RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 ORMDL1Q9P0S3 153 aa3.13□□□□□ -1.91
VARS-222ENST00000470953 SNURFQ9Y675 71 aa3.13□□□□□ -1.91
VARS-222ENST00000470953 H3BQ85 93 aa3.12□□□□□ -1.91
VARS-222ENST00000470953 PDE6GP18545 87 aa3.12□□□□□ -1.91
VARS-222ENST00000470953 Q5VV11 94 aa3.12□□□□□ -1.91
VARS-222ENST00000470953 LOC101927531A0A1B0GV80 90 aa3.11□□□□□ -1.91
VARS-222ENST00000470953 HCG22E2RYF7 251 aa3.11□□□□□ -1.91
VARS-222ENST00000470953 MT2AP02795 61 aa3.11□□□□□ -1.91
VARS-222ENST00000470953 NREPQ16612 68 aa3.11□□□□□ -1.91
VARS-222ENST00000470953 A0A087WSZ3 146 aa3.1□□□□□ -1.91
VARS-222ENST00000470953 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
VARS-222ENST00000470953 MT1FP04733 61 aa3.1□□□□□ -1.91
VARS-222ENST00000470953 C14orf132Q9NPU4 83 aa3.1□□□□□ -1.91
VARS-222ENST00000470953 LOC110117498A0A087WWA1 95 aa3.09□□□□□ -1.91
VARS-222ENST00000470953 NDUFB1O75438 58 aa3.09□□□□□ -1.91
VARS-222ENST00000470953 CHKB-CPT1BH3BT56 60 aa3.08□□□□□ -1.92
VARS-222ENST00000470953 RPL37P61927 97 aaKnown RBP3.08□□□□□ -1.92
VARS-222ENST00000470953 C1orf64Q8NEQ6 169 aa3.08□□□□□ -1.92
VARS-222ENST00000470953 CASC2Q6XLA1 102 aa3.07□□□□□ -1.92
VARS-222ENST00000470953 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
VARS-222ENST00000470953 Q96NJ1 140 aa3.07□□□□□ -1.92
VARS-222ENST00000470953 OCR1Q9BZK8 76 aa3.07□□□□□ -1.92
VARS-222ENST00000470953 BPY2O14599 106 aa3.06□□□□□ -1.92
VARS-222ENST00000470953 IGKV4-1P06312 121 aa3.06□□□□□ -1.92
VARS-222ENST00000470953 Q8N9P0 234 aaPredicted RBP3.05□□□□□ -1.92
VARS-222ENST00000470953 SPANXA2-OT1Q8N9U9 137 aa3.05□□□□□ -1.92
VARS-222ENST00000470953 ZCCHC13Q8WW36 166 aaKnown RBP3.05□□□□□ -1.92
VARS-222ENST00000470953 A0A1W2PNM2 257 aa3.04□□□□□ -1.92
VARS-222ENST00000470953 A6NED7 52 aa3.04□□□□□ -1.92
VARS-222ENST00000470953 DSCR10P59022 87 aa3.04□□□□□ -1.92
VARS-222ENST00000470953 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
VARS-222ENST00000470953 SPRR2EP22531 72 aa3.03□□□□□ -1.92
VARS-222ENST00000470953 SPRR2BP35325 72 aa3.03□□□□□ -1.92
VARS-222ENST00000470953 SPRR2AP35326 72 aa3.03□□□□□ -1.92
VARS-222ENST00000470953 DEFB116Q30KQ4 102 aa3.02□□□□□ -1.93
VARS-222ENST00000470953 Q6ZQT0 140 aa3.02□□□□□ -1.93
VARS-222ENST00000470953 H3BPC8 53 aa3.01□□□□□ -1.93
VARS-222ENST00000470953 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
VARS-222ENST00000470953 PRR15LQ9BU68 103 aa3.01□□□□□ -1.93
VARS-222ENST00000470953 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
VARS-222ENST00000470953 C20orf166-AS1Q96NR2 134 aa3□□□□□ -1.93
VARS-222ENST00000470953 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
VARS-222ENST00000470953 A8MU10 97 aa2.99□□□□□ -1.93
VARS-222ENST00000470953 A8MUU9 505 aa2.99□□□□□ -1.93
VARS-222ENST00000470953 LINC00208Q96KT6 92 aa2.99□□□□□ -1.93
VARS-222ENST00000470953 A0A1B0GVX0 72 aa2.98□□□□□ -1.93
VARS-222ENST00000470953 LINC00472Q9H8W2 130 aa2.98□□□□□ -1.93
VARS-222ENST00000470953 KRTAP3-3Q9BYR6 98 aa2.97□□□□□ -1.93
VARS-222ENST00000470953 KRTAP3-2Q9BYR7 98 aa2.97□□□□□ -1.93
VARS-222ENST00000470953 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
VARS-222ENST00000470953 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
VARS-222ENST00000470953 A8MWP4 228 aa2.95□□□□□ -1.94
VARS-222ENST00000470953 KRTAP16-1A8MUX0 517 aa2.94□□□□□ -1.94
VARS-222ENST00000470953 ROMO1P60602 79 aa2.94□□□□□ -1.94
VARS-222ENST00000470953 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
VARS-222ENST00000470953 SPRR2DP22532 72 aa2.93□□□□□ -1.94
VARS-222ENST00000470953 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
VARS-222ENST00000470953 C8orf17Q9NRJ1 99 aa2.93□□□□□ -1.94
VARS-222ENST00000470953 LCE3BQ5TA77 95 aa2.92□□□□□ -1.94
VARS-222ENST00000470953 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
VARS-222ENST00000470953 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
VARS-222ENST00000470953 H0Y9P7 68 aa2.9□□□□□ -1.95
VARS-222ENST00000470953 K7EQZ3 153 aa2.89□□□□□ -1.95
VARS-222ENST00000470953 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
VARS-222ENST00000470953 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
VARS-222ENST00000470953 MRPL34Q9BQ48 92 aaKnown RBP2.89□□□□□ -1.95
VARS-222ENST00000470953 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
VARS-222ENST00000470953 SPINK7P58062 85 aa2.88□□□□□ -1.95
VARS-222ENST00000470953 COA5Q86WW8 74 aa2.88□□□□□ -1.95
VARS-222ENST00000470953 WFDC13Q8IUB5 93 aa2.88□□□□□ -1.95
VARS-222ENST00000470953 HRES1P13985 223 aa2.87□□□□□ -1.95
VARS-222ENST00000470953 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
VARS-222ENST00000470953 CSAG1Q6PB30 78 aa2.86□□□□□ -1.95
VARS-222ENST00000470953 IGKV2D-30A0A075B6S6 120 aa2.85□□□□□ -1.95
VARS-222ENST00000470953 IGKV2-30P06310 120 aa2.85□□□□□ -1.95
VARS-222ENST00000470953 MIR22HGQ0VDD5 57 aa2.85□□□□□ -1.95
VARS-222ENST00000470953 ADM2Q7Z4H4 148 aa2.85□□□□□ -1.95
VARS-222ENST00000470953 Q8N9L7 120 aa2.85□□□□□ -1.95
VARS-222ENST00000470953 K7ERS5 55 aa2.84□□□□□ -1.95
VARS-222ENST00000470953 UQCR11O14957 56 aa2.83□□□□□ -1.96
VARS-222ENST00000470953 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
VARS-222ENST00000470953 DMAC1Q96GE9 116 aa2.81□□□□□ -1.96
VARS-222ENST00000470953 Q5W150 140 aa2.79□□□□□ -1.96
VARS-222ENST00000470953 H1FX-AS1Q4G0G2 97 aa2.78□□□□□ -1.96
VARS-222ENST00000470953 P0C880 135 aa2.77□□□□□ -1.97
VARS-222ENST00000470953 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
VARS-222ENST00000470953 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
VARS-222ENST00000470953 TP53AIP1Q9HCN2 124 aa2.77□□□□□ -1.97
VARS-222ENST00000470953 S4R3F8 94 aa2.73□□□□□ -1.97
VARS-222ENST00000470953 A0A1B0GU69 56 aa2.72□□□□□ -1.97
VARS-222ENST00000470953 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
VARS-222ENST00000470953 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
VARS-222ENST00000470953 MT1BP07438 61 aa2.7□□□□□ -1.98
VARS-222ENST00000470953 ACYP2P14621 99 aa2.7□□□□□ -1.98
VARS-222ENST00000470953 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
VARS-222ENST00000470953 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
VARS-222ENST00000470953 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
VARS-222ENST00000470953 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
VARS-222ENST00000470953 MT4P47944 62 aa2.66□□□□□ -1.98
VARS-222ENST00000470953 KRTAP3-1Q9BYR8 98 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms