RNA–Protein interactions for RNA: ENST00000623687.1

DUX4L28-201, Transcript of double homeobox 4 like 28, humanhuman

BASIC

Gene DUX4L28, Length 678 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4L28-201ENST00000623687 LOC105371267A0A1B0GV96 52 aa13.61□□□□□ -0.23
DUX4L28-201ENST00000623687 TRBV20-1A0A075B6N2 111 aa13.6□□□□□ -0.23
DUX4L28-201ENST00000623687 Q6ZQT0 140 aa13.6□□□□□ -0.23
DUX4L28-201ENST00000623687 C8orf87E5RJ46 101 aa13.58□□□□□ -0.24
DUX4L28-201ENST00000623687 BATFQ16520 125 aa13.58□□□□□ -0.24
DUX4L28-201ENST00000623687 A0A1B0GW54 56 aa13.56□□□□□ -0.24
DUX4L28-201ENST00000623687 PDE6GP18545 87 aa13.56□□□□□ -0.24
DUX4L28-201ENST00000623687 CRCT1Q9UGL9 99 aa13.56□□□□□ -0.24
DUX4L28-201ENST00000623687 LOC110117498A0A087WWA1 95 aa13.54□□□□□ -0.24
DUX4L28-201ENST00000623687 J3KT08 172 aa13.54□□□□□ -0.24
DUX4L28-201ENST00000623687 FSIP2Q5CZC0 6907 aa13.51□□□□□ -0.25
DUX4L28-201ENST00000623687 HRES1P13985 223 aa13.49□□□□□ -0.25
DUX4L28-201ENST00000623687 C14orf132Q9NPU4 83 aa13.49□□□□□ -0.25
DUX4L28-201ENST00000623687 C9orf118A6NHY6 69 aa13.47□□□□□ -0.25
DUX4L28-201ENST00000623687 MPLKIPQ8TAP9 179 aa13.46□□□□□ -0.25
DUX4L28-201ENST00000623687 FAM236DA0A1B0GTK5 79 aa13.42□□□□□ -0.26
DUX4L28-201ENST00000623687 TAX1BP3O14907 124 aa13.42□□□□□ -0.26
DUX4L28-201ENST00000623687 NDUFB1O75438 58 aa13.42□□□□□ -0.26
DUX4L28-201ENST00000623687 FAM236CP0DP71 79 aa13.42□□□□□ -0.26
DUX4L28-201ENST00000623687 A8MWP4 228 aa13.41□□□□□ -0.26
DUX4L28-201ENST00000623687 A0A1W2PPM0 123 aa13.4□□□□□ -0.26
DUX4L28-201ENST00000623687 ZCCHC13Q8WW36 166 aaKnown RBP13.4□□□□□ -0.26
DUX4L28-201ENST00000623687 H3BT86 120 aa13.39□□□□□ -0.27
DUX4L28-201ENST00000623687 C8orf17Q9NRJ1 99 aa13.38□□□□□ -0.27
DUX4L28-201ENST00000623687 IGKV3D-7A0A0C4DH55 119 aa13.37□□□□□ -0.27
DUX4L28-201ENST00000623687 Q8N9P0 234 aaPredicted RBP13.37□□□□□ -0.27
DUX4L28-201ENST00000623687 KRTAP9-8Q9BYQ0 159 aa13.37□□□□□ -0.27
DUX4L28-201ENST00000623687 RBM12B-AS1Q9P1G2 102 aa13.37□□□□□ -0.27
DUX4L28-201ENST00000623687 MTURNQ8N3F0 131 aa13.31□□□□□ -0.28
DUX4L28-201ENST00000623687 NREPQ16612 68 aa13.3□□□□□ -0.28
DUX4L28-201ENST00000623687 SPINK7P58062 85 aa13.28□□□□□ -0.28
DUX4L28-201ENST00000623687 PRR15Q8IV56 129 aa13.28□□□□□ -0.28
DUX4L28-201ENST00000623687 Q6ZVQ6 151 aa13.26□□□□□ -0.29
DUX4L28-201ENST00000623687 SPCS1Q9Y6A9 102 aa13.22□□□□□ -0.29
DUX4L28-201ENST00000623687 MMP24-AS1A0A0U1RRL7 71 aa13.2□□□□□ -0.3
DUX4L28-201ENST00000623687 MT2AP02795 61 aa13.19□□□□□ -0.3
DUX4L28-201ENST00000623687 COL5A1-AS1Q5SY13 56 aa13.18□□□□□ -0.3
DUX4L28-201ENST00000623687 K7EQZ3 153 aa13.16□□□□□ -0.3
DUX4L28-201ENST00000623687 TMEM254Q8TBM7 123 aa13.16□□□□□ -0.3
DUX4L28-201ENST00000623687 MRPL34Q9BQ48 92 aaKnown RBP13.15□□□□□ -0.3
DUX4L28-201ENST00000623687 WFDC13Q8IUB5 93 aa13.11□□□□□ -0.31
DUX4L28-201ENST00000623687 MT1FP04733 61 aa13.09□□□□□ -0.31
DUX4L28-201ENST00000623687 hDV103S1A0JD37 113 aa13.08□□□□□ -0.32
DUX4L28-201ENST00000623687 SMCPP49901 116 aaPredicted RBP13.08□□□□□ -0.32
DUX4L28-201ENST00000623687 BPY2O14599 106 aa13.07□□□□□ -0.32
DUX4L28-201ENST00000623687 USH2AO75445 5202 aa13.03□□□□□ -0.32
DUX4L28-201ENST00000623687 K7EP34 96 aa13.02□□□□□ -0.33
DUX4L28-201ENST00000623687 NDUFS5O43920 106 aa13.01□□□□□ -0.33
DUX4L28-201ENST00000623687 PRO0461Q9UI25 63 aa13□□□□□ -0.33
DUX4L28-201ENST00000623687 Q8N9L7 120 aa12.98□□□□□ -0.33
DUX4L28-201ENST00000623687 KRTAP10-10P60014 251 aa12.97□□□□□ -0.33
DUX4L28-201ENST00000623687 KRTAP9-3Q9BYQ3 159 aa12.95□□□□□ -0.34
DUX4L28-201ENST00000623687 GTF2H5Q6ZYL4 71 aa12.92□□□□□ -0.34
DUX4L28-201ENST00000623687 LCE2BO14633 110 aa12.91□□□□□ -0.34
DUX4L28-201ENST00000623687 Q5W150 140 aa12.91□□□□□ -0.34
DUX4L28-201ENST00000623687 UBL5Q9BZL1 73 aa12.9□□□□□ -0.34
DUX4L28-201ENST00000623687 SSPOA2VEC9 5147 aa12.9□□□□□ -0.34
DUX4L28-201ENST00000623687 CASC2Q6XLA1 102 aa12.89□□□□□ -0.35
DUX4L28-201ENST00000623687 LINC00846Q9NV44 126 aa12.87□□□□□ -0.35
DUX4L28-201ENST00000623687 IGKV2D-30A0A075B6S6 120 aa12.85□□□□□ -0.35
DUX4L28-201ENST00000623687 IGKV2-30P06310 120 aa12.85□□□□□ -0.35
DUX4L28-201ENST00000623687 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
DUX4L28-201ENST00000623687 HCG22E2RYF7 251 aa12.83□□□□□ -0.36
DUX4L28-201ENST00000623687 F8W1H4 67 aa12.82□□□□□ -0.36
DUX4L28-201ENST00000623687 C7orf65Q6ZTY9 151 aa12.81□□□□□ -0.36
DUX4L28-201ENST00000623687 H1FX-AS1Q4G0G2 97 aa12.8□□□□□ -0.36
DUX4L28-201ENST00000623687 CXCL6P80162 114 aa12.73□□□□□ -0.37
DUX4L28-201ENST00000623687 ETDBQ3ZM63 59 aa12.71□□□□□ -0.37
DUX4L28-201ENST00000623687 KRTAP19-1Q8IUB9 90 aa12.68□□□□□ -0.38
DUX4L28-201ENST00000623687 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.65□□□□□ -0.38
DUX4L28-201ENST00000623687 C4orf26Q17RF5 130 aa12.64□□□□□ -0.39
DUX4L28-201ENST00000623687 FCGBPQ9Y6R7 5405 aaPredicted RBP12.62□□□□□ -0.39
DUX4L28-201ENST00000623687 TP53AIP1Q9HCN2 124 aa12.53□□□□□ -0.4
DUX4L28-201ENST00000623687 ACYP1P07311 99 aa12.5□□□□□ -0.41
DUX4L28-201ENST00000623687 KRTAP3-1Q9BYR8 98 aa12.49□□□□□ -0.41
DUX4L28-201ENST00000623687 KRTAP9-7A8MTY7 169 aa12.48□□□□□ -0.41
DUX4L28-201ENST00000623687 FAM240AA0A1B0GVK7 77 aa12.43□□□□□ -0.42
DUX4L28-201ENST00000623687 KRTAP19-6Q3LI70 58 aa12.43□□□□□ -0.42
DUX4L28-201ENST00000623687 C5orf47Q569G3 176 aa12.39□□□□□ -0.43
DUX4L28-201ENST00000623687 C1orf64Q8NEQ6 169 aa12.39□□□□□ -0.43
DUX4L28-201ENST00000623687 ATP5EP2Q5VTU8 51 aa12.38□□□□□ -0.43
DUX4L28-201ENST00000623687 S4R3F8 94 aa12.35□□□□□ -0.43
DUX4L28-201ENST00000623687 LCA10Q71F78 164 aa12.29□□□□□ -0.44
DUX4L28-201ENST00000623687 CYP4F30PQ9H0H9 118 aa12.26□□□□□ -0.45
DUX4L28-201ENST00000623687 CSAG1Q6PB30 78 aa12.24□□□□□ -0.45
DUX4L28-201ENST00000623687 TRAV22A0A0B4J277 110 aa12.23□□□□□ -0.45
DUX4L28-201ENST00000623687 HIST1H4AP62805 103 aaKnown RBP12.22□□□□□ -0.45
DUX4L28-201ENST00000623687 FAM236AA0A1B0GUQ0 79 aa12.21□□□□□ -0.45
DUX4L28-201ENST00000623687 FAM236BA0A1B0GV22 79 aa12.21□□□□□ -0.45
DUX4L28-201ENST00000623687 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
DUX4L28-201ENST00000623687 LINC00643Q86TS7 51 aa12.18□□□□□ -0.46
DUX4L28-201ENST00000623687 A0A1B0GV90 55 aa12.14□□□□□ -0.47
DUX4L28-201ENST00000623687 UQCRQO14949 82 aa12.14□□□□□ -0.47
DUX4L28-201ENST00000623687 KRTAP3-3Q9BYR6 98 aa12.14□□□□□ -0.47
DUX4L28-201ENST00000623687 MACF1Q9UPN3 7388 aaKnown RBP12.14□□□□□ -0.47
DUX4L28-201ENST00000623687 A0A087WVE0 104 aa12.09□□□□□ -0.47
DUX4L28-201ENST00000623687 ATOX1O00244 68 aa12.09□□□□□ -0.47
DUX4L28-201ENST00000623687 H0Y9P7 68 aa12.05□□□□□ -0.48
DUX4L28-201ENST00000623687 SPRR2GQ9BYE4 73 aa12.04□□□□□ -0.48
DUX4L28-201ENST00000623687 MT1BP07438 61 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms