RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
NUP50-206ENST00000422489 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
NUP50-206ENST00000422489 TP53AIP1Q9HCN2 124 aa4.29□□□□□ -1.72
NUP50-206ENST00000422489 S4R3F8 94 aa4.29□□□□□ -1.72
NUP50-206ENST00000422489 F8W1H4 67 aa4.28□□□□□ -1.72
NUP50-206ENST00000422489 ETDBQ3ZM63 59 aa4.28□□□□□ -1.72
NUP50-206ENST00000422489 CSAG1Q6PB30 78 aa4.28□□□□□ -1.72
NUP50-206ENST00000422489 LCA10Q71F78 164 aa4.25□□□□□ -1.73
NUP50-206ENST00000422489 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
NUP50-206ENST00000422489 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
NUP50-206ENST00000422489 SCGB1A1P11684 91 aa4.2□□□□□ -1.74
NUP50-206ENST00000422489 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
NUP50-206ENST00000422489 Q5VV11 94 aa4.19□□□□□ -1.74
NUP50-206ENST00000422489 ACYP1P07311 99 aa4.18□□□□□ -1.74
NUP50-206ENST00000422489 HIST1H4AP62805 103 aaKnown RBP4.18□□□□□ -1.74
NUP50-206ENST00000422489 A0A087WVE0 104 aa4.17□□□□□ -1.74
NUP50-206ENST00000422489 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
NUP50-206ENST00000422489 LOC101927531A0A1B0GV80 90 aa4.17□□□□□ -1.74
NUP50-206ENST00000422489 A6NN06 94 aa4.17□□□□□ -1.74
NUP50-206ENST00000422489 KLKP1Q107X0 134 aa4.17□□□□□ -1.74
NUP50-206ENST00000422489 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
NUP50-206ENST00000422489 MT1BP07438 61 aa4.16□□□□□ -1.74
NUP50-206ENST00000422489 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
NUP50-206ENST00000422489 H0Y9P7 68 aa4.14□□□□□ -1.75
NUP50-206ENST00000422489 UQCRQO14949 82 aa4.14□□□□□ -1.75
NUP50-206ENST00000422489 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
NUP50-206ENST00000422489 SMIM20Q8N5G0 67 aa4.14□□□□□ -1.75
NUP50-206ENST00000422489 V9GYY9 64 aa4.14□□□□□ -1.75
NUP50-206ENST00000422489 ATOX1O00244 68 aa4.11□□□□□ -1.75
NUP50-206ENST00000422489 NDUFC1O43677 76 aa4.11□□□□□ -1.75
NUP50-206ENST00000422489 ATP5EP2Q5VTU8 51 aa4.11□□□□□ -1.75
NUP50-206ENST00000422489 FAM240AA0A1B0GVK7 77 aa4.1□□□□□ -1.75
NUP50-206ENST00000422489 IMUPQ9GZP8 106 aa4.1□□□□□ -1.75
NUP50-206ENST00000422489 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
NUP50-206ENST00000422489 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
NUP50-206ENST00000422489 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
NUP50-206ENST00000422489 LINC00643Q86TS7 51 aa4.07□□□□□ -1.76
NUP50-206ENST00000422489 A8MUN3 132 aa4.04□□□□□ -1.76
NUP50-206ENST00000422489 K7ERU9 68 aa4.04□□□□□ -1.76
NUP50-206ENST00000422489 MP68P56378 58 aa4.04□□□□□ -1.76
NUP50-206ENST00000422489 ADM2Q7Z4H4 148 aa4.04□□□□□ -1.76
NUP50-206ENST00000422489 H0YAA0 97 aa4.02□□□□□ -1.77
NUP50-206ENST00000422489 OCR1Q9BZK8 76 aa4□□□□□ -1.77
NUP50-206ENST00000422489 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
NUP50-206ENST00000422489 A0A0A0MQY5 61 aa3.97□□□□□ -1.77
NUP50-206ENST00000422489 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
NUP50-206ENST00000422489 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
NUP50-206ENST00000422489 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
NUP50-206ENST00000422489 H3BPC8 53 aa3.94□□□□□ -1.78
NUP50-206ENST00000422489 J3QR89 54 aa3.94□□□□□ -1.78
NUP50-206ENST00000422489 R4GN34 69 aa3.94□□□□□ -1.78
NUP50-206ENST00000422489 NEBP20929 6669 aa3.93□□□□□ -1.78
NUP50-206ENST00000422489 P0C880 135 aa3.93□□□□□ -1.78
NUP50-206ENST00000422489 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
NUP50-206ENST00000422489 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
NUP50-206ENST00000422489 M0QZ58 72 aa3.91□□□□□ -1.78
NUP50-206ENST00000422489 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
NUP50-206ENST00000422489 C20orf197Q8N268 126 aa3.91□□□□□ -1.78
NUP50-206ENST00000422489 DMAC1Q96GE9 116 aa3.9□□□□□ -1.79
NUP50-206ENST00000422489 LINC01554Q52M75 96 aa3.89□□□□□ -1.79
NUP50-206ENST00000422489 MT1XP80297 61 aa3.88□□□□□ -1.79
NUP50-206ENST00000422489 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
NUP50-206ENST00000422489 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
NUP50-206ENST00000422489 ACYP2P14621 99 aa3.85□□□□□ -1.79
NUP50-206ENST00000422489 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
NUP50-206ENST00000422489 KMT2DO14686 5537 aa3.84□□□□□ -1.79
NUP50-206ENST00000422489 TRAV7A0A075B6U4 112 aa3.83□□□□□ -1.8
NUP50-206ENST00000422489 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
NUP50-206ENST00000422489 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
NUP50-206ENST00000422489 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
NUP50-206ENST00000422489 SPRR2EP22531 72 aa3.81□□□□□ -1.8
NUP50-206ENST00000422489 SPRR2BP35325 72 aa3.81□□□□□ -1.8
NUP50-206ENST00000422489 SPRR2AP35326 72 aa3.81□□□□□ -1.8
NUP50-206ENST00000422489 SPTSSBQ8NFR3 76 aa3.81□□□□□ -1.8
NUP50-206ENST00000422489 CHKB-CPT1BH3BT56 60 aa3.8□□□□□ -1.8
NUP50-206ENST00000422489 CCDC179H3BU77 68 aa3.8□□□□□ -1.8
NUP50-206ENST00000422489 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
NUP50-206ENST00000422489 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
NUP50-206ENST00000422489 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
NUP50-206ENST00000422489 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
NUP50-206ENST00000422489 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
NUP50-206ENST00000422489 SNURFQ9Y675 71 aa3.75□□□□□ -1.81
NUP50-206ENST00000422489 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
NUP50-206ENST00000422489 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
NUP50-206ENST00000422489 SPRR2DP22532 72 aa3.69□□□□□ -1.82
NUP50-206ENST00000422489 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
NUP50-206ENST00000422489 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
NUP50-206ENST00000422489 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
NUP50-206ENST00000422489 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
NUP50-206ENST00000422489 SERP2Q8N6R1 65 aa3.65□□□□□ -1.83
NUP50-206ENST00000422489 CAMK2N1Q7Z7J9 78 aa3.64□□□□□ -1.83
NUP50-206ENST00000422489 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
NUP50-206ENST00000422489 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
NUP50-206ENST00000422489 TMEM258P61165 79 aa3.61□□□□□ -1.83
NUP50-206ENST00000422489 COA5Q86WW8 74 aa3.59□□□□□ -1.83
NUP50-206ENST00000422489 SERP1Q9Y6X1 66 aa3.59□□□□□ -1.83
NUP50-206ENST00000422489 A0A0D9SG42 100 aa3.58□□□□□ -1.84
NUP50-206ENST00000422489 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
NUP50-206ENST00000422489 SPINT4Q6UDR6 99 aa3.55□□□□□ -1.84
NUP50-206ENST00000422489 SMIM26A0A096LP01 95 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms