RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
ACTN1-210ENST00000553779 LOC101927531A0A1B0GV80 90 aa4.94□□□□□ -1.62
ACTN1-210ENST00000553779 LINC00208Q96KT6 92 aa4.94□□□□□ -1.62
ACTN1-210ENST00000553779 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
ACTN1-210ENST00000553779 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
ACTN1-210ENST00000553779 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
ACTN1-210ENST00000553779 K7EQZ3 153 aa4.92□□□□□ -1.62
ACTN1-210ENST00000553779 MT1FP04733 61 aa4.92□□□□□ -1.62
ACTN1-210ENST00000553779 HRES1P13985 223 aa4.92□□□□□ -1.62
ACTN1-210ENST00000553779 Q5VV11 94 aa4.92□□□□□ -1.62
ACTN1-210ENST00000553779 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
ACTN1-210ENST00000553779 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
ACTN1-210ENST00000553779 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
ACTN1-210ENST00000553779 PSPHP1O15172 72 aa4.91□□□□□ -1.62
ACTN1-210ENST00000553779 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
ACTN1-210ENST00000553779 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
ACTN1-210ENST00000553779 A0A1B0GVX0 72 aa4.9□□□□□ -1.63
ACTN1-210ENST00000553779 A8MUN3 132 aa4.9□□□□□ -1.63
ACTN1-210ENST00000553779 CHKB-CPT1BH3BT56 60 aa4.9□□□□□ -1.63
ACTN1-210ENST00000553779 H0Y9P7 68 aa4.89□□□□□ -1.63
ACTN1-210ENST00000553779 LINC00472Q9H8W2 130 aa4.89□□□□□ -1.63
ACTN1-210ENST00000553779 CASC2Q6XLA1 102 aa4.88□□□□□ -1.63
ACTN1-210ENST00000553779 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
ACTN1-210ENST00000553779 A8MWP4 228 aa4.87□□□□□ -1.63
ACTN1-210ENST00000553779 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
ACTN1-210ENST00000553779 SPINK7P58062 85 aa4.85□□□□□ -1.63
ACTN1-210ENST00000553779 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
ACTN1-210ENST00000553779 WFDC13Q8IUB5 93 aa4.84□□□□□ -1.63
ACTN1-210ENST00000553779 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
ACTN1-210ENST00000553779 A6NED7 52 aa4.83□□□□□ -1.64
ACTN1-210ENST00000553779 COA5Q86WW8 74 aa4.82□□□□□ -1.64
ACTN1-210ENST00000553779 A6NN06 94 aa4.81□□□□□ -1.64
ACTN1-210ENST00000553779 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
ACTN1-210ENST00000553779 LCA10Q71F78 164 aa4.8□□□□□ -1.64
ACTN1-210ENST00000553779 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
ACTN1-210ENST00000553779 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
ACTN1-210ENST00000553779 C8orf17Q9NRJ1 99 aa4.77□□□□□ -1.65
ACTN1-210ENST00000553779 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
ACTN1-210ENST00000553779 MMP24-AS1A0A0U1RRL7 71 aa4.76□□□□□ -1.65
ACTN1-210ENST00000553779 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
ACTN1-210ENST00000553779 ACYP2P14621 99 aa4.72□□□□□ -1.65
ACTN1-210ENST00000553779 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
ACTN1-210ENST00000553779 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
ACTN1-210ENST00000553779 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
ACTN1-210ENST00000553779 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
ACTN1-210ENST00000553779 A8MU10 97 aa4.66□□□□□ -1.66
ACTN1-210ENST00000553779 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
ACTN1-210ENST00000553779 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
ACTN1-210ENST00000553779 DMAC1Q96GE9 116 aa4.61□□□□□ -1.67
ACTN1-210ENST00000553779 UQCR11O14957 56 aa4.6□□□□□ -1.67
ACTN1-210ENST00000553779 A0A1B0GU69 56 aa4.59□□□□□ -1.67
ACTN1-210ENST00000553779 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
ACTN1-210ENST00000553779 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
ACTN1-210ENST00000553779 Q5W150 140 aa4.55□□□□□ -1.68
ACTN1-210ENST00000553779 S4R3F8 94 aa4.55□□□□□ -1.68
ACTN1-210ENST00000553779 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
ACTN1-210ENST00000553779 NEBP20929 6669 aa4.51□□□□□ -1.69
ACTN1-210ENST00000553779 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
ACTN1-210ENST00000553779 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
ACTN1-210ENST00000553779 MT1BP07438 61 aa4.43□□□□□ -1.7
ACTN1-210ENST00000553779 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
ACTN1-210ENST00000553779 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
ACTN1-210ENST00000553779 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
ACTN1-210ENST00000553779 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
ACTN1-210ENST00000553779 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
ACTN1-210ENST00000553779 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
ACTN1-210ENST00000553779 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
ACTN1-210ENST00000553779 H3BS24 57 aa4.35□□□□□ -1.71
ACTN1-210ENST00000553779 K7ERS5 55 aa4.35□□□□□ -1.71
ACTN1-210ENST00000553779 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
ACTN1-210ENST00000553779 MDN1Q9NU22 5596 aa4.32□□□□□ -1.72
ACTN1-210ENST00000553779 KMT2DO14686 5537 aa4.32□□□□□ -1.72
ACTN1-210ENST00000553779 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
ACTN1-210ENST00000553779 A0A1B0GU33 70 aa4.29□□□□□ -1.72
ACTN1-210ENST00000553779 ROMO1P60602 79 aa4.28□□□□□ -1.72
ACTN1-210ENST00000553779 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
ACTN1-210ENST00000553779 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
ACTN1-210ENST00000553779 SPRR2EP22531 72 aa4.25□□□□□ -1.73
ACTN1-210ENST00000553779 SPRR2BP35325 72 aa4.25□□□□□ -1.73
ACTN1-210ENST00000553779 SPRR2AP35326 72 aa4.25□□□□□ -1.73
ACTN1-210ENST00000553779 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
ACTN1-210ENST00000553779 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
ACTN1-210ENST00000553779 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
ACTN1-210ENST00000553779 H0YAA0 97 aa4.22□□□□□ -1.73
ACTN1-210ENST00000553779 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
ACTN1-210ENST00000553779 R4GN34 69 aa4.18□□□□□ -1.74
ACTN1-210ENST00000553779 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
ACTN1-210ENST00000553779 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
ACTN1-210ENST00000553779 M0QZ58 72 aa4.14□□□□□ -1.75
ACTN1-210ENST00000553779 MT1XP80297 61 aa4.14□□□□□ -1.75
ACTN1-210ENST00000553779 SPRR2DP22532 72 aa4.11□□□□□ -1.75
ACTN1-210ENST00000553779 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
ACTN1-210ENST00000553779 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
ACTN1-210ENST00000553779 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
ACTN1-210ENST00000553779 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
ACTN1-210ENST00000553779 P0C880 135 aa4.06□□□□□ -1.76
ACTN1-210ENST00000553779 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
ACTN1-210ENST00000553779 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
ACTN1-210ENST00000553779 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
ACTN1-210ENST00000553779 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms