ENST00000557470 CHKB-CPT1BH3BT56 60 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 NCR3O14931 201 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
VPS33B-207ENST00000557470 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
VPS33B-207ENST00000557470 SSBP3-AS1Q7Z2R9 100 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 ADM2Q7Z4H4 148 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 SPTSSBQ8NFR3 76 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 C14orf132Q9NPU4 83 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 ORMDL1Q9P0S3 153 aa3.16□□□□□ -1.9
VPS33B-207ENST00000557470 ETDCA0A1B0GVM5 59 aa3.15□□□□□ -1.91
VPS33B-207ENST00000557470 LINC00158P58513 81 aa3.15□□□□□ -1.91
VPS33B-207ENST00000557470 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
VPS33B-207ENST00000557470 C9orf92A6NGG3 77 aa3.14□□□□□ -1.91
VPS33B-207ENST00000557470 Q5VV11 94 aa3.14□□□□□ -1.91
VPS33B-207ENST00000557470 CASC2Q6XLA1 102 aa3.14□□□□□ -1.91
VPS33B-207ENST00000557470 Q9BRP9 147 aa3.14□□□□□ -1.91
VPS33B-207ENST00000557470 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
VPS33B-207ENST00000557470 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
VPS33B-207ENST00000557470 USH2AO75445 5202 aa3.12□□□□□ -1.91
VPS33B-207ENST00000557470 LOC110117498A0A087WWA1 95 aa3.12□□□□□ -1.91
VPS33B-207ENST00000557470 LOC101927531A0A1B0GV80 90 aa3.12□□□□□ -1.91
VPS33B-207ENST00000557470 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
VPS33B-207ENST00000557470 Q6ZRX8 168 aa3.12□□□□□ -1.91
VPS33B-207ENST00000557470 C1orf64Q8NEQ6 169 aa3.12□□□□□ -1.91
VPS33B-207ENST00000557470 LINC00308Q8TCZ7 52 aa3.12□□□□□ -1.91
VPS33B-207ENST00000557470 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
VPS33B-207ENST00000557470 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
VPS33B-207ENST00000557470 IGLV6-57P01721 117 aa3.1□□□□□ -1.91
VPS33B-207ENST00000557470 ST20-AS1Q8NBB2 130 aa3.1□□□□□ -1.91
VPS33B-207ENST00000557470 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
VPS33B-207ENST00000557470 A8MUU9 505 aa3.08□□□□□ -1.92
VPS33B-207ENST00000557470 Q5W150 140 aa3.08□□□□□ -1.92
VPS33B-207ENST00000557470 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
VPS33B-207ENST00000557470 RPL37P61927 97 aaKnown RBP3.07□□□□□ -1.92
VPS33B-207ENST00000557470 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
VPS33B-207ENST00000557470 H3BPC8 53 aa3.06□□□□□ -1.92
VPS33B-207ENST00000557470 Q6ZQT0 140 aa3.06□□□□□ -1.92
VPS33B-207ENST00000557470 SPRR1BP22528 89 aa3.05□□□□□ -1.92
VPS33B-207ENST00000557470 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
VPS33B-207ENST00000557470 SMIM11BQ8TCY0 68 aa3.04□□□□□ -1.92
VPS33B-207ENST00000557470 ZCCHC13Q8WW36 166 aaKnown RBP3.04□□□□□ -1.92
VPS33B-207ENST00000557470 LINC01558Q9Y6Z2 57 aa3.03□□□□□ -1.92
VPS33B-207ENST00000557470 A0A0G2JQZ4 141 aa3.01□□□□□ -1.93
VPS33B-207ENST00000557470 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
VPS33B-207ENST00000557470 DEFB105AQ8NG35 78 aa3□□□□□ -1.93
VPS33B-207ENST00000557470 MT2AP02795 61 aa2.99□□□□□ -1.93
VPS33B-207ENST00000557470 IGKV4-1P06312 121 aa2.99□□□□□ -1.93
VPS33B-207ENST00000557470 A8MU10 97 aa2.98□□□□□ -1.93
VPS33B-207ENST00000557470 COX7BP24311 80 aa2.98□□□□□ -1.93
VPS33B-207ENST00000557470 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
VPS33B-207ENST00000557470 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
VPS33B-207ENST00000557470 MT1FP04733 61 aa2.97□□□□□ -1.93
VPS33B-207ENST00000557470 A0A1B0GU33 70 aa2.96□□□□□ -1.94
VPS33B-207ENST00000557470 H0Y9P7 68 aa2.96□□□□□ -1.94
VPS33B-207ENST00000557470 ROMO1P60602 79 aa2.96□□□□□ -1.94
VPS33B-207ENST00000557470 IGLV5-48A0A075B6I7 105 aa2.95□□□□□ -1.94
VPS33B-207ENST00000557470 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.95□□□□□ -1.94
VPS33B-207ENST00000557470 LINC00575Q6W349 94 aa2.95□□□□□ -1.94
VPS33B-207ENST00000557470 KRTAP10-10P60014 251 aa2.94□□□□□ -1.94
VPS33B-207ENST00000557470 COA5Q86WW8 74 aa2.93□□□□□ -1.94
VPS33B-207ENST00000557470 A0A1W2PNM2 257 aa2.92□□□□□ -1.94
VPS33B-207ENST00000557470 Q96NJ1 140 aa2.92□□□□□ -1.94
VPS33B-207ENST00000557470 A0A087WSZ3 146 aa2.91□□□□□ -1.94
VPS33B-207ENST00000557470 MT3P25713 68 aa2.91□□□□□ -1.94
VPS33B-207ENST00000557470 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
VPS33B-207ENST00000557470 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
VPS33B-207ENST00000557470 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
VPS33B-207ENST00000557470 CSAG1Q6PB30 78 aa2.91□□□□□ -1.94
VPS33B-207ENST00000557470 C20orf166-AS1Q96NR2 134 aa2.91□□□□□ -1.94
VPS33B-207ENST00000557470 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
VPS33B-207ENST00000557470 IGFL1Q6UW32 110 aa2.9□□□□□ -1.95
VPS33B-207ENST00000557470 Q6ZQY7 126 aa2.9□□□□□ -1.95
VPS33B-207ENST00000557470 UQCR11O14957 56 aa2.89□□□□□ -1.95
VPS33B-207ENST00000557470 SPINK7P58062 85 aa2.89□□□□□ -1.95
VPS33B-207ENST00000557470 SPATA8Q6RVD6 105 aa2.89□□□□□ -1.95
VPS33B-207ENST00000557470 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
VPS33B-207ENST00000557470 DMAC1Q96GE9 116 aa2.87□□□□□ -1.95
VPS33B-207ENST00000557470 HRES1P13985 223 aa2.86□□□□□ -1.95
VPS33B-207ENST00000557470 Q8N9L7 120 aa2.85□□□□□ -1.95
VPS33B-207ENST00000557470 DSCR10P59022 87 aa2.84□□□□□ -1.95
VPS33B-207ENST00000557470 R4GN34 69 aa2.84□□□□□ -1.95
VPS33B-207ENST00000557470 NEBP20929 6669 aa2.84□□□□□ -1.96
VPS33B-207ENST00000557470 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
VPS33B-207ENST00000557470 A0A1B0GU69 56 aa2.8□□□□□ -1.96
VPS33B-207ENST00000557470 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
VPS33B-207ENST00000557470 K7EQZ3 153 aa2.78□□□□□ -1.96
VPS33B-207ENST00000557470 ACYP2P14621 99 aa2.78□□□□□ -1.96
VPS33B-207ENST00000557470 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
VPS33B-207ENST00000557470 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
VPS33B-207ENST00000557470 P0C880 135 aa2.77□□□□□ -1.97
VPS33B-207ENST00000557470 WFDC13Q8IUB5 93 aa2.74□□□□□ -1.97
VPS33B-207ENST00000557470 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
VPS33B-207ENST00000557470 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
VPS33B-207ENST00000557470 LINC00472Q9H8W2 130 aa2.73□□□□□ -1.97
VPS33B-207ENST00000557470 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms