RNA–Protein interactions for RNA: ENST00000439415.1

CBX1P4-201, Transcript of chromobox 1 pseudogene 4, humanhuman

BASIC

Gene CBX1P4, Length 457 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P4-201ENST00000439415 CRIP1P50238 77 aa1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 COX17Q14061 63 aa1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 LRP1Q07954 4544 aaKnown RBP1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 SRRM2Q9UQ35 2752 aaKnown RBP1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 KRTAP13-1Q8IUC0 172 aa1.9□□□□□ -2.11
CBX1P4-201ENST00000439415 DEFB108BQ8NET1 73 aa1.9□□□□□ -2.11
CBX1P4-201ENST00000439415 Q6ZQY7 126 aa1.89□□□□□ -2.11
CBX1P4-201ENST00000439415 SMIM11BQ8TCY0 68 aa1.89□□□□□ -2.11
CBX1P4-201ENST00000439415 LINC00158P58513 81 aa1.88□□□□□ -2.11
CBX1P4-201ENST00000439415 LY6G6CO95867 125 aa1.87□□□□□ -2.11
CBX1P4-201ENST00000439415 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
CBX1P4-201ENST00000439415 TNXBP22105 4242 aa1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 RPS27P42677 84 aaKnown RBP1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 PRB3Q04118 309 aaPredicted RBP1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 ACYP2P14621 99 aa1.85□□□□□ -2.11
CBX1P4-201ENST00000439415 FLG2Q5D862 2391 aaPredicted RBP1.85□□□□□ -2.11
CBX1P4-201ENST00000439415 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 G3V318 75 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 LINC00575Q6W349 94 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 CDKN2A-AS1Q9UH64 79 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 POLR2KP53803 58 aaKnown RBP1.83□□□□□ -2.12
CBX1P4-201ENST00000439415 SPINK9Q5DT21 86 aa1.83□□□□□ -2.12
CBX1P4-201ENST00000439415 Q8IZM0 81 aa1.83□□□□□ -2.12
CBX1P4-201ENST00000439415 SORL1Q92673 2214 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 RPL39P62891 51 aaKnown RBP1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 LPAP08519 4548 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 MRPL33O75394 65 aaKnown RBP1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 PIGYQ3MUY2 71 aa1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 C10orf99Q6UWK7 81 aa1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 RPL39LQ96EH5 51 aaKnown RBP1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 I3L2K1 104 aa1.79□□□□□ -2.12
CBX1P4-201ENST00000439415 ANGP03950 147 aaKnown RBP1.79□□□□□ -2.12
CBX1P4-201ENST00000439415 PRCDQ00LT1 54 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 Q6ZRX8 168 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 CRIPTQ9P021 101 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 GVQW2A0A096LPI5 108 aaPredicted RBP1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 H3BUX3 64 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 K7EQZ3 153 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
CBX1P4-201ENST00000439415 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
CBX1P4-201ENST00000439415 LEAP2Q969E1 77 aa1.76□□□□□ -2.13
CBX1P4-201ENST00000439415 DEFB136Q30KP8 78 aa1.75□□□□□ -2.13
CBX1P4-201ENST00000439415 LELP1Q5T871 98 aa1.74□□□□□ -2.13
CBX1P4-201ENST00000439415 Q5VSD8 79 aa1.74□□□□□ -2.13
CBX1P4-201ENST00000439415 Q6ZSA8 131 aa1.74□□□□□ -2.13
CBX1P4-201ENST00000439415 H0YAA0 97 aa1.73□□□□□ -2.13
CBX1P4-201ENST00000439415 SPINK13Q1W4C9 94 aa1.73□□□□□ -2.13
CBX1P4-201ENST00000439415 IGLV5-48A0A075B6I7 105 aa1.72□□□□□ -2.13
CBX1P4-201ENST00000439415 WFDC13Q8IUB5 93 aa1.72□□□□□ -2.13
CBX1P4-201ENST00000439415 COX6A2Q02221 97 aa1.71□□□□□ -2.14
CBX1P4-201ENST00000439415 TP53AIP1Q9HCN2 124 aa1.71□□□□□ -2.14
CBX1P4-201ENST00000439415 C6orf48Q9UBA6 75 aa1.71□□□□□ -2.14
CBX1P4-201ENST00000439415 M0QY20 66 aa1.7□□□□□ -2.14
CBX1P4-201ENST00000439415 SMR3BP02814 79 aaPredicted RBP1.7□□□□□ -2.14
CBX1P4-201ENST00000439415 MINOS1Q5TGZ0 78 aa1.7□□□□□ -2.14
CBX1P4-201ENST00000439415 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
CBX1P4-201ENST00000439415 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
CBX1P4-201ENST00000439415 APLNQ9ULZ1 77 aa1.69□□□□□ -2.14
CBX1P4-201ENST00000439415 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 WFDC10BQ8IUB3 73 aa1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 MRPL34Q9BQ48 92 aaKnown RBP1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 WT1-ASQ06250 92 aa1.67□□□□□ -2.14
CBX1P4-201ENST00000439415 RPL39P5Q59GN2 51 aa1.67□□□□□ -2.14
CBX1P4-201ENST00000439415 MUC17Q685J3 4493 aa1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 TMEM167AQ8TBQ9 72 aa1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 DEFB104AQ8WTQ1 72 aa1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 MMP24-AS1A0A0U1RRL7 71 aa1.65□□□□□ -2.15
CBX1P4-201ENST00000439415 COX6B2Q6YFQ2 88 aa1.64□□□□□ -2.15
CBX1P4-201ENST00000439415 KAAG1Q9UBP8 84 aa1.64□□□□□ -2.15
CBX1P4-201ENST00000439415 A8MTW9 85 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 APELAP0DMC3 54 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB135Q30KP9 77 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB4AO15263 64 aa1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 UBE2DNLQ8IWF7 75 aa1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
CBX1P4-201ENST00000439415 USH2AO75445 5202 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 K7EIM0 57 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB130BP0DP73 79 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB130AP0DP74 79 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB131AP59861 70 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 CLPSL2Q6UWE3 100 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 USMG5Q96IX5 58 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 TOMM7Q9P0U1 55 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.16
CBX1P4-201ENST00000439415 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
CBX1P4-201ENST00000439415 NEBP20929 6669 aa1.55□□□□□ -2.16
CBX1P4-201ENST00000439415 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms