RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MRPL34Q9BQ48 92 aaKnown RBP4.47□□□□□ -1.69
NEDD9-211ENST00000508546 CCDC179H3BU77 68 aa4.46□□□□□ -1.7
NEDD9-211ENST00000508546 NDUFS5O43920 106 aa4.44□□□□□ -1.7
NEDD9-211ENST00000508546 TP53AIP1Q9HCN2 124 aa4.43□□□□□ -1.7
NEDD9-211ENST00000508546 SPINK7P58062 85 aa4.42□□□□□ -1.7
NEDD9-211ENST00000508546 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
NEDD9-211ENST00000508546 TRAV22A0A0B4J277 110 aa4.41□□□□□ -1.7
NEDD9-211ENST00000508546 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
NEDD9-211ENST00000508546 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
NEDD9-211ENST00000508546 H0Y9P7 68 aa4.4□□□□□ -1.71
NEDD9-211ENST00000508546 MP68P56378 58 aa4.4□□□□□ -1.71
NEDD9-211ENST00000508546 KLKP1Q107X0 134 aa4.39□□□□□ -1.71
NEDD9-211ENST00000508546 SNURFQ9Y675 71 aa4.38□□□□□ -1.71
NEDD9-211ENST00000508546 H3BPC8 53 aa4.37□□□□□ -1.71
NEDD9-211ENST00000508546 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
NEDD9-211ENST00000508546 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
NEDD9-211ENST00000508546 CYSTM1Q9H1C7 97 aa4.37□□□□□ -1.71
NEDD9-211ENST00000508546 A6NN06 94 aa4.36□□□□□ -1.71
NEDD9-211ENST00000508546 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
NEDD9-211ENST00000508546 NDUFC1O43677 76 aa4.35□□□□□ -1.71
NEDD9-211ENST00000508546 Q5W150 140 aa4.34□□□□□ -1.71
NEDD9-211ENST00000508546 C1orf64Q8NEQ6 169 aa4.34□□□□□ -1.71
NEDD9-211ENST00000508546 H7BZZ5 65 aa4.33□□□□□ -1.72
NEDD9-211ENST00000508546 LOC101927531A0A1B0GV80 90 aa4.32□□□□□ -1.72
NEDD9-211ENST00000508546 TMEM258P61165 79 aa4.32□□□□□ -1.72
NEDD9-211ENST00000508546 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
NEDD9-211ENST00000508546 SPRR2EP22531 72 aa4.3□□□□□ -1.72
NEDD9-211ENST00000508546 SPRR2BP35325 72 aa4.3□□□□□ -1.72
NEDD9-211ENST00000508546 SPRR2AP35326 72 aa4.3□□□□□ -1.72
NEDD9-211ENST00000508546 MT1BP07438 61 aa4.29□□□□□ -1.72
NEDD9-211ENST00000508546 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
NEDD9-211ENST00000508546 ATP5EP56381 51 aaPredicted RBP4.27□□□□□ -1.73
NEDD9-211ENST00000508546 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
NEDD9-211ENST00000508546 CYP4F30PQ9H0H9 118 aa4.27□□□□□ -1.73
NEDD9-211ENST00000508546 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
NEDD9-211ENST00000508546 Q5VV11 94 aa4.26□□□□□ -1.73
NEDD9-211ENST00000508546 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
NEDD9-211ENST00000508546 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
NEDD9-211ENST00000508546 SPANXA2-OT1Q8N9U9 137 aa4.24□□□□□ -1.73
NEDD9-211ENST00000508546 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
NEDD9-211ENST00000508546 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
NEDD9-211ENST00000508546 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
NEDD9-211ENST00000508546 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
NEDD9-211ENST00000508546 SPRR2DP22532 72 aa4.16□□□□□ -1.74
NEDD9-211ENST00000508546 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
NEDD9-211ENST00000508546 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
NEDD9-211ENST00000508546 RPS28P62857 69 aaKnown RBP4.13□□□□□ -1.75
NEDD9-211ENST00000508546 A8MUN3 132 aa4.12□□□□□ -1.75
NEDD9-211ENST00000508546 ACYP2P14621 99 aa4.12□□□□□ -1.75
NEDD9-211ENST00000508546 COA5Q86WW8 74 aa4.12□□□□□ -1.75
NEDD9-211ENST00000508546 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
NEDD9-211ENST00000508546 CSAG1Q6PB30 78 aa4.09□□□□□ -1.75
NEDD9-211ENST00000508546 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
NEDD9-211ENST00000508546 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
NEDD9-211ENST00000508546 S4R3F8 94 aa4.06□□□□□ -1.76
NEDD9-211ENST00000508546 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
NEDD9-211ENST00000508546 LCA10Q71F78 164 aa4.03□□□□□ -1.76
NEDD9-211ENST00000508546 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
NEDD9-211ENST00000508546 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
NEDD9-211ENST00000508546 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
NEDD9-211ENST00000508546 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
NEDD9-211ENST00000508546 SPTSSBQ8NFR3 76 aa3.99□□□□□ -1.77
NEDD9-211ENST00000508546 V9GYY9 64 aa3.98□□□□□ -1.77
NEDD9-211ENST00000508546 Q1T7F1 81 aa3.97□□□□□ -1.77
NEDD9-211ENST00000508546 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
NEDD9-211ENST00000508546 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
NEDD9-211ENST00000508546 AHNAK2Q8IVF2 5795 aa3.94□□□□□ -1.78
NEDD9-211ENST00000508546 MT1XP80297 61 aa3.94□□□□□ -1.78
NEDD9-211ENST00000508546 LINC01558Q9Y6Z2 57 aa3.94□□□□□ -1.78
NEDD9-211ENST00000508546 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
NEDD9-211ENST00000508546 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
NEDD9-211ENST00000508546 PSPHP1O15172 72 aa3.91□□□□□ -1.78
NEDD9-211ENST00000508546 A0A1B0GU69 56 aa3.9□□□□□ -1.79
NEDD9-211ENST00000508546 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
NEDD9-211ENST00000508546 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
NEDD9-211ENST00000508546 SEC61GP60059 68 aa3.88□□□□□ -1.79
NEDD9-211ENST00000508546 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
NEDD9-211ENST00000508546 H0YAA0 97 aa3.86□□□□□ -1.79
NEDD9-211ENST00000508546 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
NEDD9-211ENST00000508546 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
NEDD9-211ENST00000508546 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
NEDD9-211ENST00000508546 A6NED7 52 aa3.8□□□□□ -1.8
NEDD9-211ENST00000508546 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
NEDD9-211ENST00000508546 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
NEDD9-211ENST00000508546 KRTAP3-2Q9BYR7 98 aa3.78□□□□□ -1.8
NEDD9-211ENST00000508546 A0A1B0GU33 70 aa3.77□□□□□ -1.81
NEDD9-211ENST00000508546 UQCR11O14957 56 aa3.77□□□□□ -1.81
NEDD9-211ENST00000508546 P0C880 135 aa3.76□□□□□ -1.81
NEDD9-211ENST00000508546 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
NEDD9-211ENST00000508546 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
NEDD9-211ENST00000508546 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
NEDD9-211ENST00000508546 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
NEDD9-211ENST00000508546 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
NEDD9-211ENST00000508546 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
NEDD9-211ENST00000508546 R4GN34 69 aa3.72□□□□□ -1.81
NEDD9-211ENST00000508546 MT4P47944 62 aa3.71□□□□□ -1.82
NEDD9-211ENST00000508546 SPATA8Q6RVD6 105 aa3.71□□□□□ -1.82
NEDD9-211ENST00000508546 A8MU10 97 aa3.69□□□□□ -1.82
NEDD9-211ENST00000508546 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
NEDD9-211ENST00000508546 M0QZ58 72 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms