RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
ATPAF1-203ENST00000460928 COX17Q14061 63 aa2.91□□□□□ -1.94
ATPAF1-203ENST00000460928 Q6ZSA8 131 aa2.91□□□□□ -1.94
ATPAF1-203ENST00000460928 KRTAP11-1Q8IUC1 163 aa2.91□□□□□ -1.94
ATPAF1-203ENST00000460928 CIRBP-AS1Q8TBR5 109 aa2.91□□□□□ -1.94
ATPAF1-203ENST00000460928 LINC00158P58513 81 aa2.9□□□□□ -1.95
ATPAF1-203ENST00000460928 Q8NDZ9 215 aa2.9□□□□□ -1.95
ATPAF1-203ENST00000460928 H0Y9P7 68 aa2.89□□□□□ -1.95
ATPAF1-203ENST00000460928 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
ATPAF1-203ENST00000460928 Q8IZM0 81 aa2.89□□□□□ -1.95
ATPAF1-203ENST00000460928 SPACA4Q8TDM5 124 aa2.89□□□□□ -1.95
ATPAF1-203ENST00000460928 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
ATPAF1-203ENST00000460928 COA5Q86WW8 74 aa2.88□□□□□ -1.95
ATPAF1-203ENST00000460928 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
ATPAF1-203ENST00000460928 ROMO1P60602 79 aa2.87□□□□□ -1.95
ATPAF1-203ENST00000460928 Q5VSD8 79 aa2.87□□□□□ -1.95
ATPAF1-203ENST00000460928 LRP1Q07954 4544 aaKnown RBP2.87□□□□□ -1.95
ATPAF1-203ENST00000460928 A0A1W2PNM2 257 aa2.86□□□□□ -1.95
ATPAF1-203ENST00000460928 SPAG11AQ6PDA7 123 aa2.86□□□□□ -1.95
ATPAF1-203ENST00000460928 Q6ZQY7 126 aa2.86□□□□□ -1.95
ATPAF1-203ENST00000460928 FAT3Q8TDW7 4589 aa2.85□□□□□ -1.95
ATPAF1-203ENST00000460928 TLX1NBP0CAT3 122 aa2.85□□□□□ -1.95
ATPAF1-203ENST00000460928 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
ATPAF1-203ENST00000460928 A0A087WSZ3 146 aa2.84□□□□□ -1.95
ATPAF1-203ENST00000460928 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
ATPAF1-203ENST00000460928 KRTAP10-8P60410 259 aa2.84□□□□□ -1.95
ATPAF1-203ENST00000460928 RPL37AP61513 92 aaKnown RBP2.84□□□□□ -1.95
ATPAF1-203ENST00000460928 LRP2P98164 4655 aa2.84□□□□□ -1.96
ATPAF1-203ENST00000460928 IGLV5-48A0A075B6I7 105 aa2.83□□□□□ -1.96
ATPAF1-203ENST00000460928 SPINK7P58062 85 aa2.83□□□□□ -1.96
ATPAF1-203ENST00000460928 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
ATPAF1-203ENST00000460928 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
ATPAF1-203ENST00000460928 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
ATPAF1-203ENST00000460928 TNXBP22105 4242 aa2.82□□□□□ -1.96
ATPAF1-203ENST00000460928 ZNF861PO60384 105 aa2.82□□□□□ -1.96
ATPAF1-203ENST00000460928 C1orf137Q5JT78 98 aa2.82□□□□□ -1.96
ATPAF1-203ENST00000460928 SPRR4Q96PI1 79 aa2.82□□□□□ -1.96
ATPAF1-203ENST00000460928 CSAG1Q6PB30 78 aa2.81□□□□□ -1.96
ATPAF1-203ENST00000460928 Q8N9L7 120 aa2.81□□□□□ -1.96
ATPAF1-203ENST00000460928 UQCR11O14957 56 aa2.8□□□□□ -1.96
ATPAF1-203ENST00000460928 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
ATPAF1-203ENST00000460928 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
ATPAF1-203ENST00000460928 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
ATPAF1-203ENST00000460928 PRLHP81277 87 aa2.79□□□□□ -1.96
ATPAF1-203ENST00000460928 MIR22HGQ0VDD5 57 aa2.79□□□□□ -1.96
ATPAF1-203ENST00000460928 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
ATPAF1-203ENST00000460928 IGLV1-50A0A075B6I6 118 aa2.78□□□□□ -1.96
ATPAF1-203ENST00000460928 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
ATPAF1-203ENST00000460928 TP53AIP1Q9HCN2 124 aa2.78□□□□□ -1.96
ATPAF1-203ENST00000460928 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
ATPAF1-203ENST00000460928 K7EQZ3 153 aa2.76□□□□□ -1.97
ATPAF1-203ENST00000460928 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
ATPAF1-203ENST00000460928 KRTAP13-1Q8IUC0 172 aa2.76□□□□□ -1.97
ATPAF1-203ENST00000460928 DMAC1Q96GE9 116 aa2.76□□□□□ -1.97
ATPAF1-203ENST00000460928 A0A1B0GVX0 72 aa2.75□□□□□ -1.97
ATPAF1-203ENST00000460928 K7ERS5 55 aa2.75□□□□□ -1.97
ATPAF1-203ENST00000460928 LINC00483Q53H64 154 aa2.75□□□□□ -1.97
ATPAF1-203ENST00000460928 A8MWP4 228 aa2.74□□□□□ -1.97
ATPAF1-203ENST00000460928 HRES1P13985 223 aa2.74□□□□□ -1.97
ATPAF1-203ENST00000460928 SPRR1AP35321 89 aa2.74□□□□□ -1.97
ATPAF1-203ENST00000460928 SPINK6Q6UWN8 80 aa2.74□□□□□ -1.97
ATPAF1-203ENST00000460928 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
ATPAF1-203ENST00000460928 A0A1B0GU69 56 aa2.72□□□□□ -1.97
ATPAF1-203ENST00000460928 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
ATPAF1-203ENST00000460928 A0A0G2JQZ4 141 aa2.71□□□□□ -1.98
ATPAF1-203ENST00000460928 P0C880 135 aa2.71□□□□□ -1.98
ATPAF1-203ENST00000460928 ACYP2P14621 99 aa2.71□□□□□ -1.98
ATPAF1-203ENST00000460928 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
ATPAF1-203ENST00000460928 Q6ZRX8 168 aa2.71□□□□□ -1.98
ATPAF1-203ENST00000460928 C20orf166-AS1Q96NR2 134 aa2.71□□□□□ -1.98
ATPAF1-203ENST00000460928 WFDC13Q8IUB5 93 aa2.7□□□□□ -1.98
ATPAF1-203ENST00000460928 DEFB105AQ8NG35 78 aa2.7□□□□□ -1.98
ATPAF1-203ENST00000460928 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
ATPAF1-203ENST00000460928 C8orf17Q9NRJ1 99 aa2.68□□□□□ -1.98
ATPAF1-203ENST00000460928 Q5W150 140 aa2.67□□□□□ -1.98
ATPAF1-203ENST00000460928 A8MUU9 505 aa2.66□□□□□ -1.98
ATPAF1-203ENST00000460928 LPAP08519 4548 aa2.66□□□□□ -1.98
ATPAF1-203ENST00000460928 MMP24-AS1A0A0U1RRL7 71 aa2.65□□□□□ -1.99
ATPAF1-203ENST00000460928 LINC00472Q9H8W2 130 aa2.65□□□□□ -1.99
ATPAF1-203ENST00000460928 PCOTHQ58A44 107 aa2.64□□□□□ -1.99
ATPAF1-203ENST00000460928 LINC00304Q8N9R0 145 aa2.64□□□□□ -1.99
ATPAF1-203ENST00000460928 SPRR1BP22528 89 aa2.63□□□□□ -1.99
ATPAF1-203ENST00000460928 IGFL1Q6UW32 110 aa2.61□□□□□ -1.99
ATPAF1-203ENST00000460928 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
ATPAF1-203ENST00000460928 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
ATPAF1-203ENST00000460928 SPINT4Q6UDR6 99 aa2.59□□□□□ -1.99
ATPAF1-203ENST00000460928 SSBP3-AS1Q7Z2R9 100 aa2.59□□□□□ -1.99
ATPAF1-203ENST00000460928 MRPL34Q9BQ48 92 aaKnown RBP2.58□□□□□ -2
ATPAF1-203ENST00000460928 MUC17Q685J3 4493 aa2.56□□□□□ -2
ATPAF1-203ENST00000460928 C9orf92A6NGG3 77 aa2.56□□□□□ -2
ATPAF1-203ENST00000460928 SPINK1P00995 79 aa2.56□□□□□ -2
ATPAF1-203ENST00000460928 Q96NJ1 140 aa2.54□□□□□ -2
ATPAF1-203ENST00000460928 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
ATPAF1-203ENST00000460928 KRTAP4-1Q9BYQ7 146 aa2.52□□□□□ -2.01
ATPAF1-203ENST00000460928 RPS29P62273 56 aaKnown RBP2.51□□□□□ -2.01
ATPAF1-203ENST00000460928 TPRXLQ17RH7 258 aa2.5□□□□□ -2.01
ATPAF1-203ENST00000460928 H0YAA0 97 aa2.49□□□□□ -2.01
ATPAF1-203ENST00000460928 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
ATPAF1-203ENST00000460928 A0A1B0GU33 70 aa2.47□□□□□ -2.01
ATPAF1-203ENST00000460928 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms