RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 SPACA4Q8TDM5 124 aa2.98□□□□□ -1.93
PVT1-205ENST00000517790 IGKV2-28A0A075B6P5 120 aa2.97□□□□□ -1.93
PVT1-205ENST00000517790 IGKV2D-28P01615 120 aa2.97□□□□□ -1.93
PVT1-205ENST00000517790 SPINK6Q6UWN8 80 aa2.97□□□□□ -1.93
PVT1-205ENST00000517790 Q8IZM0 81 aa2.97□□□□□ -1.93
PVT1-205ENST00000517790 Q8N9L7 120 aa2.97□□□□□ -1.93
PVT1-205ENST00000517790 TP53AIP1Q9HCN2 124 aa2.96□□□□□ -1.94
PVT1-205ENST00000517790 PRO2289Q9P1D8 64 aa2.96□□□□□ -1.94
PVT1-205ENST00000517790 IGKV2-24A0A0C4DH68 120 aa2.94□□□□□ -1.94
PVT1-205ENST00000517790 ACYP2P14621 99 aa2.94□□□□□ -1.94
PVT1-205ENST00000517790 CDKN2A-AS1Q9UH64 79 aa2.94□□□□□ -1.94
PVT1-205ENST00000517790 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
PVT1-205ENST00000517790 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
PVT1-205ENST00000517790 COX6A2Q02221 97 aa2.93□□□□□ -1.94
PVT1-205ENST00000517790 CLPSL2Q6UWE3 100 aa2.93□□□□□ -1.94
PVT1-205ENST00000517790 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
PVT1-205ENST00000517790 ANGP03950 147 aaKnown RBP2.92□□□□□ -1.94
PVT1-205ENST00000517790 ANAPC11Q9NYG5 84 aa2.92□□□□□ -1.94
PVT1-205ENST00000517790 M0QY20 66 aa2.91□□□□□ -1.94
PVT1-205ENST00000517790 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
PVT1-205ENST00000517790 A0A096LNI7 61 aa2.9□□□□□ -1.95
PVT1-205ENST00000517790 A0A1W2PNN7 141 aa2.9□□□□□ -1.95
PVT1-205ENST00000517790 HRES1P13985 223 aa2.9□□□□□ -1.95
PVT1-205ENST00000517790 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
PVT1-205ENST00000517790 A0A0G2JQZ4 141 aa2.87□□□□□ -1.95
PVT1-205ENST00000517790 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
PVT1-205ENST00000517790 DSCR10P59022 87 aa2.87□□□□□ -1.95
PVT1-205ENST00000517790 Q96NJ1 140 aa2.87□□□□□ -1.95
PVT1-205ENST00000517790 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
PVT1-205ENST00000517790 IGLV5-48A0A075B6I7 105 aa2.86□□□□□ -1.95
PVT1-205ENST00000517790 SSBP3-AS1Q7Z2R9 100 aa2.85□□□□□ -1.95
PVT1-205ENST00000517790 K7EQZ3 153 aa2.84□□□□□ -1.95
PVT1-205ENST00000517790 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
PVT1-205ENST00000517790 MUC17Q685J3 4493 aa2.84□□□□□ -1.96
PVT1-205ENST00000517790 C6orf48Q9UBA6 75 aa2.83□□□□□ -1.96
PVT1-205ENST00000517790 IGLV6-57P01721 117 aa2.82□□□□□ -1.96
PVT1-205ENST00000517790 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
PVT1-205ENST00000517790 LINC00304Q8N9R0 145 aa2.82□□□□□ -1.96
PVT1-205ENST00000517790 TOMM7Q9P0U1 55 aa2.82□□□□□ -1.96
PVT1-205ENST00000517790 GVQW2A0A096LPI5 108 aaPredicted RBP2.81□□□□□ -1.96
PVT1-205ENST00000517790 MT1HP80294 61 aa2.81□□□□□ -1.96
PVT1-205ENST00000517790 WFDC13Q8IUB5 93 aa2.81□□□□□ -1.96
PVT1-205ENST00000517790 XP32Q5T750 250 aa2.8□□□□□ -1.96
PVT1-205ENST00000517790 KRTAP10-6P60371 365 aaPredicted RBP2.79□□□□□ -1.96
PVT1-205ENST00000517790 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
PVT1-205ENST00000517790 PCOTHQ58A44 107 aa2.79□□□□□ -1.96
PVT1-205ENST00000517790 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
PVT1-205ENST00000517790 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
PVT1-205ENST00000517790 INE1O15225 51 aa2.76□□□□□ -1.97
PVT1-205ENST00000517790 MT3P25713 68 aa2.76□□□□□ -1.97
PVT1-205ENST00000517790 LCE4AQ5TA78 99 aa2.76□□□□□ -1.97
PVT1-205ENST00000517790 Q6ZRX8 168 aa2.75□□□□□ -1.97
PVT1-205ENST00000517790 PLAC4Q8WY50 150 aa2.75□□□□□ -1.97
PVT1-205ENST00000517790 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
PVT1-205ENST00000517790 MRPL34Q9BQ48 92 aaKnown RBP2.74□□□□□ -1.97
PVT1-205ENST00000517790 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
PVT1-205ENST00000517790 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
PVT1-205ENST00000517790 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
PVT1-205ENST00000517790 M0R2T5 61 aa2.71□□□□□ -1.98
PVT1-205ENST00000517790 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
PVT1-205ENST00000517790 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
PVT1-205ENST00000517790 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.98
PVT1-205ENST00000517790 USH2AO75445 5202 aa2.68□□□□□ -1.98
PVT1-205ENST00000517790 MMP24-AS1A0A0U1RRL7 71 aa2.67□□□□□ -1.98
PVT1-205ENST00000517790 UNQ6190/PRO20217Q6UXQ8 127 aa2.67□□□□□ -1.98
PVT1-205ENST00000517790 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.99
PVT1-205ENST00000517790 KRTAP4-8Q9BYQ9 185 aa2.64□□□□□ -1.99
PVT1-205ENST00000517790 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
PVT1-205ENST00000517790 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
PVT1-205ENST00000517790 DEFB105AQ8NG35 78 aa2.63□□□□□ -1.99
PVT1-205ENST00000517790 SYNE2Q8WXH0 6885 aaKnown RBP2.63□□□□□ -1.99
PVT1-205ENST00000517790 FLGP20930 4061 aaPredicted RBP2.63□□□□□ -1.99
PVT1-205ENST00000517790 H0YAA0 97 aa2.62□□□□□ -1.99
PVT1-205ENST00000517790 RPL37P61927 97 aaKnown RBP2.61□□□□□ -1.99
PVT1-205ENST00000517790 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
PVT1-205ENST00000517790 H1FX-AS1Q4G0G2 97 aa2.61□□□□□ -1.99
PVT1-205ENST00000517790 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
PVT1-205ENST00000517790 KRTAP9-8Q9BYQ0 159 aa2.61□□□□□ -1.99
PVT1-205ENST00000517790 PRLHP81277 87 aa2.6□□□□□ -1.99
PVT1-205ENST00000517790 IGFL1Q6UW32 110 aa2.59□□□□□ -1.99
PVT1-205ENST00000517790 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
PVT1-205ENST00000517790 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
PVT1-205ENST00000517790 LCE1FQ5T754 118 aa2.58□□□□□ -2
PVT1-205ENST00000517790 C9orf92A6NGG3 77 aa2.56□□□□□ -2
PVT1-205ENST00000517790 SPINK1P00995 79 aa2.56□□□□□ -2
PVT1-205ENST00000517790 MT2AP02795 61 aa2.55□□□□□ -2
PVT1-205ENST00000517790 SPRR1AP35321 89 aa2.55□□□□□ -2
PVT1-205ENST00000517790 KRTAP12-2P59991 146 aa2.55□□□□□ -2
PVT1-205ENST00000517790 NEBP20929 6669 aa2.53□□□□□ -2
PVT1-205ENST00000517790 MT1FP04733 61 aa2.53□□□□□ -2
PVT1-205ENST00000517790 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
PVT1-205ENST00000517790 SPRR1BP22528 89 aa2.51□□□□□ -2.01
PVT1-205ENST00000517790 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
PVT1-205ENST00000517790 RPS29P62273 56 aaKnown RBP2.5□□□□□ -2.01
PVT1-205ENST00000517790 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
PVT1-205ENST00000517790 KRTAP4-8A0A0G2JLE6 195 aa2.46□□□□□ -2.02
PVT1-205ENST00000517790 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
PVT1-205ENST00000517790 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
PVT1-205ENST00000517790 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
PVT1-205ENST00000517790 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms