RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
CHMP2A-206ENST00000600118 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
CHMP2A-206ENST00000600118 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
CHMP2A-206ENST00000600118 ACYP1P07311 99 aa6.92□□□□□ -1.3
CHMP2A-206ENST00000600118 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
CHMP2A-206ENST00000600118 UBR4Q5T4S7 5183 aa6.91□□□□□ -1.3
CHMP2A-206ENST00000600118 UBL5Q9BZL1 73 aa6.91□□□□□ -1.3
CHMP2A-206ENST00000600118 A8MWP4 228 aa6.9□□□□□ -1.3
CHMP2A-206ENST00000600118 DSCR10P59022 87 aa6.9□□□□□ -1.3
CHMP2A-206ENST00000600118 XP32Q5T750 250 aa6.9□□□□□ -1.3
CHMP2A-206ENST00000600118 A0A1B0GVX0 72 aa6.89□□□□□ -1.31
CHMP2A-206ENST00000600118 IGKV3D-7A0A0C4DH55 119 aa6.88□□□□□ -1.31
CHMP2A-206ENST00000600118 BPY2O14599 106 aa6.88□□□□□ -1.31
CHMP2A-206ENST00000600118 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
CHMP2A-206ENST00000600118 NDUFB1O75438 58 aa6.87□□□□□ -1.31
CHMP2A-206ENST00000600118 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
CHMP2A-206ENST00000600118 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
CHMP2A-206ENST00000600118 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
CHMP2A-206ENST00000600118 LINC00313P59037 77 aa6.85□□□□□ -1.31
CHMP2A-206ENST00000600118 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
CHMP2A-206ENST00000600118 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
CHMP2A-206ENST00000600118 J3QR89 54 aa6.84□□□□□ -1.31
CHMP2A-206ENST00000600118 K7EQZ3 153 aa6.84□□□□□ -1.31
CHMP2A-206ENST00000600118 CXCL6P80162 114 aa6.82□□□□□ -1.32
CHMP2A-206ENST00000600118 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
CHMP2A-206ENST00000600118 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
CHMP2A-206ENST00000600118 Q8N9L7 120 aa6.81□□□□□ -1.32
CHMP2A-206ENST00000600118 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
CHMP2A-206ENST00000600118 A8MUU9 505 aa6.8□□□□□ -1.32
CHMP2A-206ENST00000600118 Q75L30 129 aa6.8□□□□□ -1.32
CHMP2A-206ENST00000600118 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
CHMP2A-206ENST00000600118 MMP24-AS1A0A0U1RRL7 71 aa6.79□□□□□ -1.32
CHMP2A-206ENST00000600118 ATP5EP2Q5VTU8 51 aa6.78□□□□□ -1.32
CHMP2A-206ENST00000600118 LINC00643Q86TS7 51 aa6.78□□□□□ -1.32
CHMP2A-206ENST00000600118 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
CHMP2A-206ENST00000600118 K7ERU9 68 aa6.76□□□□□ -1.33
CHMP2A-206ENST00000600118 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
CHMP2A-206ENST00000600118 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
CHMP2A-206ENST00000600118 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
CHMP2A-206ENST00000600118 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
CHMP2A-206ENST00000600118 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
CHMP2A-206ENST00000600118 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
CHMP2A-206ENST00000600118 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
CHMP2A-206ENST00000600118 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
CHMP2A-206ENST00000600118 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
CHMP2A-206ENST00000600118 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
CHMP2A-206ENST00000600118 MUC2Q02817 5179 aa6.67□□□□□ -1.34
CHMP2A-206ENST00000600118 HIST1H4AP62805 103 aaKnown RBP6.65□□□□□ -1.34
CHMP2A-206ENST00000600118 ZCCHC13Q8WW36 166 aaKnown RBP6.64□□□□□ -1.35
CHMP2A-206ENST00000600118 A0A087WVE0 104 aa6.62□□□□□ -1.35
CHMP2A-206ENST00000600118 NDUFS5O43920 106 aa6.61□□□□□ -1.35
CHMP2A-206ENST00000600118 MT-ATP8P03928 68 aa6.61□□□□□ -1.35
CHMP2A-206ENST00000600118 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
CHMP2A-206ENST00000600118 Q5W150 140 aa6.58□□□□□ -1.36
CHMP2A-206ENST00000600118 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
CHMP2A-206ENST00000600118 SPINK7P58062 85 aa6.51□□□□□ -1.37
CHMP2A-206ENST00000600118 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
CHMP2A-206ENST00000600118 HRES1P13985 223 aa6.49□□□□□ -1.37
CHMP2A-206ENST00000600118 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
CHMP2A-206ENST00000600118 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
CHMP2A-206ENST00000600118 UQCRQO14949 82 aa6.48□□□□□ -1.37
CHMP2A-206ENST00000600118 MPLKIPQ8TAP9 179 aa6.47□□□□□ -1.37
CHMP2A-206ENST00000600118 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
CHMP2A-206ENST00000600118 A0A0U1RQV1 116 aa6.45□□□□□ -1.38
CHMP2A-206ENST00000600118 FAM236AA0A1B0GUQ0 79 aa6.45□□□□□ -1.38
CHMP2A-206ENST00000600118 FAM236BA0A1B0GV22 79 aa6.45□□□□□ -1.38
CHMP2A-206ENST00000600118 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
CHMP2A-206ENST00000600118 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
CHMP2A-206ENST00000600118 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
CHMP2A-206ENST00000600118 SCGB1A1P11684 91 aa6.43□□□□□ -1.38
CHMP2A-206ENST00000600118 H0Y9P7 68 aa6.4□□□□□ -1.38
CHMP2A-206ENST00000600118 ATOX1O00244 68 aa6.39□□□□□ -1.39
CHMP2A-206ENST00000600118 LOC101927531A0A1B0GV80 90 aa6.38□□□□□ -1.39
CHMP2A-206ENST00000600118 C5orf47Q569G3 176 aa6.38□□□□□ -1.39
CHMP2A-206ENST00000600118 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
CHMP2A-206ENST00000600118 SMIM20Q8N5G0 67 aa6.37□□□□□ -1.39
CHMP2A-206ENST00000600118 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
CHMP2A-206ENST00000600118 TRAV7A0A075B6U4 112 aa6.36□□□□□ -1.39
CHMP2A-206ENST00000600118 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
CHMP2A-206ENST00000600118 MP68P56378 58 aa6.35□□□□□ -1.39
CHMP2A-206ENST00000600118 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
CHMP2A-206ENST00000600118 LINC00208Q96KT6 92 aa6.34□□□□□ -1.39
CHMP2A-206ENST00000600118 H3BPC8 53 aa6.33□□□□□ -1.4
CHMP2A-206ENST00000600118 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
CHMP2A-206ENST00000600118 MT1HP80294 61 aa6.32□□□□□ -1.4
CHMP2A-206ENST00000600118 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
CHMP2A-206ENST00000600118 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
CHMP2A-206ENST00000600118 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
CHMP2A-206ENST00000600118 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
CHMP2A-206ENST00000600118 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
CHMP2A-206ENST00000600118 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
CHMP2A-206ENST00000600118 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CHMP2A-206ENST00000600118 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
CHMP2A-206ENST00000600118 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
CHMP2A-206ENST00000600118 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
CHMP2A-206ENST00000600118 COX7CP15954 63 aa6.19□□□□□ -1.42
CHMP2A-206ENST00000600118 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
CHMP2A-206ENST00000600118 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
CHMP2A-206ENST00000600118 SNURFQ9Y675 71 aa6.18□□□□□ -1.42
CHMP2A-206ENST00000600118 M0R2T5 61 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms