RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 CASC2Q6XLA1 102 aa4.04□□□□□ -1.76
LINC00958-207ENST00000534477 WFDC13Q8IUB5 93 aa4.04□□□□□ -1.76
LINC00958-207ENST00000534477 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
LINC00958-207ENST00000534477 MP68P56378 58 aa4.03□□□□□ -1.76
LINC00958-207ENST00000534477 DEFB116Q30KQ4 102 aa4.03□□□□□ -1.76
LINC00958-207ENST00000534477 ATP5EP56381 51 aaPredicted RBP4.02□□□□□ -1.77
LINC00958-207ENST00000534477 LINC00313P59037 77 aa4.02□□□□□ -1.77
LINC00958-207ENST00000534477 PRR15Q8IV56 129 aa4.02□□□□□ -1.77
LINC00958-207ENST00000534477 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
LINC00958-207ENST00000534477 MT2AP02795 61 aa4.01□□□□□ -1.77
LINC00958-207ENST00000534477 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
LINC00958-207ENST00000534477 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
LINC00958-207ENST00000534477 IGHV6-1A0A0B4J1U7 121 aa4□□□□□ -1.77
LINC00958-207ENST00000534477 A0A1B0GVX0 72 aa4□□□□□ -1.77
LINC00958-207ENST00000534477 KRTAP16-1A8MUX0 517 aa4□□□□□ -1.77
LINC00958-207ENST00000534477 KRTAP10-10P60014 251 aa4□□□□□ -1.77
LINC00958-207ENST00000534477 KLKP1Q107X0 134 aa4□□□□□ -1.77
LINC00958-207ENST00000534477 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
LINC00958-207ENST00000534477 NDUFS5O43920 106 aa3.99□□□□□ -1.77
LINC00958-207ENST00000534477 MT1FP04733 61 aa3.99□□□□□ -1.77
LINC00958-207ENST00000534477 C8orf87E5RJ46 101 aa3.98□□□□□ -1.77
LINC00958-207ENST00000534477 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
LINC00958-207ENST00000534477 TP53AIP1Q9HCN2 124 aa3.98□□□□□ -1.77
LINC00958-207ENST00000534477 SNURFQ9Y675 71 aa3.98□□□□□ -1.77
LINC00958-207ENST00000534477 H3BPC8 53 aa3.97□□□□□ -1.77
LINC00958-207ENST00000534477 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
LINC00958-207ENST00000534477 USH2AO75445 5202 aa3.96□□□□□ -1.78
LINC00958-207ENST00000534477 MMP24-AS1A0A0U1RRL7 71 aa3.96□□□□□ -1.78
LINC00958-207ENST00000534477 H0Y9P7 68 aa3.96□□□□□ -1.78
LINC00958-207ENST00000534477 HRES1P13985 223 aa3.96□□□□□ -1.78
LINC00958-207ENST00000534477 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
LINC00958-207ENST00000534477 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
LINC00958-207ENST00000534477 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
LINC00958-207ENST00000534477 H7BZZ5 65 aa3.92□□□□□ -1.78
LINC00958-207ENST00000534477 LINC00208Q96KT6 92 aa3.91□□□□□ -1.78
LINC00958-207ENST00000534477 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
LINC00958-207ENST00000534477 SPINK7P58062 85 aa3.9□□□□□ -1.79
LINC00958-207ENST00000534477 C1orf64Q8NEQ6 169 aa3.9□□□□□ -1.79
LINC00958-207ENST00000534477 ZCCHC13Q8WW36 166 aaKnown RBP3.9□□□□□ -1.79
LINC00958-207ENST00000534477 SERP1Q9Y6X1 66 aa3.9□□□□□ -1.79
LINC00958-207ENST00000534477 CYSTM1Q9H1C7 97 aa3.89□□□□□ -1.79
LINC00958-207ENST00000534477 LOC101927531A0A1B0GV80 90 aa3.88□□□□□ -1.79
LINC00958-207ENST00000534477 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
LINC00958-207ENST00000534477 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
LINC00958-207ENST00000534477 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
LINC00958-207ENST00000534477 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
LINC00958-207ENST00000534477 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
LINC00958-207ENST00000534477 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
LINC00958-207ENST00000534477 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
LINC00958-207ENST00000534477 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
LINC00958-207ENST00000534477 CYP4F30PQ9H0H9 118 aa3.8□□□□□ -1.8
LINC00958-207ENST00000534477 Q5W150 140 aa3.78□□□□□ -1.8
LINC00958-207ENST00000534477 C7orf65Q6ZTY9 151 aa3.78□□□□□ -1.8
LINC00958-207ENST00000534477 CHKB-CPT1BH3BT56 60 aa3.77□□□□□ -1.81
LINC00958-207ENST00000534477 V9GYY9 64 aa3.77□□□□□ -1.81
LINC00958-207ENST00000534477 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
LINC00958-207ENST00000534477 ACYP2P14621 99 aa3.73□□□□□ -1.81
LINC00958-207ENST00000534477 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
LINC00958-207ENST00000534477 COA5Q86WW8 74 aa3.73□□□□□ -1.81
LINC00958-207ENST00000534477 A8MUN3 132 aa3.7□□□□□ -1.82
LINC00958-207ENST00000534477 DMAC1Q96GE9 116 aa3.7□□□□□ -1.82
LINC00958-207ENST00000534477 C4orf26Q17RF5 130 aa3.69□□□□□ -1.82
LINC00958-207ENST00000534477 SPTSSBQ8NFR3 76 aa3.69□□□□□ -1.82
LINC00958-207ENST00000534477 A6NN06 94 aa3.67□□□□□ -1.82
LINC00958-207ENST00000534477 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
LINC00958-207ENST00000534477 PRR15LQ9BU68 103 aa3.67□□□□□ -1.82
LINC00958-207ENST00000534477 Q1T7F1 81 aa3.66□□□□□ -1.82
LINC00958-207ENST00000534477 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
LINC00958-207ENST00000534477 NEBP20929 6669 aa3.64□□□□□ -1.83
LINC00958-207ENST00000534477 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
LINC00958-207ENST00000534477 Q5VV11 94 aa3.63□□□□□ -1.83
LINC00958-207ENST00000534477 S4R3F8 94 aa3.63□□□□□ -1.83
LINC00958-207ENST00000534477 PSPHP1O15172 72 aa3.62□□□□□ -1.83
LINC00958-207ENST00000534477 SEC61GP60059 68 aa3.62□□□□□ -1.83
LINC00958-207ENST00000534477 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
LINC00958-207ENST00000534477 MT1BP07438 61 aa3.6□□□□□ -1.83
LINC00958-207ENST00000534477 A0A1B0GU69 56 aa3.59□□□□□ -1.83
LINC00958-207ENST00000534477 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
LINC00958-207ENST00000534477 A6NED7 52 aa3.58□□□□□ -1.84
LINC00958-207ENST00000534477 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
LINC00958-207ENST00000534477 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
LINC00958-207ENST00000534477 LCA10Q71F78 164 aa3.58□□□□□ -1.84
LINC00958-207ENST00000534477 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
LINC00958-207ENST00000534477 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
LINC00958-207ENST00000534477 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
LINC00958-207ENST00000534477 KRTAP19-8Q3LI54 63 aa3.54□□□□□ -1.84
LINC00958-207ENST00000534477 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
LINC00958-207ENST00000534477 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
LINC00958-207ENST00000534477 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.85
LINC00958-207ENST00000534477 A8MU10 97 aa3.5□□□□□ -1.85
LINC00958-207ENST00000534477 UQCR11O14957 56 aa3.49□□□□□ -1.85
LINC00958-207ENST00000534477 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
LINC00958-207ENST00000534477 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
LINC00958-207ENST00000534477 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
LINC00958-207ENST00000534477 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
LINC00958-207ENST00000534477 CRIPTQ9P021 101 aa3.44□□□□□ -1.86
LINC00958-207ENST00000534477 SPRR2EP22531 72 aa3.43□□□□□ -1.86
LINC00958-207ENST00000534477 SPRR2BP35325 72 aa3.43□□□□□ -1.86
LINC00958-207ENST00000534477 SPRR2AP35326 72 aa3.43□□□□□ -1.86
LINC00958-207ENST00000534477 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms