RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 DEFB114Q30KQ6 69 aa1.57□□□□□ -2.16
SRP54-209ENST00000555746 C5orf56Q8N8D9 126 aa1.57□□□□□ -2.16
SRP54-209ENST00000555746 ZNF625Q96I27 306 aaPredicted RBP1.57□□□□□ -2.16
SRP54-209ENST00000555746 KRTAP2-4Q9BYR9 128 aa1.57□□□□□ -2.16
SRP54-209ENST00000555746 TMEM167BQ9NRX6 74 aa1.57□□□□□ -2.16
SRP54-209ENST00000555746 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.56□□□□□ -2.16
SRP54-209ENST00000555746 A0A0G2JQZ4 141 aa1.56□□□□□ -2.16
SRP54-209ENST00000555746 IGKV2-29A2NJV5 120 aaPredicted RBP1.56□□□□□ -2.16
SRP54-209ENST00000555746 H0YGX0 51 aa1.56□□□□□ -2.16
SRP54-209ENST00000555746 NDUFA3O95167 84 aa1.56□□□□□ -2.16
SRP54-209ENST00000555746 IGLV6-57P01721 117 aa1.56□□□□□ -2.16
SRP54-209ENST00000555746 HRES1P13985 223 aa1.56□□□□□ -2.16
SRP54-209ENST00000555746 PIGYQ3MUY2 71 aa1.56□□□□□ -2.16
SRP54-209ENST00000555746 LINC01590Q5TEZ4 76 aa1.56□□□□□ -2.16
SRP54-209ENST00000555746 TRGV1A0A0A0MS02 117 aa1.55□□□□□ -2.16
SRP54-209ENST00000555746 A0A1B0GU69 56 aa1.55□□□□□ -2.16
SRP54-209ENST00000555746 KRTAP10-4P60372 401 aaPredicted RBP1.55□□□□□ -2.16
SRP54-209ENST00000555746 HAMPP81172 84 aa1.55□□□□□ -2.16
SRP54-209ENST00000555746 C10orf55Q5SWW7 151 aa1.55□□□□□ -2.16
SRP54-209ENST00000555746 COA5Q86WW8 74 aa1.55□□□□□ -2.16
SRP54-209ENST00000555746 KMT2DO14686 5537 aa1.55□□□□□ -2.16
SRP54-209ENST00000555746 TRGV2A0A075B6R0 118 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 LOC110117498A0A087WWA1 95 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 DEFB4AO15263 64 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 ACYP2P14621 99 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 COX7BP24311 80 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 RPL39P5Q59GN2 51 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 Q96NJ1 140 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 LINC00472Q9H8W2 130 aa1.54□□□□□ -2.16
SRP54-209ENST00000555746 USH2AO75445 5202 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 LINC00959A0A1B0GUT2 108 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 ETDCA0A1B0GVM5 59 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 FXYD4P59646 89 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 TPRXLQ17RH7 258 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 DEFB135Q30KP9 77 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 SPACA4Q8TDM5 124 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 KCNQ1DNQ9H478 68 aa1.53□□□□□ -2.16
SRP54-209ENST00000555746 NCR3O14931 201 aa1.52□□□□□ -2.17
SRP54-209ENST00000555746 HTN3P15516 51 aa1.52□□□□□ -2.17
SRP54-209ENST00000555746 KRTAP13-1Q8IUC0 172 aa1.52□□□□□ -2.17
SRP54-209ENST00000555746 UBE2DNLQ8IWF7 75 aa1.52□□□□□ -2.17
SRP54-209ENST00000555746 INE1O15225 51 aa1.51□□□□□ -2.17
SRP54-209ENST00000555746 USMG5Q96IX5 58 aa1.51□□□□□ -2.17
SRP54-209ENST00000555746 MUC12Q9UKN1 5478 aa1.51□□□□□ -2.17
SRP54-209ENST00000555746 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
SRP54-209ENST00000555746 H3BRN7 92 aa1.5□□□□□ -2.17
SRP54-209ENST00000555746 H3BUA1 57 aa1.49□□□□□ -2.17
SRP54-209ENST00000555746 DEFB131AP59861 70 aa1.49□□□□□ -2.17
SRP54-209ENST00000555746 Q6ZQY7 126 aa1.49□□□□□ -2.17
SRP54-209ENST00000555746 ARHGAP5-AS1Q96IT6 56 aa1.49□□□□□ -2.17
SRP54-209ENST00000555746 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
SRP54-209ENST00000555746 DEFB131BA0A096LNP1 70 aa1.48□□□□□ -2.17
SRP54-209ENST00000555746 HTN1P15515 57 aa1.48□□□□□ -2.17
SRP54-209ENST00000555746 SPINK9Q5DT21 86 aa1.48□□□□□ -2.17
SRP54-209ENST00000555746 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.48□□□□□ -2.17
SRP54-209ENST00000555746 SMIM2Q9BVW6 85 aa1.48□□□□□ -2.17
SRP54-209ENST00000555746 RHPN1-AS1Q9BWJ2 59 aa1.48□□□□□ -2.17
SRP54-209ENST00000555746 DEFB130BP0DP73 79 aa1.47□□□□□ -2.17
SRP54-209ENST00000555746 DEFB130AP0DP74 79 aa1.47□□□□□ -2.17
SRP54-209ENST00000555746 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
SRP54-209ENST00000555746 SPART-AS1P0CW21 52 aa1.46□□□□□ -2.18
SRP54-209ENST00000555746 IAPPP10997 89 aa1.46□□□□□ -2.18
SRP54-209ENST00000555746 TMEM167AQ8TBQ9 72 aa1.46□□□□□ -2.18
SRP54-209ENST00000555746 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
SRP54-209ENST00000555746 LINC00158P58513 81 aa1.45□□□□□ -2.18
SRP54-209ENST00000555746 DEFB1P60022 68 aa1.45□□□□□ -2.18
SRP54-209ENST00000555746 Q6ZRX8 168 aa1.45□□□□□ -2.18
SRP54-209ENST00000555746 Q6ZSA8 131 aa1.45□□□□□ -2.18
SRP54-209ENST00000555746 LINC00308Q8TCZ7 52 aa1.45□□□□□ -2.18
SRP54-209ENST00000555746 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
SRP54-209ENST00000555746 CNFNQ9BYD5 112 aa1.45□□□□□ -2.18
SRP54-209ENST00000555746 K7EIM0 57 aa1.44□□□□□ -2.18
SRP54-209ENST00000555746 NDUFA1O15239 70 aa1.44□□□□□ -2.18
SRP54-209ENST00000555746 WT1-ASQ06250 92 aa1.44□□□□□ -2.18
SRP54-209ENST00000555746 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
SRP54-209ENST00000555746 A0A096LPF7 62 aa1.43□□□□□ -2.18
SRP54-209ENST00000555746 ANGP03950 147 aaKnown RBP1.43□□□□□ -2.18
SRP54-209ENST00000555746 CRIP1P50238 77 aa1.43□□□□□ -2.18
SRP54-209ENST00000555746 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
SRP54-209ENST00000555746 Q6ZRN7 208 aaPredicted RBP1.43□□□□□ -2.18
SRP54-209ENST00000555746 NOP10Q9NPE3 64 aaKnown RBP1.43□□□□□ -2.18
SRP54-209ENST00000555746 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
SRP54-209ENST00000555746 GVQW2A0A096LPI5 108 aaPredicted RBP1.42□□□□□ -2.18
SRP54-209ENST00000555746 I3L2K1 104 aa1.42□□□□□ -2.18
SRP54-209ENST00000555746 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
SRP54-209ENST00000555746 SPINK13Q1W4C9 94 aa1.42□□□□□ -2.18
SRP54-209ENST00000555746 Q8IZM0 81 aa1.42□□□□□ -2.18
SRP54-209ENST00000555746 CDKN2A-AS1Q9UH64 79 aa1.42□□□□□ -2.18
SRP54-209ENST00000555746 MUC17Q685J3 4493 aa1.42□□□□□ -2.18
SRP54-209ENST00000555746 MT1HP80294 61 aa1.41□□□□□ -2.18
SRP54-209ENST00000555746 PRCDQ00LT1 54 aa1.41□□□□□ -2.18
SRP54-209ENST00000555746 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
SRP54-209ENST00000555746 KLK9Q2XQG4 91 aa1.39□□□□□ -2.19
SRP54-209ENST00000555746 KRTAP19-6Q3LI70 58 aa1.39□□□□□ -2.19
SRP54-209ENST00000555746 CRIPTQ9P021 101 aa1.39□□□□□ -2.19
SRP54-209ENST00000555746 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
SRP54-209ENST00000555746 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
SRP54-209ENST00000555746 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
SRP54-209ENST00000555746 LINC00575Q6W349 94 aa1.37□□□□□ -2.19
SRP54-209ENST00000555746 WFDC10BQ8IUB3 73 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms