RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 IGHV6-1A0A0B4J1U7 121 aa12.68□□□□□ -0.38
FOCAD-211ENST00000604036 J3KT08 172 aa12.67□□□□□ -0.38
FOCAD-211ENST00000604036 SMCPP49901 116 aaPredicted RBP12.67□□□□□ -0.38
FOCAD-211ENST00000604036 ATP11AUNQ6ZP68 121 aa12.67□□□□□ -0.38
FOCAD-211ENST00000604036 C20orf166-AS1Q96NR2 134 aa12.66□□□□□ -0.38
FOCAD-211ENST00000604036 FAT4Q6V0I7 4981 aa12.65□□□□□ -0.38
FOCAD-211ENST00000604036 NOTCH2NLQ7Z3S9 236 aa12.65□□□□□ -0.38
FOCAD-211ENST00000604036 A8MUU9 505 aa12.64□□□□□ -0.39
FOCAD-211ENST00000604036 A0A1B0GVX0 72 aa12.63□□□□□ -0.39
FOCAD-211ENST00000604036 KRTAP9-6A0A140TA67 174 aa12.62□□□□□ -0.39
FOCAD-211ENST00000604036 NREPQ16612 68 aa12.62□□□□□ -0.39
FOCAD-211ENST00000604036 PRO0461Q9UI25 63 aa12.62□□□□□ -0.39
FOCAD-211ENST00000604036 GTF2H5Q6ZYL4 71 aa12.61□□□□□ -0.39
FOCAD-211ENST00000604036 KRTAP16-1A8MUX0 517 aa12.59□□□□□ -0.39
FOCAD-211ENST00000604036 C8orf87E5RJ46 101 aa12.59□□□□□ -0.39
FOCAD-211ENST00000604036 NDUFB1O75438 58 aa12.58□□□□□ -0.4
FOCAD-211ENST00000604036 A8MWP4 228 aa12.53□□□□□ -0.4
FOCAD-211ENST00000604036 IGKV3D-7A0A0C4DH55 119 aa12.49□□□□□ -0.41
FOCAD-211ENST00000604036 F8W1H4 67 aa12.47□□□□□ -0.41
FOCAD-211ENST00000604036 KRTAP19-2Q3LHN2 52 aa12.45□□□□□ -0.42
FOCAD-211ENST00000604036 C8orf17Q9NRJ1 99 aa12.45□□□□□ -0.42
FOCAD-211ENST00000604036 LCE2CQ5TA81 110 aa12.43□□□□□ -0.42
FOCAD-211ENST00000604036 PRR15Q8IV56 129 aa12.43□□□□□ -0.42
FOCAD-211ENST00000604036 Q6ZVQ6 151 aa12.41□□□□□ -0.42
FOCAD-211ENST00000604036 BPY2O14599 106 aa12.4□□□□□ -0.42
FOCAD-211ENST00000604036 ETDBQ3ZM63 59 aa12.39□□□□□ -0.43
FOCAD-211ENST00000604036 K7EQZ3 153 aa12.36□□□□□ -0.43
FOCAD-211ENST00000604036 COX6B2Q6YFQ2 88 aa12.35□□□□□ -0.43
FOCAD-211ENST00000604036 LINC00846Q9NV44 126 aa12.35□□□□□ -0.43
FOCAD-211ENST00000604036 Q8N9P0 234 aaPredicted RBP12.34□□□□□ -0.43
FOCAD-211ENST00000604036 UBL5Q9BZL1 73 aa12.33□□□□□ -0.44
FOCAD-211ENST00000604036 MMP24-AS1A0A0U1RRL7 71 aa12.32□□□□□ -0.44
FOCAD-211ENST00000604036 ZCCHC13Q8WW36 166 aaKnown RBP12.29□□□□□ -0.44
FOCAD-211ENST00000604036 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
FOCAD-211ENST00000604036 Q8N9L7 120 aa12.27□□□□□ -0.45
FOCAD-211ENST00000604036 hDV103S1A0JD37 113 aa12.26□□□□□ -0.45
FOCAD-211ENST00000604036 MT1HP80294 61 aa12.26□□□□□ -0.45
FOCAD-211ENST00000604036 MRPL34Q9BQ48 92 aaKnown RBP12.26□□□□□ -0.45
FOCAD-211ENST00000604036 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
FOCAD-211ENST00000604036 A0A1B0GV90 55 aa12.18□□□□□ -0.46
FOCAD-211ENST00000604036 NDUFS5O43920 106 aa12.18□□□□□ -0.46
FOCAD-211ENST00000604036 WFDC13Q8IUB5 93 aa12.18□□□□□ -0.46
FOCAD-211ENST00000604036 CASC2Q6XLA1 102 aa12.15□□□□□ -0.46
FOCAD-211ENST00000604036 HRES1P13985 223 aa12.13□□□□□ -0.47
FOCAD-211ENST00000604036 M0R2T5 61 aa12.12□□□□□ -0.47
FOCAD-211ENST00000604036 SPINK7P58062 85 aa12.12□□□□□ -0.47
FOCAD-211ENST00000604036 CRCT1Q9UGL9 99 aa12.12□□□□□ -0.47
FOCAD-211ENST00000604036 FAM236DA0A1B0GTK5 79 aa12.09□□□□□ -0.47
FOCAD-211ENST00000604036 FAM236CP0DP71 79 aa12.09□□□□□ -0.47
FOCAD-211ENST00000604036 RBM12B-AS1Q9P1G2 102 aa12.09□□□□□ -0.47
FOCAD-211ENST00000604036 FLGP20930 4061 aaPredicted RBP12.08□□□□□ -0.48
FOCAD-211ENST00000604036 ACYP1P07311 99 aa12.08□□□□□ -0.48
FOCAD-211ENST00000604036 CXCL6P80162 114 aa12.07□□□□□ -0.48
FOCAD-211ENST00000604036 MPLKIPQ8TAP9 179 aa12.07□□□□□ -0.48
FOCAD-211ENST00000604036 HCG22E2RYF7 251 aa12.06□□□□□ -0.48
FOCAD-211ENST00000604036 FAM240AA0A1B0GVK7 77 aa12.02□□□□□ -0.49
FOCAD-211ENST00000604036 FSIP2Q5CZC0 6907 aa12□□□□□ -0.49
FOCAD-211ENST00000604036 Q5W150 140 aa11.99□□□□□ -0.49
FOCAD-211ENST00000604036 KRTAP10-6P60371 365 aaPredicted RBP11.97□□□□□ -0.49
FOCAD-211ENST00000604036 LORP23490 312 aaPredicted RBP11.94□□□□□ -0.5
FOCAD-211ENST00000604036 IGKV2D-30A0A075B6S6 120 aa11.91□□□□□ -0.5
FOCAD-211ENST00000604036 IGKV2-30P06310 120 aa11.91□□□□□ -0.5
FOCAD-211ENST00000604036 ATP5EP2Q5VTU8 51 aa11.88□□□□□ -0.51
FOCAD-211ENST00000604036 C7orf65Q6ZTY9 151 aa11.86□□□□□ -0.51
FOCAD-211ENST00000604036 HIST1H4AP62805 103 aaKnown RBP11.82□□□□□ -0.52
FOCAD-211ENST00000604036 TP53AIP1Q9HCN2 124 aa11.82□□□□□ -0.52
FOCAD-211ENST00000604036 LINC00643Q86TS7 51 aa11.8□□□□□ -0.52
FOCAD-211ENST00000604036 J3QR89 54 aa11.76□□□□□ -0.53
FOCAD-211ENST00000604036 A0A087WVE0 104 aa11.67□□□□□ -0.54
FOCAD-211ENST00000604036 C4orf26Q17RF5 130 aa11.66□□□□□ -0.54
FOCAD-211ENST00000604036 H1FX-AS1Q4G0G2 97 aa11.66□□□□□ -0.54
FOCAD-211ENST00000604036 KRTAP9-8Q9BYQ0 159 aa11.65□□□□□ -0.54
FOCAD-211ENST00000604036 TRAV22A0A0B4J277 110 aa11.6□□□□□ -0.55
FOCAD-211ENST00000604036 UQCRQO14949 82 aa11.56□□□□□ -0.56
FOCAD-211ENST00000604036 MT2AP02795 61 aa11.53□□□□□ -0.56
FOCAD-211ENST00000604036 CYP4F30PQ9H0H9 118 aa11.53□□□□□ -0.56
FOCAD-211ENST00000604036 LOC101927531A0A1B0GV80 90 aa11.5□□□□□ -0.57
FOCAD-211ENST00000604036 H0Y9P7 68 aa11.5□□□□□ -0.57
FOCAD-211ENST00000604036 C1orf64Q8NEQ6 169 aa11.49□□□□□ -0.57
FOCAD-211ENST00000604036 KRTAP3-1Q9BYR8 98 aa11.47□□□□□ -0.57
FOCAD-211ENST00000604036 K7ERU9 68 aa11.46□□□□□ -0.57
FOCAD-211ENST00000604036 ATOX1O00244 68 aa11.46□□□□□ -0.57
FOCAD-211ENST00000604036 MT1FP04733 61 aa11.44□□□□□ -0.58
FOCAD-211ENST00000604036 KRTAP10-10P60014 251 aa11.43□□□□□ -0.58
FOCAD-211ENST00000604036 OCR1Q9BZK8 76 aa11.41□□□□□ -0.58
FOCAD-211ENST00000604036 LINC00208Q96KT6 92 aa11.35□□□□□ -0.59
FOCAD-211ENST00000604036 SCGB1A1P11684 91 aa11.34□□□□□ -0.59
FOCAD-211ENST00000604036 S4R3F8 94 aa11.34□□□□□ -0.59
FOCAD-211ENST00000604036 MP68P56378 58 aa11.33□□□□□ -0.6
FOCAD-211ENST00000604036 MT-ATP8P03928 68 aa11.32□□□□□ -0.6
FOCAD-211ENST00000604036 IMUPQ9GZP8 106 aa11.32□□□□□ -0.6
FOCAD-211ENST00000604036 KRTAP9-7A8MTY7 169 aa11.31□□□□□ -0.6
FOCAD-211ENST00000604036 C5orf47Q569G3 176 aa11.3□□□□□ -0.6
FOCAD-211ENST00000604036 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.27□□□□□ -0.61
FOCAD-211ENST00000604036 KRTAP9-3Q9BYQ3 159 aa11.27□□□□□ -0.61
FOCAD-211ENST00000604036 LCA10Q71F78 164 aa11.26□□□□□ -0.61
FOCAD-211ENST00000604036 KLKP1Q107X0 134 aa11.22□□□□□ -0.61
FOCAD-211ENST00000604036 CSAG1Q6PB30 78 aa11.21□□□□□ -0.61
FOCAD-211ENST00000604036 H3BPC8 53 aa11.19□□□□□ -0.62
FOCAD-211ENST00000604036 FAM236AA0A1B0GUQ0 79 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms