RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 A0A1B0GW54 56 aa10.61□□□□□ -0.71
SSBP4-210ENST00000601444 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
SSBP4-210ENST00000601444 K7EP34 96 aa10.6□□□□□ -0.71
SSBP4-210ENST00000601444 A8MUU9 505 aa10.59□□□□□ -0.71
SSBP4-210ENST00000601444 KRTAP16-1A8MUX0 517 aa10.58□□□□□ -0.72
SSBP4-210ENST00000601444 LCE2AQ5TA79 106 aaPredicted RBP10.58□□□□□ -0.72
SSBP4-210ENST00000601444 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
SSBP4-210ENST00000601444 PRO0461Q9UI25 63 aa10.58□□□□□ -0.72
SSBP4-210ENST00000601444 A0A1B0GVX0 72 aa10.56□□□□□ -0.72
SSBP4-210ENST00000601444 J3KT08 172 aa10.55□□□□□ -0.72
SSBP4-210ENST00000601444 KRTAP19-2Q3LHN2 52 aa10.53□□□□□ -0.72
SSBP4-210ENST00000601444 NREPQ16612 68 aa10.52□□□□□ -0.73
SSBP4-210ENST00000601444 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
SSBP4-210ENST00000601444 GTF2H5Q6ZYL4 71 aa10.5□□□□□ -0.73
SSBP4-210ENST00000601444 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
SSBP4-210ENST00000601444 IGKV3D-7A0A0C4DH55 119 aa10.47□□□□□ -0.73
SSBP4-210ENST00000601444 A8MWP4 228 aa10.47□□□□□ -0.73
SSBP4-210ENST00000601444 NDUFB1O75438 58 aa10.46□□□□□ -0.73
SSBP4-210ENST00000601444 F8W1H4 67 aa10.41□□□□□ -0.74
SSBP4-210ENST00000601444 C8orf17Q9NRJ1 99 aa10.41□□□□□ -0.74
SSBP4-210ENST00000601444 PRR15Q8IV56 129 aa10.4□□□□□ -0.74
SSBP4-210ENST00000601444 Q6ZVQ6 151 aa10.38□□□□□ -0.75
SSBP4-210ENST00000601444 K7EQZ3 153 aa10.36□□□□□ -0.75
SSBP4-210ENST00000601444 BPY2O14599 106 aa10.34□□□□□ -0.75
SSBP4-210ENST00000601444 MT1HP80294 61 aa10.34□□□□□ -0.75
SSBP4-210ENST00000601444 ETDBQ3ZM63 59 aa10.34□□□□□ -0.75
SSBP4-210ENST00000601444 LINC00846Q9NV44 126 aa10.34□□□□□ -0.75
SSBP4-210ENST00000601444 Q8N9P0 234 aaPredicted RBP10.33□□□□□ -0.76
SSBP4-210ENST00000601444 MMP24-AS1A0A0U1RRL7 71 aa10.32□□□□□ -0.76
SSBP4-210ENST00000601444 COX6B2Q6YFQ2 88 aa10.31□□□□□ -0.76
SSBP4-210ENST00000601444 Q8N9L7 120 aa10.29□□□□□ -0.76
SSBP4-210ENST00000601444 ZCCHC13Q8WW36 166 aaKnown RBP10.28□□□□□ -0.76
SSBP4-210ENST00000601444 TMEM254Q8TBM7 123 aa10.25□□□□□ -0.77
SSBP4-210ENST00000601444 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
SSBP4-210ENST00000601444 hDV103S1A0JD37 113 aa10.24□□□□□ -0.77
SSBP4-210ENST00000601444 MRPL34Q9BQ48 92 aaKnown RBP10.24□□□□□ -0.77
SSBP4-210ENST00000601444 FLGP20930 4061 aaPredicted RBP10.22□□□□□ -0.77
SSBP4-210ENST00000601444 HRES1P13985 223 aa10.2□□□□□ -0.78
SSBP4-210ENST00000601444 A0A1B0GV90 55 aa10.19□□□□□ -0.78
SSBP4-210ENST00000601444 WFDC13Q8IUB5 93 aa10.18□□□□□ -0.78
SSBP4-210ENST00000601444 NDUFS5O43920 106 aa10.16□□□□□ -0.78
SSBP4-210ENST00000601444 SPINK7P58062 85 aa10.16□□□□□ -0.78
SSBP4-210ENST00000601444 MPLKIPQ8TAP9 179 aa10.15□□□□□ -0.78
SSBP4-210ENST00000601444 M0R2T5 61 aa10.14□□□□□ -0.79
SSBP4-210ENST00000601444 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
SSBP4-210ENST00000601444 KRTAP10-6P60371 365 aaPredicted RBP10.09□□□□□ -0.79
SSBP4-210ENST00000601444 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
SSBP4-210ENST00000601444 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
SSBP4-210ENST00000601444 RBM12B-AS1Q9P1G2 102 aa10.08□□□□□ -0.8
SSBP4-210ENST00000601444 HCG22E2RYF7 251 aa10.07□□□□□ -0.8
SSBP4-210ENST00000601444 ACYP1P07311 99 aa10.07□□□□□ -0.8
SSBP4-210ENST00000601444 LORP23490 312 aaPredicted RBP10.07□□□□□ -0.8
SSBP4-210ENST00000601444 Q5W150 140 aa10.07□□□□□ -0.8
SSBP4-210ENST00000601444 CXCL6P80162 114 aa10.06□□□□□ -0.8
SSBP4-210ENST00000601444 KRTAP9-2Q9BYQ4 174 aa10.06□□□□□ -0.8
SSBP4-210ENST00000601444 FAM240AA0A1B0GVK7 77 aa10.02□□□□□ -0.81
SSBP4-210ENST00000601444 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
SSBP4-210ENST00000601444 IGKV2-30P06310 120 aa9.95□□□□□ -0.82
SSBP4-210ENST00000601444 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
SSBP4-210ENST00000601444 ATP5EP2Q5VTU8 51 aa9.89□□□□□ -0.83
SSBP4-210ENST00000601444 C7orf65Q6ZTY9 151 aa9.89□□□□□ -0.83
SSBP4-210ENST00000601444 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
SSBP4-210ENST00000601444 LINC00643Q86TS7 51 aa9.85□□□□□ -0.83
SSBP4-210ENST00000601444 KRTAP9-8Q9BYQ0 159 aa9.84□□□□□ -0.83
SSBP4-210ENST00000601444 TP53AIP1Q9HCN2 124 aa9.83□□□□□ -0.84
SSBP4-210ENST00000601444 A0A087WVE0 104 aa9.78□□□□□ -0.84
SSBP4-210ENST00000601444 J3QR89 54 aa9.78□□□□□ -0.84
SSBP4-210ENST00000601444 C4orf26Q17RF5 130 aa9.77□□□□□ -0.85
SSBP4-210ENST00000601444 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
SSBP4-210ENST00000601444 MT2AP02795 61 aa9.72□□□□□ -0.85
SSBP4-210ENST00000601444 TRAV22A0A0B4J277 110 aa9.66□□□□□ -0.86
SSBP4-210ENST00000601444 MT1FP04733 61 aa9.66□□□□□ -0.86
SSBP4-210ENST00000601444 KRTAP3-1Q9BYR8 98 aa9.66□□□□□ -0.86
SSBP4-210ENST00000601444 CYP4F30PQ9H0H9 118 aa9.64□□□□□ -0.87
SSBP4-210ENST00000601444 UQCRQO14949 82 aa9.63□□□□□ -0.87
SSBP4-210ENST00000601444 KRTAP9-6A0A140TA67 174 aa9.61□□□□□ -0.87
SSBP4-210ENST00000601444 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
SSBP4-210ENST00000601444 H0Y9P7 68 aa9.59□□□□□ -0.87
SSBP4-210ENST00000601444 KRTAP10-10P60014 251 aa9.59□□□□□ -0.87
SSBP4-210ENST00000601444 FSIP2Q5CZC0 6907 aa9.58□□□□□ -0.88
SSBP4-210ENST00000601444 LOC101927531A0A1B0GV80 90 aa9.57□□□□□ -0.88
SSBP4-210ENST00000601444 K7ERU9 68 aa9.55□□□□□ -0.88
SSBP4-210ENST00000601444 OCR1Q9BZK8 76 aa9.54□□□□□ -0.88
SSBP4-210ENST00000601444 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
SSBP4-210ENST00000601444 ATOX1O00244 68 aa9.53□□□□□ -0.88
SSBP4-210ENST00000601444 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
SSBP4-210ENST00000601444 MT-ATP8P03928 68 aa9.47□□□□□ -0.89
SSBP4-210ENST00000601444 C5orf47Q569G3 176 aa9.47□□□□□ -0.89
SSBP4-210ENST00000601444 LINC00208Q96KT6 92 aa9.47□□□□□ -0.89
SSBP4-210ENST00000601444 S4R3F8 94 aa9.47□□□□□ -0.89
SSBP4-210ENST00000601444 LCA10Q71F78 164 aa9.45□□□□□ -0.9
SSBP4-210ENST00000601444 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
SSBP4-210ENST00000601444 IMUPQ9GZP8 106 aa9.44□□□□□ -0.9
SSBP4-210ENST00000601444 LCE2BO14633 110 aa9.43□□□□□ -0.9
SSBP4-210ENST00000601444 MP68P56378 58 aa9.42□□□□□ -0.9
SSBP4-210ENST00000601444 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
SSBP4-210ENST00000601444 USH2AO75445 5202 aa9.38□□□□□ -0.91
SSBP4-210ENST00000601444 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
SSBP4-210ENST00000601444 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
SSBP4-210ENST00000601444 H3BPC8 53 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms