RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 Q9BRP9 147 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 PRR4Q16378 134 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 C1orf137Q5JT78 98 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 SPINK6Q6UWN8 80 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 DHRS4-AS1Q9P1J3 65 aa2.93□□□□□ -1.94
LINC00550-201ENST00000629293 LINC00474Q9P2X8 69 aa2.92□□□□□ -1.94
LINC00550-201ENST00000629293 LOC107984640A0A0U1RRK4 108 aa2.92□□□□□ -1.94
LINC00550-201ENST00000629293 SMIM20Q8N5G0 67 aa2.92□□□□□ -1.94
LINC00550-201ENST00000629293 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
LINC00550-201ENST00000629293 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
LINC00550-201ENST00000629293 TMEM258P61165 79 aa2.91□□□□□ -1.94
LINC00550-201ENST00000629293 PHF5AQ7RTV0 110 aaKnown RBP2.91□□□□□ -1.94
LINC00550-201ENST00000629293 PSORS1C2Q9UIG4 136 aa2.91□□□□□ -1.94
LINC00550-201ENST00000629293 TRAV7A0A075B6U4 112 aa2.91□□□□□ -1.94
LINC00550-201ENST00000629293 MRPL55Q7Z7F7 128 aaKnown RBP2.91□□□□□ -1.94
LINC00550-201ENST00000629293 Q8NBF4 154 aa2.91□□□□□ -1.94
LINC00550-201ENST00000629293 ETDCA0A1B0GVM5 59 aa2.9□□□□□ -1.94
LINC00550-201ENST00000629293 A0A1B0GW54 56 aa2.9□□□□□ -1.94
LINC00550-201ENST00000629293 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
LINC00550-201ENST00000629293 FAM19A5Q7Z5A7 132 aaPredicted RBP2.9□□□□□ -1.95
LINC00550-201ENST00000629293 A0A1W2PNM2 257 aa2.9□□□□□ -1.95
LINC00550-201ENST00000629293 ERC2-IT1O76042 136 aa2.9□□□□□ -1.95
LINC00550-201ENST00000629293 ST20-AS1Q8NBB2 130 aa2.9□□□□□ -1.95
LINC00550-201ENST00000629293 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
LINC00550-201ENST00000629293 UBE2BP63146 152 aa2.89□□□□□ -1.95
LINC00550-201ENST00000629293 DEFB105AQ8NG35 78 aa2.89□□□□□ -1.95
LINC00550-201ENST00000629293 SPRR4Q96PI1 79 aa2.89□□□□□ -1.95
LINC00550-201ENST00000629293 PKIGQ9Y2B9 76 aa2.89□□□□□ -1.95
LINC00550-201ENST00000629293 J3KT08 172 aa2.89□□□□□ -1.95
LINC00550-201ENST00000629293 KLKP1Q107X0 134 aa2.89□□□□□ -1.95
LINC00550-201ENST00000629293 NREPQ16612 68 aa2.88□□□□□ -1.95
LINC00550-201ENST00000629293 C20orf197Q8N268 126 aa2.88□□□□□ -1.95
LINC00550-201ENST00000629293 H7BZZ5 65 aa2.87□□□□□ -1.95
LINC00550-201ENST00000629293 IGLV8-61A0A075B6I0 122 aa2.87□□□□□ -1.95
LINC00550-201ENST00000629293 IGLV7-43P04211 117 aa2.87□□□□□ -1.95
LINC00550-201ENST00000629293 Q8N9L7 120 aa2.87□□□□□ -1.95
LINC00550-201ENST00000629293 BPY2O14599 106 aa2.87□□□□□ -1.95
LINC00550-201ENST00000629293 KRTAP11-1Q8IUC1 163 aa2.86□□□□□ -1.95
LINC00550-201ENST00000629293 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
LINC00550-201ENST00000629293 H0Y9J4 135 aa2.86□□□□□ -1.95
LINC00550-201ENST00000629293 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 FAM236DA0A1B0GTK5 79 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 FAM236CP0DP71 79 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 SPRR1BP22528 89 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 DSCR10P59022 87 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 PRLHP81277 87 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 LCE1AQ5T7P2 110 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 IGFL1Q6UW32 110 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 RETNLBQ9BQ08 111 aa2.85□□□□□ -1.95
LINC00550-201ENST00000629293 NDUFC1O43677 76 aa2.84□□□□□ -1.95
LINC00550-201ENST00000629293 SNURFQ9Y675 71 aa2.84□□□□□ -1.95
LINC00550-201ENST00000629293 TMEM254Q8TBM7 123 aa2.84□□□□□ -1.96
LINC00550-201ENST00000629293 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.96
LINC00550-201ENST00000629293 F8WEM9 126 aa2.83□□□□□ -1.96
LINC00550-201ENST00000629293 KRTAP13-1Q8IUC0 172 aa2.83□□□□□ -1.96
LINC00550-201ENST00000629293 K7EQZ3 153 aa2.83□□□□□ -1.96
LINC00550-201ENST00000629293 A0A0G2JQZ4 141 aa2.82□□□□□ -1.96
LINC00550-201ENST00000629293 KRTAP1-4P0C5Y4 121 aa2.82□□□□□ -1.96
LINC00550-201ENST00000629293 HIGD2AQ9BW72 106 aa2.82□□□□□ -1.96
LINC00550-201ENST00000629293 SERP1Q9Y6X1 66 aa2.82□□□□□ -1.96
LINC00550-201ENST00000629293 ATP5EP56381 51 aaPredicted RBP2.82□□□□□ -1.96
LINC00550-201ENST00000629293 TYMSOSQ8TAI1 123 aa2.81□□□□□ -1.96
LINC00550-201ENST00000629293 UBE2AP49459 152 aa2.81□□□□□ -1.96
LINC00550-201ENST00000629293 Q5XG85 94 aa2.81□□□□□ -1.96
LINC00550-201ENST00000629293 KRTAP16-1A8MUX0 517 aa2.81□□□□□ -1.96
LINC00550-201ENST00000629293 A0A087WSZ3 146 aa2.8□□□□□ -1.96
LINC00550-201ENST00000629293 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
LINC00550-201ENST00000629293 ZNF861PO60384 105 aa2.8□□□□□ -1.96
LINC00550-201ENST00000629293 ZCCHC13Q8WW36 166 aaKnown RBP2.8□□□□□ -1.96
LINC00550-201ENST00000629293 IGKV2D-30A0A075B6S6 120 aa2.8□□□□□ -1.96
LINC00550-201ENST00000629293 IGLV7-46A0A075B6I9 117 aa2.8□□□□□ -1.96
LINC00550-201ENST00000629293 LINC00472Q9H8W2 130 aa2.79□□□□□ -1.96
LINC00550-201ENST00000629293 LINC00483Q53H64 154 aa2.78□□□□□ -1.96
LINC00550-201ENST00000629293 DEFB116Q30KQ4 102 aa2.78□□□□□ -1.96
LINC00550-201ENST00000629293 A8MWP4 228 aa2.77□□□□□ -1.97
LINC00550-201ENST00000629293 C5orf47Q569G3 176 aa2.77□□□□□ -1.97
LINC00550-201ENST00000629293 FP248Q71RG6 208 aaPredicted RBP2.77□□□□□ -1.97
LINC00550-201ENST00000629293 PRR15Q8IV56 129 aa2.77□□□□□ -1.97
LINC00550-201ENST00000629293 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
LINC00550-201ENST00000629293 C4orf26Q17RF5 130 aa2.77□□□□□ -1.97
LINC00550-201ENST00000629293 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
LINC00550-201ENST00000629293 Q96NJ1 140 aa2.76□□□□□ -1.97
LINC00550-201ENST00000629293 WFDC13Q8IUB5 93 aa2.75□□□□□ -1.97
LINC00550-201ENST00000629293 ASB16-AS1Q495Z4 193 aa2.75□□□□□ -1.97
LINC00550-201ENST00000629293 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
LINC00550-201ENST00000629293 MMP24-AS1A0A0U1RRL7 71 aa2.75□□□□□ -1.97
LINC00550-201ENST00000629293 FAM229BQ4G0N7 80 aa2.75□□□□□ -1.97
LINC00550-201ENST00000629293 CASC2Q6XLA1 102 aa2.75□□□□□ -1.97
LINC00550-201ENST00000629293 HRCT1Q6UXD1 115 aa2.74□□□□□ -1.97
LINC00550-201ENST00000629293 ZNF706Q9Y5V0 76 aaPredicted RBP2.74□□□□□ -1.97
LINC00550-201ENST00000629293 CYP4F30PQ9H0H9 118 aa2.74□□□□□ -1.97
LINC00550-201ENST00000629293 hDV103S1A0JD37 113 aa2.74□□□□□ -1.97
LINC00550-201ENST00000629293 H3BPC8 53 aa2.74□□□□□ -1.97
LINC00550-201ENST00000629293 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
LINC00550-201ENST00000629293 TRAV22A0A0B4J277 110 aa2.73□□□□□ -1.97
LINC00550-201ENST00000629293 MOBPQ13875 183 aa2.73□□□□□ -1.97
LINC00550-201ENST00000629293 NDUFB1O75438 58 aa2.72□□□□□ -1.97
LINC00550-201ENST00000629293 MP68P56378 58 aa2.72□□□□□ -1.97
LINC00550-201ENST00000629293 H0Y9P7 68 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms