RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 C5orf47Q569G3 176 aa4.81□□□□□ -1.64
NUDCD3-210ENST00000493613 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
NUDCD3-210ENST00000493613 TRAV22A0A0B4J277 110 aa4.8□□□□□ -1.64
NUDCD3-210ENST00000493613 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
NUDCD3-210ENST00000493613 KRTAP6-3Q3LI67 103 aa4.8□□□□□ -1.64
NUDCD3-210ENST00000493613 OCR1Q9BZK8 76 aa4.8□□□□□ -1.64
NUDCD3-210ENST00000493613 H0Y9P7 68 aa4.78□□□□□ -1.64
NUDCD3-210ENST00000493613 H3BPC8 53 aa4.77□□□□□ -1.65
NUDCD3-210ENST00000493613 COX7CP15954 63 aa4.77□□□□□ -1.65
NUDCD3-210ENST00000493613 Q5W150 140 aa4.77□□□□□ -1.65
NUDCD3-210ENST00000493613 SEC61GP60059 68 aa4.76□□□□□ -1.65
NUDCD3-210ENST00000493613 C7orf65Q6ZTY9 151 aa4.76□□□□□ -1.65
NUDCD3-210ENST00000493613 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
NUDCD3-210ENST00000493613 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
NUDCD3-210ENST00000493613 C4orf26Q17RF5 130 aa4.74□□□□□ -1.65
NUDCD3-210ENST00000493613 C1orf64Q8NEQ6 169 aa4.74□□□□□ -1.65
NUDCD3-210ENST00000493613 C20orf197Q8N268 126 aa4.73□□□□□ -1.65
NUDCD3-210ENST00000493613 NDUFC1O43677 76 aa4.69□□□□□ -1.66
NUDCD3-210ENST00000493613 SNURFQ9Y675 71 aa4.69□□□□□ -1.66
NUDCD3-210ENST00000493613 NEBP20929 6669 aa4.68□□□□□ -1.66
NUDCD3-210ENST00000493613 A6NN06 94 aa4.67□□□□□ -1.66
NUDCD3-210ENST00000493613 KLKP1Q107X0 134 aa4.67□□□□□ -1.66
NUDCD3-210ENST00000493613 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
NUDCD3-210ENST00000493613 CYP4F30PQ9H0H9 118 aa4.66□□□□□ -1.66
NUDCD3-210ENST00000493613 MT1BP07438 61 aa4.64□□□□□ -1.67
NUDCD3-210ENST00000493613 Q5VV11 94 aa4.64□□□□□ -1.67
NUDCD3-210ENST00000493613 KRTAP3-1Q9BYR8 98 aa4.64□□□□□ -1.67
NUDCD3-210ENST00000493613 S4R3F8 94 aa4.64□□□□□ -1.67
NUDCD3-210ENST00000493613 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
NUDCD3-210ENST00000493613 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
NUDCD3-210ENST00000493613 LCA10Q71F78 164 aa4.61□□□□□ -1.67
NUDCD3-210ENST00000493613 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
NUDCD3-210ENST00000493613 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
NUDCD3-210ENST00000493613 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
NUDCD3-210ENST00000493613 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
NUDCD3-210ENST00000493613 H7BZZ5 65 aa4.57□□□□□ -1.68
NUDCD3-210ENST00000493613 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
NUDCD3-210ENST00000493613 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
NUDCD3-210ENST00000493613 TMEM258P61165 79 aa4.57□□□□□ -1.68
NUDCD3-210ENST00000493613 V9GYY9 64 aa4.56□□□□□ -1.68
NUDCD3-210ENST00000493613 A8MUN3 132 aa4.55□□□□□ -1.68
NUDCD3-210ENST00000493613 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
NUDCD3-210ENST00000493613 CYSTM1Q9H1C7 97 aa4.53□□□□□ -1.68
NUDCD3-210ENST00000493613 ACYP2P14621 99 aa4.52□□□□□ -1.69
NUDCD3-210ENST00000493613 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
NUDCD3-210ENST00000493613 CHKB-CPT1BH3BT56 60 aa4.5□□□□□ -1.69
NUDCD3-210ENST00000493613 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
NUDCD3-210ENST00000493613 CRIPTQ9P021 101 aa4.48□□□□□ -1.69
NUDCD3-210ENST00000493613 KMT2DO14686 5537 aa4.48□□□□□ -1.69
NUDCD3-210ENST00000493613 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
NUDCD3-210ENST00000493613 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
NUDCD3-210ENST00000493613 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
NUDCD3-210ENST00000493613 H3BS24 57 aa4.43□□□□□ -1.7
NUDCD3-210ENST00000493613 COA5Q86WW8 74 aa4.43□□□□□ -1.7
NUDCD3-210ENST00000493613 SERP1Q9Y6X1 66 aa4.43□□□□□ -1.7
NUDCD3-210ENST00000493613 H0YAA0 97 aa4.38□□□□□ -1.71
NUDCD3-210ENST00000493613 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
NUDCD3-210ENST00000493613 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
NUDCD3-210ENST00000493613 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
NUDCD3-210ENST00000493613 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
NUDCD3-210ENST00000493613 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
NUDCD3-210ENST00000493613 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
NUDCD3-210ENST00000493613 SPRR2EP22531 72 aa4.34□□□□□ -1.71
NUDCD3-210ENST00000493613 SPRR2BP35325 72 aa4.34□□□□□ -1.71
NUDCD3-210ENST00000493613 SPRR2AP35326 72 aa4.34□□□□□ -1.71
NUDCD3-210ENST00000493613 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
NUDCD3-210ENST00000493613 MT1XP80297 61 aa4.31□□□□□ -1.72
NUDCD3-210ENST00000493613 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
NUDCD3-210ENST00000493613 KRTAP4-8A0A0G2JLE6 195 aa4.29□□□□□ -1.72
NUDCD3-210ENST00000493613 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
NUDCD3-210ENST00000493613 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
NUDCD3-210ENST00000493613 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
NUDCD3-210ENST00000493613 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
NUDCD3-210ENST00000493613 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
NUDCD3-210ENST00000493613 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
NUDCD3-210ENST00000493613 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
NUDCD3-210ENST00000493613 A0A1B0GU69 56 aa4.25□□□□□ -1.73
NUDCD3-210ENST00000493613 R4GN34 69 aa4.25□□□□□ -1.73
NUDCD3-210ENST00000493613 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
NUDCD3-210ENST00000493613 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
NUDCD3-210ENST00000493613 P0C880 135 aa4.23□□□□□ -1.73
NUDCD3-210ENST00000493613 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
NUDCD3-210ENST00000493613 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
NUDCD3-210ENST00000493613 M0QZ58 72 aa4.21□□□□□ -1.74
NUDCD3-210ENST00000493613 Q1T7F1 81 aa4.21□□□□□ -1.74
NUDCD3-210ENST00000493613 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
NUDCD3-210ENST00000493613 SPRR2DP22532 72 aa4.2□□□□□ -1.74
NUDCD3-210ENST00000493613 LINC01554Q52M75 96 aa4.19□□□□□ -1.74
NUDCD3-210ENST00000493613 PSPHP1O15172 72 aa4.16□□□□□ -1.74
NUDCD3-210ENST00000493613 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
NUDCD3-210ENST00000493613 A0A1B0GU33 70 aa4.13□□□□□ -1.75
NUDCD3-210ENST00000493613 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
NUDCD3-210ENST00000493613 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
NUDCD3-210ENST00000493613 UQCR11O14957 56 aa4.1□□□□□ -1.75
NUDCD3-210ENST00000493613 A6NED7 52 aa4.09□□□□□ -1.75
NUDCD3-210ENST00000493613 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
NUDCD3-210ENST00000493613 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
NUDCD3-210ENST00000493613 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
NUDCD3-210ENST00000493613 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
NUDCD3-210ENST00000493613 A0A0D9SG42 100 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms