RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ACYP1P07311 99 aa1.18□□□□□ -2.22
SCAF11-210ENST00000547654 NMSQ5H8A3 153 aa1.18□□□□□ -2.22
SCAF11-210ENST00000547654 IQCF6A8MYZ5 107 aa1.17□□□□□ -2.22
SCAF11-210ENST00000547654 IFI6P09912 130 aa1.17□□□□□ -2.22
SCAF11-210ENST00000547654 DEFB114Q30KQ6 69 aa1.17□□□□□ -2.22
SCAF11-210ENST00000547654 LINC00643Q86TS7 51 aa1.17□□□□□ -2.22
SCAF11-210ENST00000547654 ST20Q9HBF5 79 aa1.17□□□□□ -2.22
SCAF11-210ENST00000547654 WFDC2Q14508 124 aa1.16□□□□□ -2.22
SCAF11-210ENST00000547654 CNFNQ9BYD5 112 aa1.16□□□□□ -2.22
SCAF11-210ENST00000547654 A0A1B0GU69 56 aa1.14□□□□□ -2.23
SCAF11-210ENST00000547654 C6orf201Q7Z4U5 140 aa1.14□□□□□ -2.23
SCAF11-210ENST00000547654 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
SCAF11-210ENST00000547654 MYMXA0A1B0GTQ4 84 aa1.13□□□□□ -2.23
SCAF11-210ENST00000547654 PLGLAQ15195 96 aa1.13□□□□□ -2.23
SCAF11-210ENST00000547654 TP53AIP1Q9HCN2 124 aa1.13□□□□□ -2.23
SCAF11-210ENST00000547654 TRBV7-4A0A0J9YYF1 115 aa1.12□□□□□ -2.23
SCAF11-210ENST00000547654 HTN3P15516 51 aa1.12□□□□□ -2.23
SCAF11-210ENST00000547654 DEFA5Q01523 94 aa1.12□□□□□ -2.23
SCAF11-210ENST00000547654 PIGYQ3MUY2 71 aa1.12□□□□□ -2.23
SCAF11-210ENST00000547654 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
SCAF11-210ENST00000547654 SPRR2EP22531 72 aa1.11□□□□□ -2.23
SCAF11-210ENST00000547654 SPRR2BP35325 72 aa1.11□□□□□ -2.23
SCAF11-210ENST00000547654 SPRR2AP35326 72 aa1.11□□□□□ -2.23
SCAF11-210ENST00000547654 PLAC8Q9NZF1 115 aa1.11□□□□□ -2.23
SCAF11-210ENST00000547654 CEBPZOSA8MTT3 80 aa1.1□□□□□ -2.23
SCAF11-210ENST00000547654 IGLC3P0DOY3 106 aa1.1□□□□□ -2.23
SCAF11-210ENST00000547654 UBE2D4Q9Y2X8 147 aa1.1□□□□□ -2.23
SCAF11-210ENST00000547654 M0R2T5 61 aa1.09□□□□□ -2.23
SCAF11-210ENST00000547654 SPART-AS1P0CW21 52 aa1.09□□□□□ -2.23
SCAF11-210ENST00000547654 IGLC2P0DOY2 106 aa1.09□□□□□ -2.23
SCAF11-210ENST00000547654 HEPN1Q6WQI6 88 aa1.09□□□□□ -2.23
SCAF11-210ENST00000547654 LINC00959A0A1B0GUT2 108 aa1.08□□□□□ -2.24
SCAF11-210ENST00000547654 A0A1B0GUT8 65 aa1.08□□□□□ -2.24
SCAF11-210ENST00000547654 MT1FP04733 61 aa1.08□□□□□ -2.24
SCAF11-210ENST00000547654 SPRR2DP22532 72 aa1.08□□□□□ -2.24
SCAF11-210ENST00000547654 FXYD6-FXYD2A0A087WZ82 144 aa1.07□□□□□ -2.24
SCAF11-210ENST00000547654 H3BUA1 57 aa1.07□□□□□ -2.24
SCAF11-210ENST00000547654 NDUFA3O95167 84 aa1.07□□□□□ -2.24
SCAF11-210ENST00000547654 MT2AP02795 61 aa1.07□□□□□ -2.24
SCAF11-210ENST00000547654 SPINK6Q6UWN8 80 aa1.07□□□□□ -2.24
SCAF11-210ENST00000547654 Q8IZM0 81 aa1.07□□□□□ -2.24
SCAF11-210ENST00000547654 H3BUT2 72 aa1.06□□□□□ -2.24
SCAF11-210ENST00000547654 RPS27LQ71UM5 84 aaKnown RBP1.06□□□□□ -2.24
SCAF11-210ENST00000547654 LEAP2Q969E1 77 aa1.06□□□□□ -2.24
SCAF11-210ENST00000547654 I3L2K1 104 aa1.05□□□□□ -2.24
SCAF11-210ENST00000547654 BVES-AS1Q5T3Y7 98 aa1.04□□□□□ -2.24
SCAF11-210ENST00000547654 WFDC10BQ8IUB3 73 aa1.04□□□□□ -2.24
SCAF11-210ENST00000547654 USMG5Q96IX5 58 aa1.04□□□□□ -2.24
SCAF11-210ENST00000547654 A0A096LPF7 62 aa1.03□□□□□ -2.24
SCAF11-210ENST00000547654 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
SCAF11-210ENST00000547654 H3BNG1 76 aa1.02□□□□□ -2.25
SCAF11-210ENST00000547654 PRH1P02810 166 aa1.02□□□□□ -2.25
SCAF11-210ENST00000547654 DEFB131AP59861 70 aa1.02□□□□□ -2.25
SCAF11-210ENST00000547654 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
SCAF11-210ENST00000547654 DEFB130BP0DP73 79 aa1.01□□□□□ -2.25
SCAF11-210ENST00000547654 DEFB130AP0DP74 79 aa1.01□□□□□ -2.25
SCAF11-210ENST00000547654 NDUFB1O75438 58 aa1□□□□□ -2.25
SCAF11-210ENST00000547654 APELAP0DMC3 54 aa1□□□□□ -2.25
SCAF11-210ENST00000547654 C18orf32Q8TCD1 76 aa1□□□□□ -2.25
SCAF11-210ENST00000547654 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
SCAF11-210ENST00000547654 CFDP00746 253 aaPredicted RBP0.99□□□□□ -2.25
SCAF11-210ENST00000547654 COX8AP10176 69 aa0.99□□□□□ -2.25
SCAF11-210ENST00000547654 RPL38P63173 70 aaKnown RBP0.99□□□□□ -2.25
SCAF11-210ENST00000547654 A0A087WXM4 84 aa0.98□□□□□ -2.25
SCAF11-210ENST00000547654 SMIM13P0DJ93 91 aa0.98□□□□□ -2.25
SCAF11-210ENST00000547654 RPS27P42677 84 aaKnown RBP0.98□□□□□ -2.25
SCAF11-210ENST00000547654 KLK9Q2XQG4 91 aa0.98□□□□□ -2.25
SCAF11-210ENST00000547654 LINC01556Q5JQF7 62 aa0.98□□□□□ -2.25
SCAF11-210ENST00000547654 TRAV21A0A0B4J279 112 aa0.97□□□□□ -2.25
SCAF11-210ENST00000547654 I3L3M4 83 aa0.97□□□□□ -2.25
SCAF11-210ENST00000547654 K7EQZ3 153 aa0.97□□□□□ -2.25
SCAF11-210ENST00000547654 MT4P47944 62 aa0.97□□□□□ -2.25
SCAF11-210ENST00000547654 ATP5EP2Q5VTU8 51 aa0.97□□□□□ -2.25
SCAF11-210ENST00000547654 COX6B2Q6YFQ2 88 aa0.97□□□□□ -2.25
SCAF11-210ENST00000547654 RHPN1-AS1Q9BWJ2 59 aa0.97□□□□□ -2.25
SCAF11-210ENST00000547654 CPSF4LA6NMK7 179 aaKnown RBP0.96□□□□□ -2.26
SCAF11-210ENST00000547654 NDUFA4O00483 81 aa0.96□□□□□ -2.26
SCAF11-210ENST00000547654 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
SCAF11-210ENST00000547654 SMCO4Q9NRQ5 59 aa0.96□□□□□ -2.26
SCAF11-210ENST00000547654 COX7BP24311 80 aa0.95□□□□□ -2.26
SCAF11-210ENST00000547654 DEFB1P60022 68 aa0.95□□□□□ -2.26
SCAF11-210ENST00000547654 RPL39P5Q59GN2 51 aa0.94□□□□□ -2.26
SCAF11-210ENST00000547654 NOP10Q9NPE3 64 aaKnown RBP0.94□□□□□ -2.26
SCAF11-210ENST00000547654 A8MTW9 85 aa0.93□□□□□ -2.26
SCAF11-210ENST00000547654 UMAD1C9J7I0 102 aa0.93□□□□□ -2.26
SCAF11-210ENST00000547654 PDCD5O14737 125 aa0.93□□□□□ -2.26
SCAF11-210ENST00000547654 TIMM8BQ9Y5J9 83 aaPredicted RBP0.93□□□□□ -2.26
SCAF11-210ENST00000547654 IFI27P40305 119 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-210ENST00000547654 Q5BKY6 102 aa0.92□□□□□ -2.26
SCAF11-210ENST00000547654 SPINK1P00995 79 aa0.9□□□□□ -2.27
SCAF11-210ENST00000547654 SPRR1BP22528 89 aa0.9□□□□□ -2.27
SCAF11-210ENST00000547654 TMEM167AQ8TBQ9 72 aa0.9□□□□□ -2.27
SCAF11-210ENST00000547654 A0A096LNI7 61 aa0.89□□□□□ -2.27
SCAF11-210ENST00000547654 K7EIM0 57 aa0.89□□□□□ -2.27
SCAF11-210ENST00000547654 LINC01590Q5TEZ4 76 aa0.89□□□□□ -2.27
SCAF11-210ENST00000547654 MT1BP07438 61 aa0.88□□□□□ -2.27
SCAF11-210ENST00000547654 SPRR1AP35321 89 aa0.88□□□□□ -2.27
SCAF11-210ENST00000547654 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
SCAF11-210ENST00000547654 HTN1P15515 57 aa0.87□□□□□ -2.27
SCAF11-210ENST00000547654 MRPL34Q9BQ48 92 aaKnown RBP0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms