RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
PTP4A1-202ENST00000470661 BPY2O14599 106 aa3.23□□□□□ -1.89
PTP4A1-202ENST00000470661 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
PTP4A1-202ENST00000470661 Q5W150 140 aa3.23□□□□□ -1.89
PTP4A1-202ENST00000470661 WFDC13Q8IUB5 93 aa3.23□□□□□ -1.89
PTP4A1-202ENST00000470661 NDUFS5O43920 106 aa3.22□□□□□ -1.89
PTP4A1-202ENST00000470661 PDE6GP18545 87 aa3.22□□□□□ -1.89
PTP4A1-202ENST00000470661 SPCS1Q9Y6A9 102 aa3.22□□□□□ -1.89
PTP4A1-202ENST00000470661 MRPL34Q9BQ48 92 aaKnown RBP3.21□□□□□ -1.9
PTP4A1-202ENST00000470661 hDV103S1A0JD37 113 aa3.2□□□□□ -1.9
PTP4A1-202ENST00000470661 PCP4L1A6NKN8 68 aa3.2□□□□□ -1.9
PTP4A1-202ENST00000470661 H3BT86 120 aa3.2□□□□□ -1.9
PTP4A1-202ENST00000470661 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1-202ENST00000470661 TMEM254Q8TBM7 123 aa3.19□□□□□ -1.9
PTP4A1-202ENST00000470661 A0A1B0GW54 56 aa3.18□□□□□ -1.9
PTP4A1-202ENST00000470661 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
PTP4A1-202ENST00000470661 HCG22E2RYF7 251 aa3.17□□□□□ -1.9
PTP4A1-202ENST00000470661 COL5A1-AS1Q5SY13 56 aa3.17□□□□□ -1.9
PTP4A1-202ENST00000470661 K7EP34 96 aa3.16□□□□□ -1.9
PTP4A1-202ENST00000470661 CASC2Q6XLA1 102 aa3.16□□□□□ -1.9
PTP4A1-202ENST00000470661 C4orf26Q17RF5 130 aa3.15□□□□□ -1.91
PTP4A1-202ENST00000470661 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
PTP4A1-202ENST00000470661 H1FX-AS1Q4G0G2 97 aa3.13□□□□□ -1.91
PTP4A1-202ENST00000470661 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
PTP4A1-202ENST00000470661 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
PTP4A1-202ENST00000470661 ETDBQ3ZM63 59 aa3.12□□□□□ -1.91
PTP4A1-202ENST00000470661 C5orf47Q569G3 176 aa3.09□□□□□ -1.91
PTP4A1-202ENST00000470661 C7orf65Q6ZTY9 151 aa3.09□□□□□ -1.91
PTP4A1-202ENST00000470661 UBL5Q9BZL1 73 aa3.09□□□□□ -1.91
PTP4A1-202ENST00000470661 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.92
PTP4A1-202ENST00000470661 A0A087WVE0 104 aa3.08□□□□□ -1.92
PTP4A1-202ENST00000470661 GTF2H5Q6ZYL4 71 aa3.07□□□□□ -1.92
PTP4A1-202ENST00000470661 F8W1H4 67 aa3.06□□□□□ -1.92
PTP4A1-202ENST00000470661 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
PTP4A1-202ENST00000470661 C1orf64Q8NEQ6 169 aa3.06□□□□□ -1.92
PTP4A1-202ENST00000470661 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
PTP4A1-202ENST00000470661 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
PTP4A1-202ENST00000470661 LCA10Q71F78 164 aa3.04□□□□□ -1.92
PTP4A1-202ENST00000470661 S4R3F8 94 aa3.03□□□□□ -1.92
PTP4A1-202ENST00000470661 CYP4F30PQ9H0H9 118 aa3.02□□□□□ -1.93
PTP4A1-202ENST00000470661 FAM236AA0A1B0GUQ0 79 aa3.01□□□□□ -1.93
PTP4A1-202ENST00000470661 FAM236BA0A1B0GV22 79 aa3.01□□□□□ -1.93
PTP4A1-202ENST00000470661 A0A1B0GV90 55 aa3□□□□□ -1.93
PTP4A1-202ENST00000470661 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
PTP4A1-202ENST00000470661 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
PTP4A1-202ENST00000470661 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
PTP4A1-202ENST00000470661 MT1BP07438 61 aa2.98□□□□□ -1.93
PTP4A1-202ENST00000470661 H0Y9P7 68 aa2.96□□□□□ -1.94
PTP4A1-202ENST00000470661 TRAV22A0A0B4J277 110 aa2.95□□□□□ -1.94
PTP4A1-202ENST00000470661 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
PTP4A1-202ENST00000470661 KLKP1Q107X0 134 aa2.95□□□□□ -1.94
PTP4A1-202ENST00000470661 ACYP1P07311 99 aa2.94□□□□□ -1.94
PTP4A1-202ENST00000470661 LOC101927531A0A1B0GV80 90 aa2.93□□□□□ -1.94
PTP4A1-202ENST00000470661 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
PTP4A1-202ENST00000470661 FAM240AA0A1B0GVK7 77 aa2.92□□□□□ -1.94
PTP4A1-202ENST00000470661 UQCRQO14949 82 aa2.92□□□□□ -1.94
PTP4A1-202ENST00000470661 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
PTP4A1-202ENST00000470661 Q5VV11 94 aa2.92□□□□□ -1.94
PTP4A1-202ENST00000470661 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
PTP4A1-202ENST00000470661 A6NN06 94 aa2.91□□□□□ -1.94
PTP4A1-202ENST00000470661 LINC00643Q86TS7 51 aa2.91□□□□□ -1.94
PTP4A1-202ENST00000470661 NEBP20929 6669 aa2.9□□□□□ -1.94
PTP4A1-202ENST00000470661 ATP5EP2Q5VTU8 51 aa2.9□□□□□ -1.95
PTP4A1-202ENST00000470661 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.95
PTP4A1-202ENST00000470661 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
PTP4A1-202ENST00000470661 ADM2Q7Z4H4 148 aa2.89□□□□□ -1.95
PTP4A1-202ENST00000470661 NDUFC1O43677 76 aa2.88□□□□□ -1.95
PTP4A1-202ENST00000470661 KMT2DO14686 5537 aa2.87□□□□□ -1.95
PTP4A1-202ENST00000470661 SEC61GP60059 68 aa2.87□□□□□ -1.95
PTP4A1-202ENST00000470661 ATOX1O00244 68 aa2.86□□□□□ -1.95
PTP4A1-202ENST00000470661 P0C880 135 aa2.85□□□□□ -1.95
PTP4A1-202ENST00000470661 IMUPQ9GZP8 106 aa2.85□□□□□ -1.95
PTP4A1-202ENST00000470661 MP68P56378 58 aa2.84□□□□□ -1.95
PTP4A1-202ENST00000470661 CAMK2N1Q7Z7J9 78 aa2.84□□□□□ -1.95
PTP4A1-202ENST00000470661 SCGB1A1P11684 91 aa2.83□□□□□ -1.96
PTP4A1-202ENST00000470661 MT-ATP8P03928 68 aa2.82□□□□□ -1.96
PTP4A1-202ENST00000470661 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
PTP4A1-202ENST00000470661 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
PTP4A1-202ENST00000470661 A8MUN3 132 aa2.79□□□□□ -1.96
PTP4A1-202ENST00000470661 H0YAA0 97 aa2.79□□□□□ -1.96
PTP4A1-202ENST00000470661 MT1XP80297 61 aa2.79□□□□□ -1.96
PTP4A1-202ENST00000470661 LINC01554Q52M75 96 aa2.79□□□□□ -1.96
PTP4A1-202ENST00000470661 J3QR89 54 aa2.78□□□□□ -1.96
PTP4A1-202ENST00000470661 M0QZ58 72 aa2.77□□□□□ -1.97
PTP4A1-202ENST00000470661 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
PTP4A1-202ENST00000470661 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
PTP4A1-202ENST00000470661 PLAC4Q8WY50 150 aa2.75□□□□□ -1.97
PTP4A1-202ENST00000470661 R4GN34 69 aa2.75□□□□□ -1.97
PTP4A1-202ENST00000470661 H3BPC8 53 aa2.74□□□□□ -1.97
PTP4A1-202ENST00000470661 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
PTP4A1-202ENST00000470661 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
PTP4A1-202ENST00000470661 ACYP2P14621 99 aa2.7□□□□□ -1.98
PTP4A1-202ENST00000470661 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
PTP4A1-202ENST00000470661 K7ERU9 68 aa2.69□□□□□ -1.98
PTP4A1-202ENST00000470661 SPRR2EP22531 72 aa2.68□□□□□ -1.98
PTP4A1-202ENST00000470661 SPRR2BP35325 72 aa2.68□□□□□ -1.98
PTP4A1-202ENST00000470661 SPRR2AP35326 72 aa2.68□□□□□ -1.98
PTP4A1-202ENST00000470661 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
PTP4A1-202ENST00000470661 C20orf197Q8N268 126 aa2.68□□□□□ -1.98
PTP4A1-202ENST00000470661 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms