RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
UBE3D-208ENST00000626828 A0A1B0GVX0 72 aa8.76□□□□□ -1.01
UBE3D-208ENST00000626828 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
UBE3D-208ENST00000626828 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
UBE3D-208ENST00000626828 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
UBE3D-208ENST00000626828 COL5A1-AS1Q5SY13 56 aa8.75□□□□□ -1.01
UBE3D-208ENST00000626828 NDUFB1O75438 58 aa8.74□□□□□ -1.01
UBE3D-208ENST00000626828 SPCS1Q9Y6A9 102 aa8.73□□□□□ -1.01
UBE3D-208ENST00000626828 NREPQ16612 68 aa8.71□□□□□ -1.02
UBE3D-208ENST00000626828 MTURNQ8N3F0 131 aa8.71□□□□□ -1.02
UBE3D-208ENST00000626828 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
UBE3D-208ENST00000626828 MT1HP80294 61 aa8.67□□□□□ -1.02
UBE3D-208ENST00000626828 A8MWP4 228 aa8.66□□□□□ -1.02
UBE3D-208ENST00000626828 IGKV3D-7A0A0C4DH55 119 aa8.62□□□□□ -1.03
UBE3D-208ENST00000626828 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
UBE3D-208ENST00000626828 C8orf17Q9NRJ1 99 aa8.62□□□□□ -1.03
UBE3D-208ENST00000626828 PCP4L1A6NKN8 68 aa8.61□□□□□ -1.03
UBE3D-208ENST00000626828 PRR15Q8IV56 129 aa8.61□□□□□ -1.03
UBE3D-208ENST00000626828 K7EP34 96 aa8.6□□□□□ -1.03
UBE3D-208ENST00000626828 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
UBE3D-208ENST00000626828 M0R2T5 61 aa8.58□□□□□ -1.04
UBE3D-208ENST00000626828 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
UBE3D-208ENST00000626828 KRTAP9-2Q9BYQ4 174 aa8.57□□□□□ -1.04
UBE3D-208ENST00000626828 FLGP20930 4061 aaPredicted RBP8.56□□□□□ -1.04
UBE3D-208ENST00000626828 GTF2H5Q6ZYL4 71 aa8.56□□□□□ -1.04
UBE3D-208ENST00000626828 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
UBE3D-208ENST00000626828 Q6ZVQ6 151 aa8.55□□□□□ -1.04
UBE3D-208ENST00000626828 BPY2O14599 106 aa8.54□□□□□ -1.04
UBE3D-208ENST00000626828 F8W1H4 67 aa8.5□□□□□ -1.05
UBE3D-208ENST00000626828 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
UBE3D-208ENST00000626828 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
UBE3D-208ENST00000626828 K7EQZ3 153 aa8.49□□□□□ -1.05
UBE3D-208ENST00000626828 KRTAP10-6P60371 365 aaPredicted RBP8.49□□□□□ -1.05
UBE3D-208ENST00000626828 MRPL34Q9BQ48 92 aaKnown RBP8.49□□□□□ -1.05
UBE3D-208ENST00000626828 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
UBE3D-208ENST00000626828 hDV103S1A0JD37 113 aa8.48□□□□□ -1.05
UBE3D-208ENST00000626828 HRES1P13985 223 aa8.48□□□□□ -1.05
UBE3D-208ENST00000626828 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
UBE3D-208ENST00000626828 SPINK7P58062 85 aa8.47□□□□□ -1.05
UBE3D-208ENST00000626828 FAM236DA0A1B0GTK5 79 aa8.46□□□□□ -1.06
UBE3D-208ENST00000626828 FAM236CP0DP71 79 aa8.46□□□□□ -1.06
UBE3D-208ENST00000626828 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.06
UBE3D-208ENST00000626828 UBL5Q9BZL1 73 aa8.46□□□□□ -1.06
UBE3D-208ENST00000626828 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
UBE3D-208ENST00000626828 LINC00846Q9NV44 126 aa8.45□□□□□ -1.06
UBE3D-208ENST00000626828 NDUFS5O43920 106 aa8.41□□□□□ -1.06
UBE3D-208ENST00000626828 ETDBQ3ZM63 59 aa8.41□□□□□ -1.06
UBE3D-208ENST00000626828 Q8N9L7 120 aa8.39□□□□□ -1.07
UBE3D-208ENST00000626828 CASC2Q6XLA1 102 aa8.38□□□□□ -1.07
UBE3D-208ENST00000626828 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
UBE3D-208ENST00000626828 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
UBE3D-208ENST00000626828 CXCL6P80162 114 aa8.29□□□□□ -1.08
UBE3D-208ENST00000626828 Q5W150 140 aa8.29□□□□□ -1.08
UBE3D-208ENST00000626828 ACYP1P07311 99 aa8.26□□□□□ -1.09
UBE3D-208ENST00000626828 IGKV2D-30A0A075B6S6 120 aa8.24□□□□□ -1.09
UBE3D-208ENST00000626828 IGKV2-30P06310 120 aa8.24□□□□□ -1.09
UBE3D-208ENST00000626828 KRTAP9-8Q9BYQ0 159 aa8.24□□□□□ -1.09
UBE3D-208ENST00000626828 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
UBE3D-208ENST00000626828 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
UBE3D-208ENST00000626828 FAM240AA0A1B0GVK7 77 aa8.18□□□□□ -1.1
UBE3D-208ENST00000626828 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
UBE3D-208ENST00000626828 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
UBE3D-208ENST00000626828 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
UBE3D-208ENST00000626828 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
UBE3D-208ENST00000626828 A0A1B0GV90 55 aa8.13□□□□□ -1.11
UBE3D-208ENST00000626828 MT2AP02795 61 aa8.13□□□□□ -1.11
UBE3D-208ENST00000626828 ATP5EP2Q5VTU8 51 aa8.11□□□□□ -1.11
UBE3D-208ENST00000626828 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
UBE3D-208ENST00000626828 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
UBE3D-208ENST00000626828 MT1FP04733 61 aa8.05□□□□□ -1.12
UBE3D-208ENST00000626828 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
UBE3D-208ENST00000626828 LINC00643Q86TS7 51 aa8.05□□□□□ -1.12
UBE3D-208ENST00000626828 KRTAP9-3Q9BYQ3 159 aa7.99□□□□□ -1.13
UBE3D-208ENST00000626828 C1orf64Q8NEQ6 169 aa7.98□□□□□ -1.13
UBE3D-208ENST00000626828 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
UBE3D-208ENST00000626828 J3QR89 54 aa7.97□□□□□ -1.13
UBE3D-208ENST00000626828 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
UBE3D-208ENST00000626828 UQCRQO14949 82 aa7.96□□□□□ -1.14
UBE3D-208ENST00000626828 KRTAP3-1Q9BYR8 98 aa7.96□□□□□ -1.14
UBE3D-208ENST00000626828 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
UBE3D-208ENST00000626828 A0A087WVE0 104 aa7.92□□□□□ -1.14
UBE3D-208ENST00000626828 USH2AO75445 5202 aa7.9□□□□□ -1.14
UBE3D-208ENST00000626828 ATOX1O00244 68 aa7.9□□□□□ -1.14
UBE3D-208ENST00000626828 LCE2BO14633 110 aa7.9□□□□□ -1.14
UBE3D-208ENST00000626828 S4R3F8 94 aa7.88□□□□□ -1.15
UBE3D-208ENST00000626828 H0Y9P7 68 aa7.87□□□□□ -1.15
UBE3D-208ENST00000626828 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
UBE3D-208ENST00000626828 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
UBE3D-208ENST00000626828 LCA10Q71F78 164 aa7.81□□□□□ -1.16
UBE3D-208ENST00000626828 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
UBE3D-208ENST00000626828 SSPOA2VEC9 5147 aa7.8□□□□□ -1.16
UBE3D-208ENST00000626828 MP68P56378 58 aa7.78□□□□□ -1.16
UBE3D-208ENST00000626828 LINC00208Q96KT6 92 aa7.78□□□□□ -1.16
UBE3D-208ENST00000626828 SCGB1A1P11684 91 aa7.74□□□□□ -1.17
UBE3D-208ENST00000626828 FAM236AA0A1B0GUQ0 79 aa7.72□□□□□ -1.17
UBE3D-208ENST00000626828 FAM236BA0A1B0GV22 79 aa7.72□□□□□ -1.17
UBE3D-208ENST00000626828 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
UBE3D-208ENST00000626828 K7ERU9 68 aa7.71□□□□□ -1.18
UBE3D-208ENST00000626828 H3BPC8 53 aa7.7□□□□□ -1.18
UBE3D-208ENST00000626828 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms