RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 NDUFB1O75438 58 aa8.13□□□□□ -1.11
CHMP4A-211ENST00000609024 DSCR8Q96T75 97 aa8.13□□□□□ -1.11
CHMP4A-211ENST00000609024 DLEU1O43261 78 aa8.12□□□□□ -1.11
CHMP4A-211ENST00000609024 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
CHMP4A-211ENST00000609024 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
CHMP4A-211ENST00000609024 A6NJY4 79 aa8.11□□□□□ -1.11
CHMP4A-211ENST00000609024 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
CHMP4A-211ENST00000609024 A6NN06 94 aa8.09□□□□□ -1.11
CHMP4A-211ENST00000609024 TRIAP1O43715 76 aa8.09□□□□□ -1.11
CHMP4A-211ENST00000609024 H1FX-AS1Q4G0G2 97 aa8.09□□□□□ -1.11
CHMP4A-211ENST00000609024 PSMB2P49721 201 aa8.07□□□□□ -1.12
CHMP4A-211ENST00000609024 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
CHMP4A-211ENST00000609024 HIGD1BQ9P298 99 aa8.07□□□□□ -1.12
CHMP4A-211ENST00000609024 C14orf144Q96I85 54 aa8.06□□□□□ -1.12
CHMP4A-211ENST00000609024 CEND1Q8N111 149 aa8.05□□□□□ -1.12
CHMP4A-211ENST00000609024 IGKV3D-7A0A0C4DH55 119 aa8.04□□□□□ -1.12
CHMP4A-211ENST00000609024 S100A6P06703 90 aa8.04□□□□□ -1.12
CHMP4A-211ENST00000609024 COX6CP09669 75 aa8.04□□□□□ -1.12
CHMP4A-211ENST00000609024 UBE2V1Q13404 147 aa8.04□□□□□ -1.12
CHMP4A-211ENST00000609024 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
CHMP4A-211ENST00000609024 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
CHMP4A-211ENST00000609024 PAM16Q9Y3D7 125 aa7.98□□□□□ -1.13
CHMP4A-211ENST00000609024 FAM236AA0A1B0GUQ0 79 aa7.97□□□□□ -1.13
CHMP4A-211ENST00000609024 FAM236BA0A1B0GV22 79 aa7.97□□□□□ -1.13
CHMP4A-211ENST00000609024 C9JAW5 83 aa7.97□□□□□ -1.13
CHMP4A-211ENST00000609024 SPATA45Q537H7 98 aa7.97□□□□□ -1.13
CHMP4A-211ENST00000609024 Q6ZVQ6 151 aa7.97□□□□□ -1.13
CHMP4A-211ENST00000609024 FXYD2P54710 66 aa7.96□□□□□ -1.14
CHMP4A-211ENST00000609024 C2orf91Q6ZV80 131 aa7.96□□□□□ -1.14
CHMP4A-211ENST00000609024 Q6ZQT0 140 aa7.95□□□□□ -1.14
CHMP4A-211ENST00000609024 Q5VV11 94 aa7.94□□□□□ -1.14
CHMP4A-211ENST00000609024 S100A1P23297 94 aa7.92□□□□□ -1.14
CHMP4A-211ENST00000609024 VAMP8Q9BV40 100 aa7.91□□□□□ -1.14
CHMP4A-211ENST00000609024 NDUFS5O43920 106 aa7.9□□□□□ -1.14
CHMP4A-211ENST00000609024 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
CHMP4A-211ENST00000609024 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
CHMP4A-211ENST00000609024 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
CHMP4A-211ENST00000609024 K7ERJ3 54 aa7.88□□□□□ -1.15
CHMP4A-211ENST00000609024 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
CHMP4A-211ENST00000609024 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
CHMP4A-211ENST00000609024 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
CHMP4A-211ENST00000609024 TMEM254Q8TBM7 123 aa7.86□□□□□ -1.15
CHMP4A-211ENST00000609024 MDN1Q9NU22 5596 aa7.85□□□□□ -1.15
CHMP4A-211ENST00000609024 KRTAP5-9P26371 169 aa7.85□□□□□ -1.15
CHMP4A-211ENST00000609024 MT1BP07438 61 aa7.84□□□□□ -1.15
CHMP4A-211ENST00000609024 C7orf65Q6ZTY9 151 aa7.84□□□□□ -1.15
CHMP4A-211ENST00000609024 PRR15Q8IV56 129 aa7.84□□□□□ -1.15
CHMP4A-211ENST00000609024 BAALC-AS2P0C853 105 aa7.83□□□□□ -1.16
CHMP4A-211ENST00000609024 C5orf47Q569G3 176 aa7.83□□□□□ -1.16
CHMP4A-211ENST00000609024 A0A1B0GW54 56 aa7.82□□□□□ -1.16
CHMP4A-211ENST00000609024 HSD52Q0P140 79 aa7.82□□□□□ -1.16
CHMP4A-211ENST00000609024 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
CHMP4A-211ENST00000609024 KMT2DO14686 5537 aa7.8□□□□□ -1.16
CHMP4A-211ENST00000609024 KRTAP2-3P0C7H8 128 aa7.8□□□□□ -1.16
CHMP4A-211ENST00000609024 KRTAP2-4Q9BYR9 128 aa7.8□□□□□ -1.16
CHMP4A-211ENST00000609024 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
CHMP4A-211ENST00000609024 MMP24-AS1A0A0U1RRL7 71 aa7.78□□□□□ -1.16
CHMP4A-211ENST00000609024 hDV103S1A0JD37 113 aa7.78□□□□□ -1.16
CHMP4A-211ENST00000609024 NREPQ16612 68 aa7.78□□□□□ -1.16
CHMP4A-211ENST00000609024 JMJD7-PLA2G4BH0Y9G9 81 aa7.77□□□□□ -1.17
CHMP4A-211ENST00000609024 KRTAP19-8Q3LI54 63 aa7.77□□□□□ -1.17
CHMP4A-211ENST00000609024 C4orf26Q17RF5 130 aa7.76□□□□□ -1.17
CHMP4A-211ENST00000609024 SPRR2GQ9BYE4 73 aa7.75□□□□□ -1.17
CHMP4A-211ENST00000609024 PDE6GP18545 87 aa7.74□□□□□ -1.17
CHMP4A-211ENST00000609024 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
CHMP4A-211ENST00000609024 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
CHMP4A-211ENST00000609024 S4R3F8 94 aa7.71□□□□□ -1.18
CHMP4A-211ENST00000609024 Q5W150 140 aa7.68□□□□□ -1.18
CHMP4A-211ENST00000609024 K7EQZ3 153 aa7.67□□□□□ -1.18
CHMP4A-211ENST00000609024 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
CHMP4A-211ENST00000609024 C14orf132Q9NPU4 83 aa7.67□□□□□ -1.18
CHMP4A-211ENST00000609024 KLKP1Q107X0 134 aa7.64□□□□□ -1.19
CHMP4A-211ENST00000609024 SPRR2EP22531 72 aa7.61□□□□□ -1.19
CHMP4A-211ENST00000609024 SPRR2BP35325 72 aa7.61□□□□□ -1.19
CHMP4A-211ENST00000609024 SPRR2AP35326 72 aa7.61□□□□□ -1.19
CHMP4A-211ENST00000609024 HCG22E2RYF7 251 aa7.6□□□□□ -1.19
CHMP4A-211ENST00000609024 SPRR2FQ96RM1 72 aa7.6□□□□□ -1.19
CHMP4A-211ENST00000609024 LCA10Q71F78 164 aa7.59□□□□□ -1.19
CHMP4A-211ENST00000609024 BPY2O14599 106 aa7.58□□□□□ -1.2
CHMP4A-211ENST00000609024 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
CHMP4A-211ENST00000609024 CXCL6P80162 114 aa7.57□□□□□ -1.2
CHMP4A-211ENST00000609024 C1orf64Q8NEQ6 169 aa7.57□□□□□ -1.2
CHMP4A-211ENST00000609024 UQCR10Q9UDW1 63 aa7.57□□□□□ -1.2
CHMP4A-211ENST00000609024 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
CHMP4A-211ENST00000609024 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
CHMP4A-211ENST00000609024 KRTAP2-2Q9BYT5 123 aa7.52□□□□□ -1.21
CHMP4A-211ENST00000609024 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.21
CHMP4A-211ENST00000609024 NAA38Q9BRA0 125 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-211ENST00000609024 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-211ENST00000609024 Q8N9L7 120 aa7.47□□□□□ -1.21
CHMP4A-211ENST00000609024 PYY3Q5JQD4 70 aa7.46□□□□□ -1.22
CHMP4A-211ENST00000609024 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
CHMP4A-211ENST00000609024 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
CHMP4A-211ENST00000609024 M0R143 59 aa7.38□□□□□ -1.23
CHMP4A-211ENST00000609024 TSTD3H0UI37 97 aa7.37□□□□□ -1.23
CHMP4A-211ENST00000609024 SPRR2DP22532 72 aa7.37□□□□□ -1.23
CHMP4A-211ENST00000609024 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
CHMP4A-211ENST00000609024 H3BT86 120 aa7.3□□□□□ -1.24
CHMP4A-211ENST00000609024 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
CHMP4A-211ENST00000609024 A8MUN3 132 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms