RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 C5orf47Q569G3 176 aa4□□□□□ -1.77
CTNNA1-227ENST00000521387 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
CTNNA1-227ENST00000521387 C8orf17Q9NRJ1 99 aa4□□□□□ -1.77
CTNNA1-227ENST00000521387 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
CTNNA1-227ENST00000521387 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
CTNNA1-227ENST00000521387 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
CTNNA1-227ENST00000521387 FAM229BQ4G0N7 80 aa3.98□□□□□ -1.77
CTNNA1-227ENST00000521387 IGHV6-1A0A0B4J1U7 121 aa3.97□□□□□ -1.77
CTNNA1-227ENST00000521387 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
CTNNA1-227ENST00000521387 H0Y9P7 68 aa3.96□□□□□ -1.78
CTNNA1-227ENST00000521387 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
CTNNA1-227ENST00000521387 ATP5EP56381 51 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-227ENST00000521387 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.78
CTNNA1-227ENST00000521387 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
CTNNA1-227ENST00000521387 MP68P56378 58 aa3.95□□□□□ -1.78
CTNNA1-227ENST00000521387 LINC00208Q96KT6 92 aa3.95□□□□□ -1.78
CTNNA1-227ENST00000521387 H3BPC8 53 aa3.94□□□□□ -1.78
CTNNA1-227ENST00000521387 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
CTNNA1-227ENST00000521387 TRAV22A0A0B4J277 110 aa3.93□□□□□ -1.78
CTNNA1-227ENST00000521387 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
CTNNA1-227ENST00000521387 Q5XG85 94 aa3.93□□□□□ -1.78
CTNNA1-227ENST00000521387 FP248Q71RG6 208 aaPredicted RBP3.93□□□□□ -1.78
CTNNA1-227ENST00000521387 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
CTNNA1-227ENST00000521387 C8orf87E5RJ46 101 aa3.91□□□□□ -1.78
CTNNA1-227ENST00000521387 NDUFS5O43920 106 aa3.91□□□□□ -1.78
CTNNA1-227ENST00000521387 C1orf64Q8NEQ6 169 aa3.91□□□□□ -1.78
CTNNA1-227ENST00000521387 PCOTHQ58A44 107 aa3.9□□□□□ -1.79
CTNNA1-227ENST00000521387 CYP4F30PQ9H0H9 118 aa3.9□□□□□ -1.79
CTNNA1-227ENST00000521387 MT2AP02795 61 aa3.89□□□□□ -1.79
CTNNA1-227ENST00000521387 LINC00313P59037 77 aa3.89□□□□□ -1.79
CTNNA1-227ENST00000521387 Q5W150 140 aa3.89□□□□□ -1.79
CTNNA1-227ENST00000521387 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
CTNNA1-227ENST00000521387 LIMD2Q9BT23 127 aa3.88□□□□□ -1.79
CTNNA1-227ENST00000521387 KRTAP16-1A8MUX0 517 aa3.87□□□□□ -1.79
CTNNA1-227ENST00000521387 MT1FP04733 61 aa3.87□□□□□ -1.79
CTNNA1-227ENST00000521387 C4orf26Q17RF5 130 aa3.87□□□□□ -1.79
CTNNA1-227ENST00000521387 SPINK1P00995 79 aa3.86□□□□□ -1.79
CTNNA1-227ENST00000521387 COX6B2Q6YFQ2 88 aa3.86□□□□□ -1.79
CTNNA1-227ENST00000521387 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
CTNNA1-227ENST00000521387 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
CTNNA1-227ENST00000521387 SPAG11AQ6PDA7 123 aa3.83□□□□□ -1.8
CTNNA1-227ENST00000521387 LOC101927531A0A1B0GV80 90 aa3.82□□□□□ -1.8
CTNNA1-227ENST00000521387 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-227ENST00000521387 MPLKIPQ8TAP9 179 aa3.81□□□□□ -1.8
CTNNA1-227ENST00000521387 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
CTNNA1-227ENST00000521387 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
CTNNA1-227ENST00000521387 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
CTNNA1-227ENST00000521387 IGKV2-30P06310 120 aa3.79□□□□□ -1.8
CTNNA1-227ENST00000521387 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
CTNNA1-227ENST00000521387 COA5Q86WW8 74 aa3.78□□□□□ -1.8
CTNNA1-227ENST00000521387 HRES1P13985 223 aa3.77□□□□□ -1.81
CTNNA1-227ENST00000521387 Q1T7F1 81 aa3.77□□□□□ -1.81
CTNNA1-227ENST00000521387 C9orf92A6NGG3 77 aa3.75□□□□□ -1.81
CTNNA1-227ENST00000521387 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
CTNNA1-227ENST00000521387 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
CTNNA1-227ENST00000521387 A8MUU9 505 aa3.73□□□□□ -1.81
CTNNA1-227ENST00000521387 C20orf166-AS1Q96NR2 134 aa3.72□□□□□ -1.81
CTNNA1-227ENST00000521387 A8MUN3 132 aa3.71□□□□□ -1.82
CTNNA1-227ENST00000521387 PSPHP1O15172 72 aa3.71□□□□□ -1.82
CTNNA1-227ENST00000521387 ACYP2P14621 99 aa3.71□□□□□ -1.82
CTNNA1-227ENST00000521387 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
CTNNA1-227ENST00000521387 V9GYY9 64 aa3.71□□□□□ -1.82
CTNNA1-227ENST00000521387 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
CTNNA1-227ENST00000521387 Q5VV11 94 aa3.69□□□□□ -1.82
CTNNA1-227ENST00000521387 LINC01558Q9Y6Z2 57 aa3.69□□□□□ -1.82
CTNNA1-227ENST00000521387 C7orf65Q6ZTY9 151 aa3.68□□□□□ -1.82
CTNNA1-227ENST00000521387 PRR15LQ9BU68 103 aa3.67□□□□□ -1.82
CTNNA1-227ENST00000521387 Q75L30 129 aa3.66□□□□□ -1.82
CTNNA1-227ENST00000521387 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
CTNNA1-227ENST00000521387 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
CTNNA1-227ENST00000521387 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
CTNNA1-227ENST00000521387 SPINK7P58062 85 aa3.63□□□□□ -1.83
CTNNA1-227ENST00000521387 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
CTNNA1-227ENST00000521387 A8MU10 97 aa3.61□□□□□ -1.83
CTNNA1-227ENST00000521387 RPL37P61927 97 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-227ENST00000521387 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
CTNNA1-227ENST00000521387 SPRR2EP22531 72 aa3.59□□□□□ -1.83
CTNNA1-227ENST00000521387 SPRR2BP35325 72 aa3.59□□□□□ -1.83
CTNNA1-227ENST00000521387 SPRR2AP35326 72 aa3.59□□□□□ -1.83
CTNNA1-227ENST00000521387 ATP11AUNQ6ZP68 121 aa3.58□□□□□ -1.84
CTNNA1-227ENST00000521387 LCA10Q71F78 164 aa3.58□□□□□ -1.84
CTNNA1-227ENST00000521387 A6NED7 52 aa3.57□□□□□ -1.84
CTNNA1-227ENST00000521387 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
CTNNA1-227ENST00000521387 A0A1B0GU69 56 aa3.55□□□□□ -1.84
CTNNA1-227ENST00000521387 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
CTNNA1-227ENST00000521387 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
CTNNA1-227ENST00000521387 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
CTNNA1-227ENST00000521387 A6NN06 94 aa3.5□□□□□ -1.85
CTNNA1-227ENST00000521387 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
CTNNA1-227ENST00000521387 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
CTNNA1-227ENST00000521387 SPATA8Q6RVD6 105 aa3.49□□□□□ -1.85
CTNNA1-227ENST00000521387 SPRR2DP22532 72 aa3.47□□□□□ -1.85
CTNNA1-227ENST00000521387 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
CTNNA1-227ENST00000521387 UQCR11O14957 56 aa3.46□□□□□ -1.86
CTNNA1-227ENST00000521387 SEC61GP60059 68 aa3.46□□□□□ -1.86
CTNNA1-227ENST00000521387 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
CTNNA1-227ENST00000521387 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
CTNNA1-227ENST00000521387 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
CTNNA1-227ENST00000521387 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
CTNNA1-227ENST00000521387 S4R3F8 94 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms