RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PDE6GP18545 87 aa2.03□□□□□ -2.08
VTI1B-203ENST00000554636 BATFQ16520 125 aa2.03□□□□□ -2.08
VTI1B-203ENST00000554636 MTURNQ8N3F0 131 aa2.03□□□□□ -2.08
VTI1B-203ENST00000554636 RBM12B-AS1Q9P1G2 102 aa2.03□□□□□ -2.08
VTI1B-203ENST00000554636 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.09
VTI1B-203ENST00000554636 MMP24-AS1A0A0U1RRL7 71 aa2.02□□□□□ -2.09
VTI1B-203ENST00000554636 A0A1W2PPM0 123 aa2.02□□□□□ -2.09
VTI1B-203ENST00000554636 H3BT86 120 aa2.02□□□□□ -2.09
VTI1B-203ENST00000554636 SCGB1A1P11684 91 aa2.02□□□□□ -2.09
VTI1B-203ENST00000554636 SPINK7P58062 85 aa2.02□□□□□ -2.09
VTI1B-203ENST00000554636 PRR15Q8IV56 129 aa2.02□□□□□ -2.09
VTI1B-203ENST00000554636 K7EQZ3 153 aa2.01□□□□□ -2.09
VTI1B-203ENST00000554636 NREPQ16612 68 aa2.01□□□□□ -2.09
VTI1B-203ENST00000554636 Q8N9L7 120 aa2.01□□□□□ -2.09
VTI1B-203ENST00000554636 TMEM254Q8TBM7 123 aa2.01□□□□□ -2.09
VTI1B-203ENST00000554636 MRPL34Q9BQ48 92 aaKnown RBP2.01□□□□□ -2.09
VTI1B-203ENST00000554636 V9GYY9 64 aa2.01□□□□□ -2.09
VTI1B-203ENST00000554636 WFDC13Q8IUB5 93 aa2□□□□□ -2.09
VTI1B-203ENST00000554636 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
VTI1B-203ENST00000554636 hDV103S1A0JD37 113 aa1.99□□□□□ -2.09
VTI1B-203ENST00000554636 SPCS1Q9Y6A9 102 aa1.99□□□□□ -2.09
VTI1B-203ENST00000554636 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
VTI1B-203ENST00000554636 BPY2O14599 106 aa1.98□□□□□ -2.09
VTI1B-203ENST00000554636 K7EP34 96 aa1.97□□□□□ -2.09
VTI1B-203ENST00000554636 KRTAP10-10P60014 251 aa1.97□□□□□ -2.09
VTI1B-203ENST00000554636 Q5W150 140 aa1.97□□□□□ -2.09
VTI1B-203ENST00000554636 NDUFS5O43920 106 aa1.96□□□□□ -2.1
VTI1B-203ENST00000554636 COL5A1-AS1Q5SY13 56 aa1.96□□□□□ -2.1
VTI1B-203ENST00000554636 C7orf65Q6ZTY9 151 aa1.96□□□□□ -2.1
VTI1B-203ENST00000554636 LINC00846Q9NV44 126 aa1.96□□□□□ -2.1
VTI1B-203ENST00000554636 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
VTI1B-203ENST00000554636 HCG22E2RYF7 251 aa1.95□□□□□ -2.1
VTI1B-203ENST00000554636 K7ERU9 68 aa1.95□□□□□ -2.1
VTI1B-203ENST00000554636 H1FX-AS1Q4G0G2 97 aa1.95□□□□□ -2.1
VTI1B-203ENST00000554636 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
VTI1B-203ENST00000554636 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
VTI1B-203ENST00000554636 UBL5Q9BZL1 73 aa1.93□□□□□ -2.1
VTI1B-203ENST00000554636 C4orf26Q17RF5 130 aa1.92□□□□□ -2.1
VTI1B-203ENST00000554636 NEBP20929 6669 aa1.91□□□□□ -2.1
VTI1B-203ENST00000554636 ETDBQ3ZM63 59 aa1.91□□□□□ -2.1
VTI1B-203ENST00000554636 GTF2H5Q6ZYL4 71 aa1.91□□□□□ -2.1
VTI1B-203ENST00000554636 SMIM20Q8N5G0 67 aa1.91□□□□□ -2.1
VTI1B-203ENST00000554636 F8W1H4 67 aa1.9□□□□□ -2.11
VTI1B-203ENST00000554636 TP53AIP1Q9HCN2 124 aa1.89□□□□□ -2.11
VTI1B-203ENST00000554636 S4R3F8 94 aa1.89□□□□□ -2.11
VTI1B-203ENST00000554636 FAM240AA0A1B0GVK7 77 aa1.88□□□□□ -2.11
VTI1B-203ENST00000554636 LCA10Q71F78 164 aa1.88□□□□□ -2.11
VTI1B-203ENST00000554636 C1orf64Q8NEQ6 169 aa1.88□□□□□ -2.11
VTI1B-203ENST00000554636 MT1BP07438 61 aa1.87□□□□□ -2.11
VTI1B-203ENST00000554636 RPS28P62857 69 aaKnown RBP1.86□□□□□ -2.11
VTI1B-203ENST00000554636 KRTAP19-8Q3LI54 63 aa1.86□□□□□ -2.11
VTI1B-203ENST00000554636 CYP4F30PQ9H0H9 118 aa1.86□□□□□ -2.11
VTI1B-203ENST00000554636 PRO0628Q9UI54 55 aa1.86□□□□□ -2.11
VTI1B-203ENST00000554636 A0A087WVE0 104 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 TRAV22A0A0B4J277 110 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 FAM236AA0A1B0GUQ0 79 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 FAM236BA0A1B0GV22 79 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 LOC101927531A0A1B0GV80 90 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 ACYP1P07311 99 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 ATP5EP2Q5VTU8 51 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 CSAG1Q6PB30 78 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 SPRR2GQ9BYE4 73 aa1.85□□□□□ -2.11
VTI1B-203ENST00000554636 UQCRQO14949 82 aa1.84□□□□□ -2.11
VTI1B-203ENST00000554636 KLKP1Q107X0 134 aa1.84□□□□□ -2.11
VTI1B-203ENST00000554636 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.12
VTI1B-203ENST00000554636 H0Y9P7 68 aa1.83□□□□□ -2.12
VTI1B-203ENST00000554636 J3QR89 54 aa1.83□□□□□ -2.12
VTI1B-203ENST00000554636 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
VTI1B-203ENST00000554636 Q5VV11 94 aa1.83□□□□□ -2.12
VTI1B-203ENST00000554636 ANAPC13Q9BS18 74 aa1.83□□□□□ -2.12
VTI1B-203ENST00000554636 HIST1H4AP62805 103 aaKnown RBP1.82□□□□□ -2.12
VTI1B-203ENST00000554636 LINC00643Q86TS7 51 aa1.82□□□□□ -2.12
VTI1B-203ENST00000554636 A6NN06 94 aa1.81□□□□□ -2.12
VTI1B-203ENST00000554636 ATOX1O00244 68 aa1.81□□□□□ -2.12
VTI1B-203ENST00000554636 CCDC179H3BU77 68 aa1.8□□□□□ -2.12
VTI1B-203ENST00000554636 CRIPTQ9P021 101 aa1.8□□□□□ -2.12
VTI1B-203ENST00000554636 A8MUN3 132 aa1.79□□□□□ -2.12
VTI1B-203ENST00000554636 H0YAA0 97 aa1.79□□□□□ -2.12
VTI1B-203ENST00000554636 IMUPQ9GZP8 106 aa1.79□□□□□ -2.12
VTI1B-203ENST00000554636 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
VTI1B-203ENST00000554636 NDUFC1O43677 76 aa1.78□□□□□ -2.12
VTI1B-203ENST00000554636 PMAIP1Q13794 54 aa1.78□□□□□ -2.12
VTI1B-203ENST00000554636 LINC00208Q96KT6 92 aa1.78□□□□□ -2.12
VTI1B-203ENST00000554636 MT-ATP8P03928 68 aa1.77□□□□□ -2.13
VTI1B-203ENST00000554636 MP68P56378 58 aa1.77□□□□□ -2.13
VTI1B-203ENST00000554636 ADM2Q7Z4H4 148 aa1.77□□□□□ -2.13
VTI1B-203ENST00000554636 MDN1Q9NU22 5596 aa1.76□□□□□ -2.13
VTI1B-203ENST00000554636 PSPHP1O15172 72 aa1.76□□□□□ -2.13
VTI1B-203ENST00000554636 DMAC1Q96GE9 116 aa1.76□□□□□ -2.13
VTI1B-203ENST00000554636 KMT2DO14686 5537 aa1.76□□□□□ -2.13
VTI1B-203ENST00000554636 H3BPC8 53 aa1.75□□□□□ -2.13
VTI1B-203ENST00000554636 SMIM26A0A096LP01 95 aa1.74□□□□□ -2.13
VTI1B-203ENST00000554636 P0C880 135 aa1.74□□□□□ -2.13
VTI1B-203ENST00000554636 TMEM258P61165 79 aa1.74□□□□□ -2.13
VTI1B-203ENST00000554636 MT1XP80297 61 aa1.74□□□□□ -2.13
VTI1B-203ENST00000554636 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
VTI1B-203ENST00000554636 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
VTI1B-203ENST00000554636 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
VTI1B-203ENST00000554636 C20orf197Q8N268 126 aa1.71□□□□□ -2.14
VTI1B-203ENST00000554636 TRAV7A0A075B6U4 112 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms