RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 J3KT08 172 aa11.64□□□□□ -0.55
SSBP4-205ENST00000598159 ATXN8Q156A1 80 aa11.62□□□□□ -0.55
SSBP4-205ENST00000598159 Q6ZQT0 140 aa11.61□□□□□ -0.55
SSBP4-205ENST00000598159 JMJD7-PLA2G4BH0Y9G9 81 aa11.6□□□□□ -0.55
SSBP4-205ENST00000598159 RBM12B-AS1Q9P1G2 102 aa11.6□□□□□ -0.55
SSBP4-205ENST00000598159 FAM236DA0A1B0GTK5 79 aa11.59□□□□□ -0.55
SSBP4-205ENST00000598159 FAM236CP0DP71 79 aa11.59□□□□□ -0.55
SSBP4-205ENST00000598159 A0A1B0GW54 56 aa11.57□□□□□ -0.56
SSBP4-205ENST00000598159 HRES1P13985 223 aa11.56□□□□□ -0.56
SSBP4-205ENST00000598159 MPLKIPQ8TAP9 179 aa11.56□□□□□ -0.56
SSBP4-205ENST00000598159 KRTAP9-8Q9BYQ0 159 aa11.56□□□□□ -0.56
SSBP4-205ENST00000598159 NDUFB1O75438 58 aa11.55□□□□□ -0.56
SSBP4-205ENST00000598159 NAA38Q9BRA0 125 aaKnown RBP11.55□□□□□ -0.56
SSBP4-205ENST00000598159 PDE6GP18545 87 aa11.54□□□□□ -0.56
SSBP4-205ENST00000598159 LOC110117498A0A087WWA1 95 aa11.53□□□□□ -0.56
SSBP4-205ENST00000598159 TSTD3H0UI37 97 aa11.53□□□□□ -0.56
SSBP4-205ENST00000598159 ZCCHC13Q8WW36 166 aaKnown RBP11.5□□□□□ -0.57
SSBP4-205ENST00000598159 LYRM7Q5U5X0 104 aa11.48□□□□□ -0.57
SSBP4-205ENST00000598159 LOC105371267A0A1B0GV96 52 aa11.47□□□□□ -0.57
SSBP4-205ENST00000598159 Q8N9P0 234 aaPredicted RBP11.47□□□□□ -0.57
SSBP4-205ENST00000598159 A8MWP4 228 aa11.46□□□□□ -0.57
SSBP4-205ENST00000598159 MTURNQ8N3F0 131 aa11.45□□□□□ -0.58
SSBP4-205ENST00000598159 C14orf132Q9NPU4 83 aa11.43□□□□□ -0.58
SSBP4-205ENST00000598159 C8orf17Q9NRJ1 99 aa11.43□□□□□ -0.58
SSBP4-205ENST00000598159 SPINK7P58062 85 aa11.42□□□□□ -0.58
SSBP4-205ENST00000598159 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.58
SSBP4-205ENST00000598159 NREPQ16612 68 aa11.39□□□□□ -0.59
SSBP4-205ENST00000598159 BATFQ16520 125 aa11.38□□□□□ -0.59
SSBP4-205ENST00000598159 MT2AP02795 61 aa11.35□□□□□ -0.59
SSBP4-205ENST00000598159 Q6ZVQ6 151 aa11.35□□□□□ -0.59
SSBP4-205ENST00000598159 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
SSBP4-205ENST00000598159 C9orf118A6NHY6 69 aa11.29□□□□□ -0.6
SSBP4-205ENST00000598159 H3BT86 120 aa11.28□□□□□ -0.6
SSBP4-205ENST00000598159 MT1FP04733 61 aa11.26□□□□□ -0.61
SSBP4-205ENST00000598159 KRTAP10-10P60014 251 aa11.25□□□□□ -0.61
SSBP4-205ENST00000598159 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
SSBP4-205ENST00000598159 MRPL34Q9BQ48 92 aaKnown RBP11.25□□□□□ -0.61
SSBP4-205ENST00000598159 MMP24-AS1A0A0U1RRL7 71 aa11.23□□□□□ -0.61
SSBP4-205ENST00000598159 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
SSBP4-205ENST00000598159 TAX1BP3O14907 124 aa11.22□□□□□ -0.61
SSBP4-205ENST00000598159 WFDC13Q8IUB5 93 aa11.22□□□□□ -0.61
SSBP4-205ENST00000598159 USH2AO75445 5202 aa11.22□□□□□ -0.61
SSBP4-205ENST00000598159 KRTAP9-3Q9BYQ3 159 aa11.2□□□□□ -0.62
SSBP4-205ENST00000598159 hDV103S1A0JD37 113 aa11.19□□□□□ -0.62
SSBP4-205ENST00000598159 K7EQZ3 153 aa11.18□□□□□ -0.62
SSBP4-205ENST00000598159 SSPOA2VEC9 5147 aa11.15□□□□□ -0.62
SSBP4-205ENST00000598159 BPY2O14599 106 aa11.15□□□□□ -0.62
SSBP4-205ENST00000598159 LCE2BO14633 110 aa11.14□□□□□ -0.63
SSBP4-205ENST00000598159 NDUFS5O43920 106 aa11.14□□□□□ -0.63
SSBP4-205ENST00000598159 COL5A1-AS1Q5SY13 56 aa11.06□□□□□ -0.64
SSBP4-205ENST00000598159 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
SSBP4-205ENST00000598159 H1FX-AS1Q4G0G2 97 aa11.04□□□□□ -0.64
SSBP4-205ENST00000598159 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-205ENST00000598159 Q5W150 140 aa11□□□□□ -0.65
SSBP4-205ENST00000598159 CASC2Q6XLA1 102 aa11□□□□□ -0.65
SSBP4-205ENST00000598159 IGKV2D-30A0A075B6S6 120 aa10.99□□□□□ -0.65
SSBP4-205ENST00000598159 IGKV2-30P06310 120 aa10.99□□□□□ -0.65
SSBP4-205ENST00000598159 SMCPP49901 116 aaPredicted RBP10.99□□□□□ -0.65
SSBP4-205ENST00000598159 KRTAP19-1Q8IUB9 90 aa10.99□□□□□ -0.65
SSBP4-205ENST00000598159 C7orf65Q6ZTY9 151 aa10.98□□□□□ -0.65
SSBP4-205ENST00000598159 Q8N9L7 120 aa10.97□□□□□ -0.65
SSBP4-205ENST00000598159 HCG22E2RYF7 251 aa10.95□□□□□ -0.66
SSBP4-205ENST00000598159 KRTAP9-7A8MTY7 169 aa10.93□□□□□ -0.66
SSBP4-205ENST00000598159 UBL5Q9BZL1 73 aa10.92□□□□□ -0.66
SSBP4-205ENST00000598159 CXCL6P80162 114 aa10.91□□□□□ -0.66
SSBP4-205ENST00000598159 FCGBPQ9Y6R7 5405 aaPredicted RBP10.9□□□□□ -0.66
SSBP4-205ENST00000598159 LINC00846Q9NV44 126 aa10.9□□□□□ -0.66
SSBP4-205ENST00000598159 K7EP34 96 aa10.89□□□□□ -0.67
SSBP4-205ENST00000598159 PCP4L1A6NKN8 68 aa10.88□□□□□ -0.67
SSBP4-205ENST00000598159 PRO0461Q9UI25 63 aa10.88□□□□□ -0.67
SSBP4-205ENST00000598159 GTF2H5Q6ZYL4 71 aa10.83□□□□□ -0.68
SSBP4-205ENST00000598159 C4orf26Q17RF5 130 aa10.81□□□□□ -0.68
SSBP4-205ENST00000598159 KRTAP19-6Q3LI70 58 aa10.79□□□□□ -0.68
SSBP4-205ENST00000598159 F8W1H4 67 aa10.74□□□□□ -0.69
SSBP4-205ENST00000598159 TP53AIP1Q9HCN2 124 aa10.7□□□□□ -0.7
SSBP4-205ENST00000598159 KRTAP3-1Q9BYR8 98 aa10.66□□□□□ -0.7
SSBP4-205ENST00000598159 MACF1Q9UPN3 7388 aaKnown RBP10.64□□□□□ -0.71
SSBP4-205ENST00000598159 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
SSBP4-205ENST00000598159 C1orf64Q8NEQ6 169 aa10.63□□□□□ -0.71
SSBP4-205ENST00000598159 ETDBQ3ZM63 59 aa10.62□□□□□ -0.71
SSBP4-205ENST00000598159 S4R3F8 94 aa10.6□□□□□ -0.71
SSBP4-205ENST00000598159 CSAG1Q6PB30 78 aa10.58□□□□□ -0.72
SSBP4-205ENST00000598159 FAM236AA0A1B0GUQ0 79 aa10.54□□□□□ -0.72
SSBP4-205ENST00000598159 FAM236BA0A1B0GV22 79 aa10.54□□□□□ -0.72
SSBP4-205ENST00000598159 LCA10Q71F78 164 aa10.52□□□□□ -0.73
SSBP4-205ENST00000598159 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
SSBP4-205ENST00000598159 CYP4F30PQ9H0H9 118 aa10.47□□□□□ -0.73
SSBP4-205ENST00000598159 ACYP1P07311 99 aa10.46□□□□□ -0.73
SSBP4-205ENST00000598159 TRAV22A0A0B4J277 110 aa10.41□□□□□ -0.74
SSBP4-205ENST00000598159 LOC101927531A0A1B0GV80 90 aa10.38□□□□□ -0.75
SSBP4-205ENST00000598159 SPRR2GQ9BYE4 73 aa10.38□□□□□ -0.75
SSBP4-205ENST00000598159 FAM240AA0A1B0GVK7 77 aa10.37□□□□□ -0.75
SSBP4-205ENST00000598159 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
SSBP4-205ENST00000598159 ATP5EP2Q5VTU8 51 aa10.35□□□□□ -0.75
SSBP4-205ENST00000598159 Q5VV11 94 aa10.35□□□□□ -0.75
SSBP4-205ENST00000598159 KLKP1Q107X0 134 aa10.33□□□□□ -0.76
SSBP4-205ENST00000598159 KRTAP19-8Q3LI54 63 aa10.33□□□□□ -0.76
SSBP4-205ENST00000598159 KRTAP6-3Q3LI67 103 aa10.33□□□□□ -0.76
SSBP4-205ENST00000598159 MT1BP07438 61 aa10.32□□□□□ -0.76
SSBP4-205ENST00000598159 HIST1H4AP62805 103 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms