RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 C21orf62-AS1Q17RA5 79 aa12.01□□□□□ -0.49
ATXN3-252ENST00000620536 MPLKIPQ8TAP9 179 aa12.01□□□□□ -0.49
ATXN3-252ENST00000620536 C9JAW5 83 aa12□□□□□ -0.49
ATXN3-252ENST00000620536 BAALC-AS2P0C853 105 aa12□□□□□ -0.49
ATXN3-252ENST00000620536 TMA7Q9Y2S6 64 aaKnown RBP12□□□□□ -0.49
ATXN3-252ENST00000620536 J3KT08 172 aa11.99□□□□□ -0.49
ATXN3-252ENST00000620536 Q6ZQT0 140 aa11.93□□□□□ -0.5
ATXN3-252ENST00000620536 MT2AP02795 61 aa11.92□□□□□ -0.5
ATXN3-252ENST00000620536 MTURNQ8N3F0 131 aa11.92□□□□□ -0.5
ATXN3-252ENST00000620536 ZCCHC13Q8WW36 166 aaKnown RBP11.92□□□□□ -0.5
ATXN3-252ENST00000620536 NDUFB1O75438 58 aa11.91□□□□□ -0.5
ATXN3-252ENST00000620536 ATXN8Q156A1 80 aa11.88□□□□□ -0.51
ATXN3-252ENST00000620536 JMJD7-PLA2G4BH0Y9G9 81 aa11.86□□□□□ -0.51
ATXN3-252ENST00000620536 SPINK7P58062 85 aa11.85□□□□□ -0.51
ATXN3-252ENST00000620536 M0R143 59 aa11.84□□□□□ -0.51
ATXN3-252ENST00000620536 USH2AO75445 5202 aa11.84□□□□□ -0.51
ATXN3-252ENST00000620536 A0A1B0GW54 56 aa11.83□□□□□ -0.52
ATXN3-252ENST00000620536 MT1FP04733 61 aa11.82□□□□□ -0.52
ATXN3-252ENST00000620536 KRTAP10-10P60014 251 aa11.82□□□□□ -0.52
ATXN3-252ENST00000620536 Q8N9P0 234 aaPredicted RBP11.82□□□□□ -0.52
ATXN3-252ENST00000620536 LOC110117498A0A087WWA1 95 aa11.81□□□□□ -0.52
ATXN3-252ENST00000620536 LYRM7Q5U5X0 104 aa11.81□□□□□ -0.52
ATXN3-252ENST00000620536 NAA38Q9BRA0 125 aaKnown RBP11.81□□□□□ -0.52
ATXN3-252ENST00000620536 A8MWP4 228 aa11.8□□□□□ -0.52
ATXN3-252ENST00000620536 PDE6GP18545 87 aa11.79□□□□□ -0.52
ATXN3-252ENST00000620536 C8orf17Q9NRJ1 99 aa11.79□□□□□ -0.52
ATXN3-252ENST00000620536 SSPOA2VEC9 5147 aa11.76□□□□□ -0.53
ATXN3-252ENST00000620536 IGKV3D-7A0A0C4DH55 119 aa11.74□□□□□ -0.53
ATXN3-252ENST00000620536 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-252ENST00000620536 C14orf132Q9NPU4 83 aa11.74□□□□□ -0.53
ATXN3-252ENST00000620536 KRTAP9-3Q9BYQ3 159 aa11.73□□□□□ -0.53
ATXN3-252ENST00000620536 LCE2BO14633 110 aa11.71□□□□□ -0.53
ATXN3-252ENST00000620536 Q6ZVQ6 151 aa11.71□□□□□ -0.53
ATXN3-252ENST00000620536 NREPQ16612 68 aa11.69□□□□□ -0.54
ATXN3-252ENST00000620536 WFDC13Q8IUB5 93 aa11.69□□□□□ -0.54
ATXN3-252ENST00000620536 PRR15Q8IV56 129 aa11.67□□□□□ -0.54
ATXN3-252ENST00000620536 KRTAP9-7A8MTY7 169 aa11.65□□□□□ -0.54
ATXN3-252ENST00000620536 KRTAP19-1Q8IUB9 90 aa11.61□□□□□ -0.55
ATXN3-252ENST00000620536 TMEM254Q8TBM7 123 aa11.6□□□□□ -0.55
ATXN3-252ENST00000620536 MRPL34Q9BQ48 92 aaKnown RBP11.6□□□□□ -0.55
ATXN3-252ENST00000620536 SMIM6P0DI80 62 aa11.59□□□□□ -0.55
ATXN3-252ENST00000620536 MMP24-AS1A0A0U1RRL7 71 aa11.58□□□□□ -0.56
ATXN3-252ENST00000620536 BATFQ16520 125 aa11.57□□□□□ -0.56
ATXN3-252ENST00000620536 FCGBPQ9Y6R7 5405 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-252ENST00000620536 hDV103S1A0JD37 113 aa11.53□□□□□ -0.56
ATXN3-252ENST00000620536 NDUFS5O43920 106 aa11.53□□□□□ -0.56
ATXN3-252ENST00000620536 TSTD3H0UI37 97 aa11.52□□□□□ -0.57
ATXN3-252ENST00000620536 K7EQZ3 153 aa11.51□□□□□ -0.57
ATXN3-252ENST00000620536 H3BT86 120 aa11.49□□□□□ -0.57
ATXN3-252ENST00000620536 H1FX-AS1Q4G0G2 97 aa11.46□□□□□ -0.57
ATXN3-252ENST00000620536 LINC00846Q9NV44 126 aa11.46□□□□□ -0.57
ATXN3-252ENST00000620536 C9orf118A6NHY6 69 aa11.45□□□□□ -0.58
ATXN3-252ENST00000620536 BPY2O14599 106 aa11.45□□□□□ -0.58
ATXN3-252ENST00000620536 A0A1W2PPM0 123 aa11.41□□□□□ -0.58
ATXN3-252ENST00000620536 IGKV2D-30A0A075B6S6 120 aa11.4□□□□□ -0.58
ATXN3-252ENST00000620536 IGKV2-30P06310 120 aa11.4□□□□□ -0.58
ATXN3-252ENST00000620536 TAX1BP3O14907 124 aa11.38□□□□□ -0.59
ATXN3-252ENST00000620536 C7orf65Q6ZTY9 151 aa11.36□□□□□ -0.59
ATXN3-252ENST00000620536 KRTAP19-6Q3LI70 58 aa11.35□□□□□ -0.59
ATXN3-252ENST00000620536 Q5W150 140 aa11.35□□□□□ -0.59
ATXN3-252ENST00000620536 CASC2Q6XLA1 102 aa11.33□□□□□ -0.6
ATXN3-252ENST00000620536 Q8N9L7 120 aa11.31□□□□□ -0.6
ATXN3-252ENST00000620536 HCG22E2RYF7 251 aa11.29□□□□□ -0.6
ATXN3-252ENST00000620536 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
ATXN3-252ENST00000620536 CXCL6P80162 114 aa11.23□□□□□ -0.61
ATXN3-252ENST00000620536 C4orf26Q17RF5 130 aa11.22□□□□□ -0.61
ATXN3-252ENST00000620536 MACF1Q9UPN3 7388 aaKnown RBP11.21□□□□□ -0.62
ATXN3-252ENST00000620536 LOC105371267A0A1B0GV96 52 aa11.17□□□□□ -0.62
ATXN3-252ENST00000620536 SMCPP49901 116 aaPredicted RBP11.17□□□□□ -0.62
ATXN3-252ENST00000620536 UBL5Q9BZL1 73 aa11.16□□□□□ -0.62
ATXN3-252ENST00000620536 SYNE2Q8WXH0 6885 aaKnown RBP11.14□□□□□ -0.63
ATXN3-252ENST00000620536 C5orf47Q569G3 176 aa11.08□□□□□ -0.64
ATXN3-252ENST00000620536 COL5A1-AS1Q5SY13 56 aa11.04□□□□□ -0.64
ATXN3-252ENST00000620536 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
ATXN3-252ENST00000620536 FAM236AA0A1B0GUQ0 79 aa11.02□□□□□ -0.65
ATXN3-252ENST00000620536 FAM236BA0A1B0GV22 79 aa11.02□□□□□ -0.65
ATXN3-252ENST00000620536 S4R3F8 94 aa11.02□□□□□ -0.65
ATXN3-252ENST00000620536 K7EP34 96 aa11□□□□□ -0.65
ATXN3-252ENST00000620536 KRTAP3-1Q9BYR8 98 aa11□□□□□ -0.65
ATXN3-252ENST00000620536 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
ATXN3-252ENST00000620536 CSAG1Q6PB30 78 aa10.97□□□□□ -0.65
ATXN3-252ENST00000620536 TP53AIP1Q9HCN2 124 aa10.96□□□□□ -0.65
ATXN3-252ENST00000620536 KRTAP6-3Q3LI67 103 aa10.92□□□□□ -0.66
ATXN3-252ENST00000620536 LCA10Q71F78 164 aa10.92□□□□□ -0.66
ATXN3-252ENST00000620536 GTF2H5Q6ZYL4 71 aa10.86□□□□□ -0.67
ATXN3-252ENST00000620536 Q5VV11 94 aa10.83□□□□□ -0.68
ATXN3-252ENST00000620536 F8W1H4 67 aa10.82□□□□□ -0.68
ATXN3-252ENST00000620536 A6NN06 94 aa10.8□□□□□ -0.68
ATXN3-252ENST00000620536 SPRR2GQ9BYE4 73 aa10.8□□□□□ -0.68
ATXN3-252ENST00000620536 MT1BP07438 61 aa10.79□□□□□ -0.68
ATXN3-252ENST00000620536 ETDBQ3ZM63 59 aa10.78□□□□□ -0.68
ATXN3-252ENST00000620536 KRTAP19-8Q3LI54 63 aa10.76□□□□□ -0.69
ATXN3-252ENST00000620536 CYP4F30PQ9H0H9 118 aa10.76□□□□□ -0.69
ATXN3-252ENST00000620536 KLKP1Q107X0 134 aa10.74□□□□□ -0.69
ATXN3-252ENST00000620536 TRAV22A0A0B4J277 110 aa10.68□□□□□ -0.7
ATXN3-252ENST00000620536 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
ATXN3-252ENST00000620536 A0A087WVE0 104 aa10.61□□□□□ -0.71
ATXN3-252ENST00000620536 ACYP1P07311 99 aa10.6□□□□□ -0.71
ATXN3-252ENST00000620536 KRTAP10-5P60370 271 aa10.6□□□□□ -0.71
ATXN3-252ENST00000620536 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms