RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
NIF3L1-209ENST00000454952 Q5W150 140 aa3.62□□□□□ -1.83
NIF3L1-209ENST00000454952 CASC2Q6XLA1 102 aa3.62□□□□□ -1.83
NIF3L1-209ENST00000454952 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
NIF3L1-209ENST00000454952 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
NIF3L1-209ENST00000454952 MT1BP07438 61 aa3.61□□□□□ -1.83
NIF3L1-209ENST00000454952 S4R3F8 94 aa3.61□□□□□ -1.83
NIF3L1-209ENST00000454952 HCG22E2RYF7 251 aa3.6□□□□□ -1.83
NIF3L1-209ENST00000454952 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
NIF3L1-209ENST00000454952 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
NIF3L1-209ENST00000454952 NAA38Q9BRA0 125 aaKnown RBP3.59□□□□□ -1.83
NIF3L1-209ENST00000454952 H3BT86 120 aa3.58□□□□□ -1.84
NIF3L1-209ENST00000454952 KLKP1Q107X0 134 aa3.57□□□□□ -1.84
NIF3L1-209ENST00000454952 C1orf64Q8NEQ6 169 aa3.56□□□□□ -1.84
NIF3L1-209ENST00000454952 CRIPTQ9P021 101 aa3.56□□□□□ -1.84
NIF3L1-209ENST00000454952 LCA10Q71F78 164 aa3.55□□□□□ -1.84
NIF3L1-209ENST00000454952 IMUPQ9GZP8 106 aa3.55□□□□□ -1.84
NIF3L1-209ENST00000454952 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
NIF3L1-209ENST00000454952 K7ERU9 68 aa3.54□□□□□ -1.84
NIF3L1-209ENST00000454952 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
NIF3L1-209ENST00000454952 Q8N9L7 120 aa3.54□□□□□ -1.84
NIF3L1-209ENST00000454952 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
NIF3L1-209ENST00000454952 TP53AIP1Q9HCN2 124 aa3.52□□□□□ -1.85
NIF3L1-209ENST00000454952 V9GYY9 64 aa3.52□□□□□ -1.85
NIF3L1-209ENST00000454952 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
NIF3L1-209ENST00000454952 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
NIF3L1-209ENST00000454952 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
NIF3L1-209ENST00000454952 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
NIF3L1-209ENST00000454952 A0A1W2PPM0 123 aa3.48□□□□□ -1.85
NIF3L1-209ENST00000454952 BATFQ16520 125 aa3.48□□□□□ -1.85
NIF3L1-209ENST00000454952 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
NIF3L1-209ENST00000454952 KMT2DO14686 5537 aa3.46□□□□□ -1.86
NIF3L1-209ENST00000454952 H0YAA0 97 aa3.44□□□□□ -1.86
NIF3L1-209ENST00000454952 MT3P25713 68 aa3.44□□□□□ -1.86
NIF3L1-209ENST00000454952 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
NIF3L1-209ENST00000454952 NDUFC1O43677 76 aa3.43□□□□□ -1.86
NIF3L1-209ENST00000454952 SPRR2EP22531 72 aa3.43□□□□□ -1.86
NIF3L1-209ENST00000454952 SPRR2BP35325 72 aa3.43□□□□□ -1.86
NIF3L1-209ENST00000454952 SPRR2AP35326 72 aa3.43□□□□□ -1.86
NIF3L1-209ENST00000454952 CYP4F30PQ9H0H9 118 aa3.43□□□□□ -1.86
NIF3L1-209ENST00000454952 LOC101927531A0A1B0GV80 90 aa3.42□□□□□ -1.86
NIF3L1-209ENST00000454952 TAX1BP3O14907 124 aa3.42□□□□□ -1.86
NIF3L1-209ENST00000454952 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
NIF3L1-209ENST00000454952 SPCS1Q9Y6A9 102 aa3.42□□□□□ -1.86
NIF3L1-209ENST00000454952 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
NIF3L1-209ENST00000454952 TRAV22A0A0B4J277 110 aa3.4□□□□□ -1.87
NIF3L1-209ENST00000454952 A8MUN3 132 aa3.4□□□□□ -1.87
NIF3L1-209ENST00000454952 OCR1Q9BZK8 76 aa3.4□□□□□ -1.87
NIF3L1-209ENST00000454952 J3QR89 54 aa3.39□□□□□ -1.87
NIF3L1-209ENST00000454952 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
NIF3L1-209ENST00000454952 PLAC4Q8WY50 150 aa3.39□□□□□ -1.87
NIF3L1-209ENST00000454952 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
NIF3L1-209ENST00000454952 GTF2H5Q6ZYL4 71 aa3.38□□□□□ -1.87
NIF3L1-209ENST00000454952 A0A087WVE0 104 aa3.37□□□□□ -1.87
NIF3L1-209ENST00000454952 ATOX1O00244 68 aa3.36□□□□□ -1.87
NIF3L1-209ENST00000454952 ACYP1P07311 99 aa3.36□□□□□ -1.87
NIF3L1-209ENST00000454952 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
NIF3L1-209ENST00000454952 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
NIF3L1-209ENST00000454952 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
NIF3L1-209ENST00000454952 MT1XP80297 61 aa3.35□□□□□ -1.87
NIF3L1-209ENST00000454952 C20orf197Q8N268 126 aa3.34□□□□□ -1.87
NIF3L1-209ENST00000454952 SMIM20Q8N5G0 67 aa3.34□□□□□ -1.87
NIF3L1-209ENST00000454952 PRO0461Q9UI25 63 aa3.34□□□□□ -1.87
NIF3L1-209ENST00000454952 UQCRQO14949 82 aa3.33□□□□□ -1.88
NIF3L1-209ENST00000454952 SPRR2DP22532 72 aa3.33□□□□□ -1.88
NIF3L1-209ENST00000454952 K7EP34 96 aa3.32□□□□□ -1.88
NIF3L1-209ENST00000454952 R4GN34 69 aa3.32□□□□□ -1.88
NIF3L1-209ENST00000454952 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
NIF3L1-209ENST00000454952 H0Y9P7 68 aa3.3□□□□□ -1.88
NIF3L1-209ENST00000454952 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
NIF3L1-209ENST00000454952 ATP5EP2Q5VTU8 51 aa3.29□□□□□ -1.88
NIF3L1-209ENST00000454952 ANAPC13Q9BS18 74 aa3.29□□□□□ -1.88
NIF3L1-209ENST00000454952 F8W1H4 67 aa3.28□□□□□ -1.88
NIF3L1-209ENST00000454952 M0QZ58 72 aa3.26□□□□□ -1.89
NIF3L1-209ENST00000454952 HIST1H4AP62805 103 aaKnown RBP3.26□□□□□ -1.89
NIF3L1-209ENST00000454952 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
NIF3L1-209ENST00000454952 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
NIF3L1-209ENST00000454952 P0C880 135 aa3.23□□□□□ -1.89
NIF3L1-209ENST00000454952 MP68P56378 58 aa3.23□□□□□ -1.89
NIF3L1-209ENST00000454952 LINC00208Q96KT6 92 aa3.23□□□□□ -1.89
NIF3L1-209ENST00000454952 LINC01554Q52M75 96 aa3.22□□□□□ -1.89
NIF3L1-209ENST00000454952 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
NIF3L1-209ENST00000454952 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
NIF3L1-209ENST00000454952 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
NIF3L1-209ENST00000454952 SMIM26A0A096LP01 95 aa3.17□□□□□ -1.9
NIF3L1-209ENST00000454952 H3BPC8 53 aa3.17□□□□□ -1.9
NIF3L1-209ENST00000454952 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
NIF3L1-209ENST00000454952 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
NIF3L1-209ENST00000454952 DMAC1Q96GE9 116 aa3.17□□□□□ -1.9
NIF3L1-209ENST00000454952 PSPHP1O15172 72 aa3.16□□□□□ -1.9
NIF3L1-209ENST00000454952 MT-ATP8P03928 68 aa3.16□□□□□ -1.9
NIF3L1-209ENST00000454952 TMEM258P61165 79 aa3.15□□□□□ -1.91
NIF3L1-209ENST00000454952 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
NIF3L1-209ENST00000454952 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
NIF3L1-209ENST00000454952 TRAV7A0A075B6U4 112 aa3.12□□□□□ -1.91
NIF3L1-209ENST00000454952 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
NIF3L1-209ENST00000454952 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.91
NIF3L1-209ENST00000454952 ACYP2P14621 99 aa3.08□□□□□ -1.92
NIF3L1-209ENST00000454952 COX7CP15954 63 aa3.08□□□□□ -1.92
NIF3L1-209ENST00000454952 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms