RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 A0A1B0GVX0 72 aa11.43□□□□□ -0.58
GTF2F1-204ENST00000594965 LOC110117498A0A087WWA1 95 aa11.42□□□□□ -0.58
GTF2F1-204ENST00000594965 C21orf62-AS1Q17RA5 79 aa11.42□□□□□ -0.58
GTF2F1-204ENST00000594965 KRTAP9-6A0A140TA67 174 aa11.41□□□□□ -0.58
GTF2F1-204ENST00000594965 C8orf87E5RJ46 101 aa11.39□□□□□ -0.59
GTF2F1-204ENST00000594965 LYRM7Q5U5X0 104 aa11.39□□□□□ -0.59
GTF2F1-204ENST00000594965 TRBV20-1A0A075B6N2 111 aa11.38□□□□□ -0.59
GTF2F1-204ENST00000594965 J3KT08 172 aa11.37□□□□□ -0.59
GTF2F1-204ENST00000594965 C14orf132Q9NPU4 83 aa11.37□□□□□ -0.59
GTF2F1-204ENST00000594965 A0A1B0GW54 56 aa11.35□□□□□ -0.59
GTF2F1-204ENST00000594965 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
GTF2F1-204ENST00000594965 TAX1BP3O14907 124 aa11.34□□□□□ -0.59
GTF2F1-204ENST00000594965 PDE6GP18545 87 aa11.34□□□□□ -0.59
GTF2F1-204ENST00000594965 A0A1W2PPM0 123 aa11.28□□□□□ -0.6
GTF2F1-204ENST00000594965 HRES1P13985 223 aa11.28□□□□□ -0.6
GTF2F1-204ENST00000594965 A8MWP4 228 aa11.27□□□□□ -0.61
GTF2F1-204ENST00000594965 NDUFB1O75438 58 aa11.26□□□□□ -0.61
GTF2F1-204ENST00000594965 MPLKIPQ8TAP9 179 aa11.26□□□□□ -0.61
GTF2F1-204ENST00000594965 IGKV3D-7A0A0C4DH55 119 aa11.25□□□□□ -0.61
GTF2F1-204ENST00000594965 H3BT86 120 aa11.25□□□□□ -0.61
GTF2F1-204ENST00000594965 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
GTF2F1-204ENST00000594965 Q8N9P0 234 aaPredicted RBP11.23□□□□□ -0.61
GTF2F1-204ENST00000594965 C8orf17Q9NRJ1 99 aa11.23□□□□□ -0.61
GTF2F1-204ENST00000594965 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
GTF2F1-204ENST00000594965 NREPQ16612 68 aa11.19□□□□□ -0.62
GTF2F1-204ENST00000594965 CRCT1Q9UGL9 99 aa11.19□□□□□ -0.62
GTF2F1-204ENST00000594965 FAM236DA0A1B0GTK5 79 aa11.16□□□□□ -0.62
GTF2F1-204ENST00000594965 FAM236CP0DP71 79 aa11.16□□□□□ -0.62
GTF2F1-204ENST00000594965 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
GTF2F1-204ENST00000594965 RBM12B-AS1Q9P1G2 102 aa11.15□□□□□ -0.62
GTF2F1-204ENST00000594965 FSIP2Q5CZC0 6907 aa11.14□□□□□ -0.63
GTF2F1-204ENST00000594965 KRTAP9-8Q9BYQ0 159 aa11.14□□□□□ -0.63
GTF2F1-204ENST00000594965 Q6ZVQ6 151 aa11.13□□□□□ -0.63
GTF2F1-204ENST00000594965 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
GTF2F1-204ENST00000594965 SPINK7P58062 85 aa11.11□□□□□ -0.63
GTF2F1-204ENST00000594965 MMP24-AS1A0A0U1RRL7 71 aa11.1□□□□□ -0.63
GTF2F1-204ENST00000594965 SMCPP49901 116 aaPredicted RBP11.09□□□□□ -0.63
GTF2F1-204ENST00000594965 K7EQZ3 153 aa11.07□□□□□ -0.64
GTF2F1-204ENST00000594965 TMEM254Q8TBM7 123 aa11.06□□□□□ -0.64
GTF2F1-204ENST00000594965 MRPL34Q9BQ48 92 aaKnown RBP11.04□□□□□ -0.64
GTF2F1-204ENST00000594965 COL5A1-AS1Q5SY13 56 aa11.02□□□□□ -0.65
GTF2F1-204ENST00000594965 PRO0461Q9UI25 63 aa11.01□□□□□ -0.65
GTF2F1-204ENST00000594965 hDV103S1A0JD37 113 aa11□□□□□ -0.65
GTF2F1-204ENST00000594965 BPY2O14599 106 aa11□□□□□ -0.65
GTF2F1-204ENST00000594965 MT2AP02795 61 aa10.97□□□□□ -0.65
GTF2F1-204ENST00000594965 K7EP34 96 aa10.95□□□□□ -0.66
GTF2F1-204ENST00000594965 WFDC13Q8IUB5 93 aa10.94□□□□□ -0.66
GTF2F1-204ENST00000594965 Q8N9L7 120 aa10.92□□□□□ -0.66
GTF2F1-204ENST00000594965 NDUFS5O43920 106 aa10.9□□□□□ -0.66
GTF2F1-204ENST00000594965 MT1FP04733 61 aa10.89□□□□□ -0.67
GTF2F1-204ENST00000594965 LINC00846Q9NV44 126 aa10.88□□□□□ -0.67
GTF2F1-204ENST00000594965 Q5W150 140 aa10.86□□□□□ -0.67
GTF2F1-204ENST00000594965 CASC2Q6XLA1 102 aa10.84□□□□□ -0.67
GTF2F1-204ENST00000594965 UBL5Q9BZL1 73 aa10.8□□□□□ -0.68
GTF2F1-204ENST00000594965 PCP4L1A6NKN8 68 aa10.79□□□□□ -0.68
GTF2F1-204ENST00000594965 HCG22E2RYF7 251 aa10.79□□□□□ -0.68
GTF2F1-204ENST00000594965 KRTAP10-10P60014 251 aa10.78□□□□□ -0.68
GTF2F1-204ENST00000594965 GTF2H5Q6ZYL4 71 aa10.78□□□□□ -0.68
GTF2F1-204ENST00000594965 KRTAP9-3Q9BYQ3 159 aa10.78□□□□□ -0.68
GTF2F1-204ENST00000594965 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
GTF2F1-204ENST00000594965 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
GTF2F1-204ENST00000594965 USH2AO75445 5202 aa10.74□□□□□ -0.69
GTF2F1-204ENST00000594965 F8W1H4 67 aa10.73□□□□□ -0.69
GTF2F1-204ENST00000594965 LCE2BO14633 110 aa10.73□□□□□ -0.69
GTF2F1-204ENST00000594965 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
GTF2F1-204ENST00000594965 H1FX-AS1Q4G0G2 97 aa10.71□□□□□ -0.69
GTF2F1-204ENST00000594965 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
GTF2F1-204ENST00000594965 CXCL6P80162 114 aa10.69□□□□□ -0.7
GTF2F1-204ENST00000594965 SSPOA2VEC9 5147 aa10.64□□□□□ -0.71
GTF2F1-204ENST00000594965 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
GTF2F1-204ENST00000594965 KRTAP19-1Q8IUB9 90 aa10.5□□□□□ -0.73
GTF2F1-204ENST00000594965 KRTAP3-1Q9BYR8 98 aa10.5□□□□□ -0.73
GTF2F1-204ENST00000594965 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
GTF2F1-204ENST00000594965 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.43□□□□□ -0.74
GTF2F1-204ENST00000594965 ACYP1P07311 99 aa10.43□□□□□ -0.74
GTF2F1-204ENST00000594965 C1orf64Q8NEQ6 169 aa10.4□□□□□ -0.74
GTF2F1-204ENST00000594965 FAM240AA0A1B0GVK7 77 aa10.39□□□□□ -0.75
GTF2F1-204ENST00000594965 FCGBPQ9Y6R7 5405 aaPredicted RBP10.36□□□□□ -0.75
GTF2F1-204ENST00000594965 C5orf47Q569G3 176 aa10.35□□□□□ -0.75
GTF2F1-204ENST00000594965 S4R3F8 94 aa10.33□□□□□ -0.76
GTF2F1-204ENST00000594965 KRTAP19-6Q3LI70 58 aa10.32□□□□□ -0.76
GTF2F1-204ENST00000594965 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
GTF2F1-204ENST00000594965 CYP4F30PQ9H0H9 118 aa10.32□□□□□ -0.76
GTF2F1-204ENST00000594965 LCA10Q71F78 164 aa10.3□□□□□ -0.76
GTF2F1-204ENST00000594965 TRAV22A0A0B4J277 110 aa10.28□□□□□ -0.76
GTF2F1-204ENST00000594965 KRTAP9-7A8MTY7 169 aa10.27□□□□□ -0.77
GTF2F1-204ENST00000594965 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
GTF2F1-204ENST00000594965 A0A1B0GV90 55 aa10.23□□□□□ -0.77
GTF2F1-204ENST00000594965 CSAG1Q6PB30 78 aa10.23□□□□□ -0.77
GTF2F1-204ENST00000594965 LOC101927531A0A1B0GV80 90 aa10.22□□□□□ -0.77
GTF2F1-204ENST00000594965 KRTAP3-3Q9BYR6 98 aa10.2□□□□□ -0.78
GTF2F1-204ENST00000594965 A0A087WVE0 104 aa10.19□□□□□ -0.78
GTF2F1-204ENST00000594965 LINC00643Q86TS7 51 aa10.19□□□□□ -0.78
GTF2F1-204ENST00000594965 UQCRQO14949 82 aa10.18□□□□□ -0.78
GTF2F1-204ENST00000594965 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
GTF2F1-204ENST00000594965 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
GTF2F1-204ENST00000594965 H0Y9P7 68 aa10.14□□□□□ -0.79
GTF2F1-204ENST00000594965 ATOX1O00244 68 aa10.1□□□□□ -0.79
GTF2F1-204ENST00000594965 SPRR2GQ9BYE4 73 aa10.05□□□□□ -0.8
GTF2F1-204ENST00000594965 MT1BP07438 61 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms