RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 KLKP1Q107X0 134 aa4.42□□□□□ -1.7
MDC1-202ENST00000416571 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
MDC1-202ENST00000416571 CXCL6P80162 114 aa4.41□□□□□ -1.7
MDC1-202ENST00000416571 GTF2H5Q6ZYL4 71 aa4.41□□□□□ -1.7
MDC1-202ENST00000416571 LCA10Q71F78 164 aa4.41□□□□□ -1.7
MDC1-202ENST00000416571 NAA38Q9BRA0 125 aaKnown RBP4.41□□□□□ -1.7
MDC1-202ENST00000416571 C1orf64Q8NEQ6 169 aa4.39□□□□□ -1.71
MDC1-202ENST00000416571 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
MDC1-202ENST00000416571 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
MDC1-202ENST00000416571 Q8N9L7 120 aa4.37□□□□□ -1.71
MDC1-202ENST00000416571 J3QR89 54 aa4.36□□□□□ -1.71
MDC1-202ENST00000416571 SPRR2EP22531 72 aa4.36□□□□□ -1.71
MDC1-202ENST00000416571 SPRR2BP35325 72 aa4.36□□□□□ -1.71
MDC1-202ENST00000416571 SPRR2AP35326 72 aa4.36□□□□□ -1.71
MDC1-202ENST00000416571 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
MDC1-202ENST00000416571 V9GYY9 64 aa4.36□□□□□ -1.71
MDC1-202ENST00000416571 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
MDC1-202ENST00000416571 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
MDC1-202ENST00000416571 H3BT86 120 aa4.3□□□□□ -1.72
MDC1-202ENST00000416571 TAX1BP3O14907 124 aa4.3□□□□□ -1.72
MDC1-202ENST00000416571 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
MDC1-202ENST00000416571 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
MDC1-202ENST00000416571 K7EP34 96 aa4.26□□□□□ -1.73
MDC1-202ENST00000416571 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
MDC1-202ENST00000416571 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
MDC1-202ENST00000416571 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
MDC1-202ENST00000416571 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
MDC1-202ENST00000416571 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
MDC1-202ENST00000416571 UBL5Q9BZL1 73 aa4.24□□□□□ -1.73
MDC1-202ENST00000416571 SPRR2DP22532 72 aa4.23□□□□□ -1.73
MDC1-202ENST00000416571 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
MDC1-202ENST00000416571 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
MDC1-202ENST00000416571 A8MUN3 132 aa4.22□□□□□ -1.73
MDC1-202ENST00000416571 A0A087WVE0 104 aa4.21□□□□□ -1.74
MDC1-202ENST00000416571 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
MDC1-202ENST00000416571 SPCS1Q9Y6A9 102 aa4.2□□□□□ -1.74
MDC1-202ENST00000416571 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
MDC1-202ENST00000416571 F8W1H4 67 aa4.19□□□□□ -1.74
MDC1-202ENST00000416571 H0YAA0 97 aa4.19□□□□□ -1.74
MDC1-202ENST00000416571 NDUFC1O43677 76 aa4.19□□□□□ -1.74
MDC1-202ENST00000416571 MT-ATP8P03928 68 aa4.19□□□□□ -1.74
MDC1-202ENST00000416571 MT1XP80297 61 aa4.19□□□□□ -1.74
MDC1-202ENST00000416571 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
MDC1-202ENST00000416571 CYP4F30PQ9H0H9 118 aa4.19□□□□□ -1.74
MDC1-202ENST00000416571 A0A1W2PPM0 123 aa4.18□□□□□ -1.74
MDC1-202ENST00000416571 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
MDC1-202ENST00000416571 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
MDC1-202ENST00000416571 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
MDC1-202ENST00000416571 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
MDC1-202ENST00000416571 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
MDC1-202ENST00000416571 TRAV22A0A0B4J277 110 aa4.13□□□□□ -1.75
MDC1-202ENST00000416571 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
MDC1-202ENST00000416571 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
MDC1-202ENST00000416571 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
MDC1-202ENST00000416571 ACYP1P07311 99 aa4.1□□□□□ -1.75
MDC1-202ENST00000416571 ETDBQ3ZM63 59 aa4.1□□□□□ -1.75
MDC1-202ENST00000416571 R4GN34 69 aa4.1□□□□□ -1.75
MDC1-202ENST00000416571 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
MDC1-202ENST00000416571 UQCRQO14949 82 aa4.07□□□□□ -1.76
MDC1-202ENST00000416571 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
MDC1-202ENST00000416571 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
MDC1-202ENST00000416571 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
MDC1-202ENST00000416571 M0QZ58 72 aa4.05□□□□□ -1.76
MDC1-202ENST00000416571 TMEM258P61165 79 aa4.05□□□□□ -1.76
MDC1-202ENST00000416571 C20orf197Q8N268 126 aa4.05□□□□□ -1.76
MDC1-202ENST00000416571 PRO0461Q9UI25 63 aa4.04□□□□□ -1.76
MDC1-202ENST00000416571 ATOX1O00244 68 aa4.03□□□□□ -1.76
MDC1-202ENST00000416571 H0Y9P7 68 aa4.02□□□□□ -1.77
MDC1-202ENST00000416571 LINC01554Q52M75 96 aa4.02□□□□□ -1.77
MDC1-202ENST00000416571 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
MDC1-202ENST00000416571 P0C880 135 aa4□□□□□ -1.77
MDC1-202ENST00000416571 COX7CP15954 63 aa4□□□□□ -1.77
MDC1-202ENST00000416571 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
MDC1-202ENST00000416571 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
MDC1-202ENST00000416571 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
MDC1-202ENST00000416571 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
MDC1-202ENST00000416571 HIST1H4AP62805 103 aaKnown RBP3.95□□□□□ -1.78
MDC1-202ENST00000416571 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
MDC1-202ENST00000416571 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
MDC1-202ENST00000416571 LINC00208Q96KT6 92 aa3.94□□□□□ -1.78
MDC1-202ENST00000416571 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
MDC1-202ENST00000416571 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
MDC1-202ENST00000416571 MP68P56378 58 aa3.9□□□□□ -1.79
MDC1-202ENST00000416571 ATP5EP2Q5VTU8 51 aa3.9□□□□□ -1.79
MDC1-202ENST00000416571 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
MDC1-202ENST00000416571 SERP2Q8N6R1 65 aa3.88□□□□□ -1.79
MDC1-202ENST00000416571 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
MDC1-202ENST00000416571 LINC00643Q86TS7 51 aa3.85□□□□□ -1.79
MDC1-202ENST00000416571 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
MDC1-202ENST00000416571 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
MDC1-202ENST00000416571 DMAC1Q96GE9 116 aa3.83□□□□□ -1.8
MDC1-202ENST00000416571 ATP5EP56381 51 aaPredicted RBP3.81□□□□□ -1.8
MDC1-202ENST00000416571 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
MDC1-202ENST00000416571 KRTAP5-3Q6L8H2 238 aa3.8□□□□□ -1.8
MDC1-202ENST00000416571 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
MDC1-202ENST00000416571 MT4P47944 62 aa3.78□□□□□ -1.8
MDC1-202ENST00000416571 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
MDC1-202ENST00000416571 H3BPC8 53 aa3.77□□□□□ -1.81
MDC1-202ENST00000416571 TRAV7A0A075B6U4 112 aa3.76□□□□□ -1.81
MDC1-202ENST00000416571 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms