RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 TMEM256-PLSCR3K7ERE1 68 aa7.58□□□□□ -1.2
HDDC2-210ENST00000609574 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
HDDC2-210ENST00000609574 S100A6P06703 90 aa7.56□□□□□ -1.2
HDDC2-210ENST00000609574 WFDC13Q8IUB5 93 aa7.55□□□□□ -1.2
HDDC2-210ENST00000609574 VPS25Q9BRG1 176 aa7.55□□□□□ -1.2
HDDC2-210ENST00000609574 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
HDDC2-210ENST00000609574 J3KT08 172 aa7.54□□□□□ -1.2
HDDC2-210ENST00000609574 NDUFB1O75438 58 aa7.53□□□□□ -1.2
HDDC2-210ENST00000609574 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
HDDC2-210ENST00000609574 PSMB2P49721 201 aa7.52□□□□□ -1.21
HDDC2-210ENST00000609574 C21orf62-AS1Q17RA5 79 aa7.52□□□□□ -1.21
HDDC2-210ENST00000609574 TRIAP1O43715 76 aa7.51□□□□□ -1.21
HDDC2-210ENST00000609574 COX6CP09669 75 aa7.51□□□□□ -1.21
HDDC2-210ENST00000609574 CEND1Q8N111 149 aa7.51□□□□□ -1.21
HDDC2-210ENST00000609574 DSCR8Q96T75 97 aa7.49□□□□□ -1.21
HDDC2-210ENST00000609574 NEBP20929 6669 aa7.48□□□□□ -1.21
HDDC2-210ENST00000609574 UBE2V1Q13404 147 aa7.48□□□□□ -1.21
HDDC2-210ENST00000609574 RBM3P98179 157 aaKnown RBP7.47□□□□□ -1.21
HDDC2-210ENST00000609574 SPATA45Q537H7 98 aa7.46□□□□□ -1.22
HDDC2-210ENST00000609574 PAM16Q9Y3D7 125 aa7.45□□□□□ -1.22
HDDC2-210ENST00000609574 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
HDDC2-210ENST00000609574 LOC105371267A0A1B0GV96 52 aa7.43□□□□□ -1.22
HDDC2-210ENST00000609574 C2orf91Q6ZV80 131 aa7.42□□□□□ -1.22
HDDC2-210ENST00000609574 IGKV3D-7A0A0C4DH55 119 aa7.41□□□□□ -1.22
HDDC2-210ENST00000609574 FXYD2P54710 66 aa7.41□□□□□ -1.22
HDDC2-210ENST00000609574 VAMP8Q9BV40 100 aa7.41□□□□□ -1.22
HDDC2-210ENST00000609574 C9JAW5 83 aa7.4□□□□□ -1.22
HDDC2-210ENST00000609574 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
HDDC2-210ENST00000609574 Q6ZQT0 140 aa7.38□□□□□ -1.23
HDDC2-210ENST00000609574 SCGB1C2P0DMR2 95 aa7.36□□□□□ -1.23
HDDC2-210ENST00000609574 Q6ZVQ6 151 aa7.36□□□□□ -1.23
HDDC2-210ENST00000609574 A6NN06 94 aa7.34□□□□□ -1.23
HDDC2-210ENST00000609574 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
HDDC2-210ENST00000609574 K7ERJ3 54 aa7.32□□□□□ -1.24
HDDC2-210ENST00000609574 BAALC-AS2P0C853 105 aa7.31□□□□□ -1.24
HDDC2-210ENST00000609574 HSD52Q0P140 79 aa7.31□□□□□ -1.24
HDDC2-210ENST00000609574 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
HDDC2-210ENST00000609574 A0A1B0GW54 56 aa7.3□□□□□ -1.24
HDDC2-210ENST00000609574 NDUFS5O43920 106 aa7.29□□□□□ -1.24
HDDC2-210ENST00000609574 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
HDDC2-210ENST00000609574 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
HDDC2-210ENST00000609574 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
HDDC2-210ENST00000609574 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
HDDC2-210ENST00000609574 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
HDDC2-210ENST00000609574 IGKV2D-30A0A075B6S6 120 aa7.25□□□□□ -1.25
HDDC2-210ENST00000609574 JMJD7-PLA2G4BH0Y9G9 81 aa7.25□□□□□ -1.25
HDDC2-210ENST00000609574 IGKV2-30P06310 120 aa7.25□□□□□ -1.25
HDDC2-210ENST00000609574 SMIM6P0DI80 62 aa7.24□□□□□ -1.25
HDDC2-210ENST00000609574 PDE6GP18545 87 aa7.24□□□□□ -1.25
HDDC2-210ENST00000609574 PYY3Q5JQD4 70 aa7.24□□□□□ -1.25
HDDC2-210ENST00000609574 Q5VV11 94 aa7.24□□□□□ -1.25
HDDC2-210ENST00000609574 NREPQ16612 68 aa7.23□□□□□ -1.25
HDDC2-210ENST00000609574 C7orf65Q6ZTY9 151 aa7.22□□□□□ -1.25
HDDC2-210ENST00000609574 hDV103S1A0JD37 113 aa7.21□□□□□ -1.26
HDDC2-210ENST00000609574 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
HDDC2-210ENST00000609574 MMP24-AS1A0A0U1RRL7 71 aa7.18□□□□□ -1.26
HDDC2-210ENST00000609574 ATXN8Q156A1 80 aa7.17□□□□□ -1.26
HDDC2-210ENST00000609574 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
HDDC2-210ENST00000609574 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
HDDC2-210ENST00000609574 MDN1Q9NU22 5596 aa7.12□□□□□ -1.27
HDDC2-210ENST00000609574 MT1BP07438 61 aa7.12□□□□□ -1.27
HDDC2-210ENST00000609574 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
HDDC2-210ENST00000609574 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
HDDC2-210ENST00000609574 C14orf132Q9NPU4 83 aa7.11□□□□□ -1.27
HDDC2-210ENST00000609574 PCP4L1A6NKN8 68 aa7.1□□□□□ -1.27
HDDC2-210ENST00000609574 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
HDDC2-210ENST00000609574 K7EQZ3 153 aa7.09□□□□□ -1.27
HDDC2-210ENST00000609574 KRTAP5-9P26371 169 aa7.09□□□□□ -1.27
HDDC2-210ENST00000609574 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
HDDC2-210ENST00000609574 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
HDDC2-210ENST00000609574 Q5W150 140 aa7.08□□□□□ -1.28
HDDC2-210ENST00000609574 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
HDDC2-210ENST00000609574 IMUPQ9GZP8 106 aa7.08□□□□□ -1.28
HDDC2-210ENST00000609574 KMT2DO14686 5537 aa7.07□□□□□ -1.28
HDDC2-210ENST00000609574 S4R3F8 94 aa7.07□□□□□ -1.28
HDDC2-210ENST00000609574 BPY2O14599 106 aa7.04□□□□□ -1.28
HDDC2-210ENST00000609574 HCG22E2RYF7 251 aa7.03□□□□□ -1.28
HDDC2-210ENST00000609574 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
HDDC2-210ENST00000609574 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
HDDC2-210ENST00000609574 CXCL6P80162 114 aa7.02□□□□□ -1.29
HDDC2-210ENST00000609574 CASC2Q6XLA1 102 aa7.02□□□□□ -1.29
HDDC2-210ENST00000609574 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
HDDC2-210ENST00000609574 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
HDDC2-210ENST00000609574 LCA10Q71F78 164 aa6.96□□□□□ -1.3
HDDC2-210ENST00000609574 NAA38Q9BRA0 125 aaKnown RBP6.96□□□□□ -1.3
HDDC2-210ENST00000609574 M0R143 59 aa6.94□□□□□ -1.3
HDDC2-210ENST00000609574 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
HDDC2-210ENST00000609574 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
HDDC2-210ENST00000609574 Q8N9L7 120 aa6.91□□□□□ -1.3
HDDC2-210ENST00000609574 BATFQ16520 125 aa6.9□□□□□ -1.3
HDDC2-210ENST00000609574 SPRR2EP22531 72 aa6.86□□□□□ -1.31
HDDC2-210ENST00000609574 SPRR2BP35325 72 aa6.86□□□□□ -1.31
HDDC2-210ENST00000609574 SPRR2AP35326 72 aa6.86□□□□□ -1.31
HDDC2-210ENST00000609574 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
HDDC2-210ENST00000609574 H3BT86 120 aa6.83□□□□□ -1.32
HDDC2-210ENST00000609574 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
HDDC2-210ENST00000609574 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
HDDC2-210ENST00000609574 COL5A1-AS1Q5SY13 56 aa6.81□□□□□ -1.32
HDDC2-210ENST00000609574 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
HDDC2-210ENST00000609574 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms