RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 PPP1R17O96001 155 aa0.23□□□□□ -2.37
PCM1-220ENST00000523896 POLR2KP53803 58 aaKnown RBP0.23□□□□□ -2.37
PCM1-220ENST00000523896 SEC11AP67812 179 aa0.23□□□□□ -2.37
PCM1-220ENST00000523896 Q6JHZ5 121 aa0.23□□□□□ -2.37
PCM1-220ENST00000523896 SPINK8P0C7L1 97 aa0.22□□□□□ -2.37
PCM1-220ENST00000523896 Q5BKY6 102 aa0.22□□□□□ -2.37
PCM1-220ENST00000523896 BRK1Q8WUW1 75 aa0.22□□□□□ -2.37
PCM1-220ENST00000523896 DMAC1Q96GE9 116 aa0.22□□□□□ -2.37
PCM1-220ENST00000523896 IGLV5-48A0A075B6I7 105 aa0.21□□□□□ -2.38
PCM1-220ENST00000523896 SMIM31A0A1B0GVY4 71 aa0.21□□□□□ -2.38
PCM1-220ENST00000523896 UQCRQO14949 82 aa0.21□□□□□ -2.38
PCM1-220ENST00000523896 GCHFRP30047 84 aa0.21□□□□□ -2.38
PCM1-220ENST00000523896 WHAMMP3Q1A5X7 153 aa0.21□□□□□ -2.38
PCM1-220ENST00000523896 C20orf197Q8N268 126 aa0.21□□□□□ -2.38
PCM1-220ENST00000523896 TRAV13-2A0A0B4J235 113 aa0.2□□□□□ -2.38
PCM1-220ENST00000523896 K7EP34 96 aa0.2□□□□□ -2.38
PCM1-220ENST00000523896 IGKCP01834 107 aa0.2□□□□□ -2.38
PCM1-220ENST00000523896 COX7BP24311 80 aa0.2□□□□□ -2.38
PCM1-220ENST00000523896 CKS2P33552 79 aa0.2□□□□□ -2.38
PCM1-220ENST00000523896 LINC00472Q9H8W2 130 aa0.2□□□□□ -2.38
PCM1-220ENST00000523896 TMEM167BQ9NRX6 74 aa0.2□□□□□ -2.38
PCM1-220ENST00000523896 IL7P13232 177 aa0.19□□□□□ -2.38
PCM1-220ENST00000523896 MEIG1Q5JSS6 88 aa0.19□□□□□ -2.38
PCM1-220ENST00000523896 SFTA2Q6UW10 78 aa0.19□□□□□ -2.38
PCM1-220ENST00000523896 BAGE2Q86Y30 109 aa0.19□□□□□ -2.38
PCM1-220ENST00000523896 BORCS7-ASMTA0A0B4J1R7 106 aa0.18□□□□□ -2.38
PCM1-220ENST00000523896 TCRBV3S1A0A5B6 114 aa0.18□□□□□ -2.38
PCM1-220ENST00000523896 HCG22E2RYF7 251 aa0.18□□□□□ -2.38
PCM1-220ENST00000523896 NDUFC1O43677 76 aa0.18□□□□□ -2.38
PCM1-220ENST00000523896 SFT2D2O95562 160 aa0.18□□□□□ -2.38
PCM1-220ENST00000523896 SMIM13P0DJ93 91 aa0.18□□□□□ -2.38
PCM1-220ENST00000523896 RPS28P62857 69 aaKnown RBP0.18□□□□□ -2.38
PCM1-220ENST00000523896 C9orf62Q8N4C0 152 aa0.18□□□□□ -2.38
PCM1-220ENST00000523896 H3BUT2 72 aa0.17□□□□□ -2.38
PCM1-220ENST00000523896 AKAIN1P0CW23 69 aa0.17□□□□□ -2.38
PCM1-220ENST00000523896 ADCYAP1P18509 176 aa0.17□□□□□ -2.38
PCM1-220ENST00000523896 ELOF1P60002 83 aaKnown RBP0.17□□□□□ -2.38
PCM1-220ENST00000523896 RPL7L1Q6DKI1 246 aaKnown RBP0.17□□□□□ -2.38
PCM1-220ENST00000523896 MUSTN1Q8IVN3 82 aa0.17□□□□□ -2.38
PCM1-220ENST00000523896 FAM25AB3EWG3 89 aa0.16□□□□□ -2.38
PCM1-220ENST00000523896 FAM25CB3EWG5 89 aa0.16□□□□□ -2.38
PCM1-220ENST00000523896 FAM25GB3EWG6 89 aa0.16□□□□□ -2.38
PCM1-220ENST00000523896 C20orf78Q9BR46 151 aa0.16□□□□□ -2.38
PCM1-220ENST00000523896 CNFNQ9BYD5 112 aa0.16□□□□□ -2.38
PCM1-220ENST00000523896 LINC00587B1AMM8 73 aa0.15□□□□□ -2.39
PCM1-220ENST00000523896 CCKP06307 115 aa0.15□□□□□ -2.39
PCM1-220ENST00000523896 TCEAL7Q9BRU2 100 aa0.15□□□□□ -2.39
PCM1-220ENST00000523896 SNHG12Q9BXW3 62 aa0.15□□□□□ -2.39
PCM1-220ENST00000523896 TSTD3H0UI37 97 aa0.14□□□□□ -2.39
PCM1-220ENST00000523896 NDUFB1O75438 58 aa0.14□□□□□ -2.39
PCM1-220ENST00000523896 C8orf59Q8N0T1 100 aaPredicted RBP0.14□□□□□ -2.39
PCM1-220ENST00000523896 SMIM3Q9BZL3 60 aa0.14□□□□□ -2.39
PCM1-220ENST00000523896 A0A1B0GUT8 65 aa0.13□□□□□ -2.39
PCM1-220ENST00000523896 IGIPA6NJ69 53 aa0.13□□□□□ -2.39
PCM1-220ENST00000523896 J3KT08 172 aa0.13□□□□□ -2.39
PCM1-220ENST00000523896 DPM2O94777 84 aa0.13□□□□□ -2.39
PCM1-220ENST00000523896 GNG4P50150 75 aa0.13□□□□□ -2.39
PCM1-220ENST00000523896 NPC2P61916 151 aa0.13□□□□□ -2.39
PCM1-220ENST00000523896 SSBP1Q04837 148 aaKnown RBP0.13□□□□□ -2.39
PCM1-220ENST00000523896 HSPB11Q9Y547 144 aa0.13□□□□□ -2.39
PCM1-220ENST00000523896 FAUP35544 74 aaKnown RBP0.12□□□□□ -2.39
PCM1-220ENST00000523896 TMEM170BQ5T4T1 132 aa0.12□□□□□ -2.39
PCM1-220ENST00000523896 MRPL54Q6P161 138 aaKnown RBP0.12□□□□□ -2.39
PCM1-220ENST00000523896 CTXND1A0A1B0GTU2 59 aa0.11□□□□□ -2.39
PCM1-220ENST00000523896 A0A1B0GX51 115 aa0.11□□□□□ -2.39
PCM1-220ENST00000523896 hADV29S1A0JD25 119 aa0.11□□□□□ -2.39
PCM1-220ENST00000523896 NAP1L6A6NFF2 107 aa0.11□□□□□ -2.39
PCM1-220ENST00000523896 PPDPFLQ8WWR9 84 aa0.11□□□□□ -2.39
PCM1-220ENST00000523896 MYMXA0A1B0GTQ4 84 aa0.1□□□□□ -2.39
PCM1-220ENST00000523896 TNP1P09430 55 aa0.1□□□□□ -2.39
PCM1-220ENST00000523896 S100PP25815 95 aa0.1□□□□□ -2.39
PCM1-220ENST00000523896 MRPS10P82664 201 aaKnown RBP0.1□□□□□ -2.39
PCM1-220ENST00000523896 SMIM4Q8WVI0 70 aa0.1□□□□□ -2.39
PCM1-220ENST00000523896 MRPL34Q9BQ48 92 aaKnown RBP0.1□□□□□ -2.39
PCM1-220ENST00000523896 VPS25Q9BRG1 176 aa0.1□□□□□ -2.39
PCM1-220ENST00000523896 SPANXDQ9BXN6 97 aa0.1□□□□□ -2.39
PCM1-220ENST00000523896 NDUFB6O95139 128 aa0.09□□□□□ -2.4
PCM1-220ENST00000523896 MT-ND4LP03901 98 aa0.09□□□□□ -2.4
PCM1-220ENST00000523896 IGLC3P0DOY3 106 aa0.09□□□□□ -2.4
PCM1-220ENST00000523896 SERF2P84101 59 aa0.09□□□□□ -2.4
PCM1-220ENST00000523896 C12orf57Q99622 126 aa0.09□□□□□ -2.4
PCM1-220ENST00000523896 TRBV7-4A0A0J9YYF1 115 aa0.08□□□□□ -2.4
PCM1-220ENST00000523896 KCNRGQ8N5I3 272 aa0.08□□□□□ -2.4
PCM1-220ENST00000523896 Q8N8P6 123 aa0.08□□□□□ -2.4
PCM1-220ENST00000523896 PPP1R1CQ8WVI7 109 aa0.08□□□□□ -2.4
PCM1-220ENST00000523896 SPANXCQ9NY87 97 aa0.08□□□□□ -2.4
PCM1-220ENST00000523896 K7EMI3 77 aa0.07□□□□□ -2.4
PCM1-220ENST00000523896 S100A8P05109 93 aa0.07□□□□□ -2.4
PCM1-220ENST00000523896 TOMM5Q8N4H5 51 aa0.07□□□□□ -2.4
PCM1-220ENST00000523896 C9JAW5 83 aa0.06□□□□□ -2.4
PCM1-220ENST00000523896 ACYP1P07311 99 aa0.06□□□□□ -2.4
PCM1-220ENST00000523896 TCTE3Q8IZS6 198 aa0.06□□□□□ -2.4
PCM1-220ENST00000523896 LINC01549A6NIU2 74 aa0.05□□□□□ -2.4
PCM1-220ENST00000523896 GNG13Q9P2W3 67 aa0.05□□□□□ -2.4
PCM1-220ENST00000523896 MMP24-AS1A0A0U1RRL7 71 aa0.04□□□□□ -2.4
PCM1-220ENST00000523896 IFITM1P13164 125 aa0.04□□□□□ -2.4
PCM1-220ENST00000523896 BAGE3Q86Y29 109 aa0.04□□□□□ -2.4
PCM1-220ENST00000523896 SMIM11BQ8TCY0 68 aa0.04□□□□□ -2.4
PCM1-220ENST00000523896 LINC00308Q8TCZ7 52 aa0.04□□□□□ -2.4
PCM1-220ENST00000523896 SNCGO76070 127 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms