RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SPINK6Q6UWN8 80 aa3.23□□□□□ -1.89
ECHDC1-206ENST00000417628 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
ECHDC1-206ENST00000417628 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
ECHDC1-206ENST00000417628 KLK12Q9UKR0 248 aa3.23□□□□□ -1.89
ECHDC1-206ENST00000417628 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
ECHDC1-206ENST00000417628 ZNF861PO60384 105 aa3.22□□□□□ -1.89
ECHDC1-206ENST00000417628 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-206ENST00000417628 C16orf74Q96GX8 76 aa3.22□□□□□ -1.89
ECHDC1-206ENST00000417628 NOP10Q9NPE3 64 aaKnown RBP3.22□□□□□ -1.89
ECHDC1-206ENST00000417628 INSP01308 110 aa3.21□□□□□ -1.9
ECHDC1-206ENST00000417628 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
ECHDC1-206ENST00000417628 C7orf33Q8WU49 177 aa3.21□□□□□ -1.9
ECHDC1-206ENST00000417628 PSORS1C2Q9UIG4 136 aa3.21□□□□□ -1.9
ECHDC1-206ENST00000417628 USH2AO75445 5202 aa3.21□□□□□ -1.9
ECHDC1-206ENST00000417628 A8MWP4 228 aa3.2□□□□□ -1.9
ECHDC1-206ENST00000417628 K7ERS5 55 aa3.2□□□□□ -1.9
ECHDC1-206ENST00000417628 REG3AQ06141 175 aa3.2□□□□□ -1.9
ECHDC1-206ENST00000417628 KRTAP26-1Q6PEX3 210 aa3.2□□□□□ -1.9
ECHDC1-206ENST00000417628 CHTF8P0CG12 524 aa3.19□□□□□ -1.9
ECHDC1-206ENST00000417628 HRES1P13985 223 aa3.19□□□□□ -1.9
ECHDC1-206ENST00000417628 DEFB1P60022 68 aa3.19□□□□□ -1.9
ECHDC1-206ENST00000417628 MT1HP80294 61 aa3.19□□□□□ -1.9
ECHDC1-206ENST00000417628 LINC01556Q5JQF7 62 aa3.19□□□□□ -1.9
ECHDC1-206ENST00000417628 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ECHDC1-206ENST00000417628 P0C880 135 aa3.18□□□□□ -1.9
ECHDC1-206ENST00000417628 C20orf166-AS1Q96NR2 134 aa3.18□□□□□ -1.9
ECHDC1-206ENST00000417628 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
ECHDC1-206ENST00000417628 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-206ENST00000417628 HTN1P15515 57 aa3.17□□□□□ -1.9
ECHDC1-206ENST00000417628 SPINK13Q1W4C9 94 aa3.17□□□□□ -1.9
ECHDC1-206ENST00000417628 A0A1B0GU69 56 aa3.16□□□□□ -1.9
ECHDC1-206ENST00000417628 ANGP03950 147 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-206ENST00000417628 CAMK2N2Q96S95 79 aa3.15□□□□□ -1.91
ECHDC1-206ENST00000417628 ANAPC11Q9NYG5 84 aa3.15□□□□□ -1.91
ECHDC1-206ENST00000417628 TRGV1A0A0A0MS02 117 aa3.14□□□□□ -1.91
ECHDC1-206ENST00000417628 ACYP2P14621 99 aa3.14□□□□□ -1.91
ECHDC1-206ENST00000417628 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
ECHDC1-206ENST00000417628 C8orf17Q9NRJ1 99 aa3.14□□□□□ -1.91
ECHDC1-206ENST00000417628 PRO0255Q9UI72 69 aa3.14□□□□□ -1.91
ECHDC1-206ENST00000417628 IGKV2-24A0A0C4DH68 120 aa3.13□□□□□ -1.91
ECHDC1-206ENST00000417628 A8MUU9 505 aa3.13□□□□□ -1.91
ECHDC1-206ENST00000417628 Q5W150 140 aa3.13□□□□□ -1.91
ECHDC1-206ENST00000417628 FAM168BA1KXE4 195 aa3.12□□□□□ -1.91
ECHDC1-206ENST00000417628 TPRXLQ17RH7 258 aa3.12□□□□□ -1.91
ECHDC1-206ENST00000417628 WFDC13Q8IUB5 93 aa3.12□□□□□ -1.91
ECHDC1-206ENST00000417628 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
ECHDC1-206ENST00000417628 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
ECHDC1-206ENST00000417628 MMP24-AS1A0A0U1RRL7 71 aa3.11□□□□□ -1.91
ECHDC1-206ENST00000417628 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
ECHDC1-206ENST00000417628 IGKV3OR2-268A0A0C4DH90 116 aa3.1□□□□□ -1.91
ECHDC1-206ENST00000417628 M0R2T5 61 aa3.1□□□□□ -1.91
ECHDC1-206ENST00000417628 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
ECHDC1-206ENST00000417628 SPRR1AP35321 89 aa3.1□□□□□ -1.91
ECHDC1-206ENST00000417628 Q6ZRX8 168 aa3.1□□□□□ -1.91
ECHDC1-206ENST00000417628 SPACA4Q8TDM5 124 aa3.1□□□□□ -1.91
ECHDC1-206ENST00000417628 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
ECHDC1-206ENST00000417628 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
ECHDC1-206ENST00000417628 TLX1NBP0CAT3 122 aa3.07□□□□□ -1.92
ECHDC1-206ENST00000417628 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
ECHDC1-206ENST00000417628 CLPSL2Q6UWE3 100 aa3.06□□□□□ -1.92
ECHDC1-206ENST00000417628 PCOTHQ58A44 107 aa3.05□□□□□ -1.92
ECHDC1-206ENST00000417628 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
ECHDC1-206ENST00000417628 UNQ6190/PRO20217Q6UXQ8 127 aa3.04□□□□□ -1.92
ECHDC1-206ENST00000417628 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
ECHDC1-206ENST00000417628 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
ECHDC1-206ENST00000417628 KRTAP10-12P60413 245 aa3.03□□□□□ -1.92
ECHDC1-206ENST00000417628 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
ECHDC1-206ENST00000417628 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
ECHDC1-206ENST00000417628 SPRR1BP22528 89 aa3.02□□□□□ -1.93
ECHDC1-206ENST00000417628 KRTAP13-3Q3SY46 172 aa3.02□□□□□ -1.93
ECHDC1-206ENST00000417628 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
ECHDC1-206ENST00000417628 A0A1B0GVX0 72 aa3□□□□□ -1.93
ECHDC1-206ENST00000417628 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
ECHDC1-206ENST00000417628 C15orf56Q8N910 161 aa3□□□□□ -1.93
ECHDC1-206ENST00000417628 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
ECHDC1-206ENST00000417628 MRPL34Q9BQ48 92 aaKnown RBP2.99□□□□□ -1.93
ECHDC1-206ENST00000417628 DEFB116Q30KQ4 102 aa2.98□□□□□ -1.93
ECHDC1-206ENST00000417628 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
ECHDC1-206ENST00000417628 DEFB105AQ8NG35 78 aa2.97□□□□□ -1.93
ECHDC1-206ENST00000417628 Q96NJ1 140 aa2.97□□□□□ -1.93
ECHDC1-206ENST00000417628 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
ECHDC1-206ENST00000417628 COX6B2Q6YFQ2 88 aa2.95□□□□□ -1.94
ECHDC1-206ENST00000417628 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
ECHDC1-206ENST00000417628 A0A0G2JQZ4 141 aa2.94□□□□□ -1.94
ECHDC1-206ENST00000417628 H0YAA0 97 aa2.93□□□□□ -1.94
ECHDC1-206ENST00000417628 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
ECHDC1-206ENST00000417628 A0A096LNI7 61 aa2.92□□□□□ -1.94
ECHDC1-206ENST00000417628 KMT2DO14686 5537 aa2.91□□□□□ -1.94
ECHDC1-206ENST00000417628 A0A1B0GU33 70 aa2.91□□□□□ -1.94
ECHDC1-206ENST00000417628 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
ECHDC1-206ENST00000417628 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
ECHDC1-206ENST00000417628 SSBP3-AS1Q7Z2R9 100 aa2.89□□□□□ -1.95
ECHDC1-206ENST00000417628 H1FX-AS1Q4G0G2 97 aa2.86□□□□□ -1.95
ECHDC1-206ENST00000417628 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-206ENST00000417628 KRTAP10-5P60370 271 aa2.85□□□□□ -1.95
ECHDC1-206ENST00000417628 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
ECHDC1-206ENST00000417628 FLGP20930 4061 aaPredicted RBP2.84□□□□□ -1.95
ECHDC1-206ENST00000417628 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
ECHDC1-206ENST00000417628 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
ECHDC1-206ENST00000417628 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms