RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 FAT4Q6V0I7 4981 aa11.41□□□□□ -0.58
ATG4D-212ENST00000590096 Q75L30 129 aa11.41□□□□□ -0.58
ATG4D-212ENST00000590096 IGHV6-1A0A0B4J1U7 121 aa11.4□□□□□ -0.58
ATG4D-212ENST00000590096 NREPQ16612 68 aa11.39□□□□□ -0.59
ATG4D-212ENST00000590096 KRTAP4-1Q9BYQ7 146 aa11.39□□□□□ -0.59
ATG4D-212ENST00000590096 A0A1B0GVX0 72 aa11.37□□□□□ -0.59
ATG4D-212ENST00000590096 NDUFB1O75438 58 aa11.36□□□□□ -0.59
ATG4D-212ENST00000590096 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
ATG4D-212ENST00000590096 C20orf166-AS1Q96NR2 134 aa11.35□□□□□ -0.59
ATG4D-212ENST00000590096 C8orf87E5RJ46 101 aa11.34□□□□□ -0.59
ATG4D-212ENST00000590096 F8W1H4 67 aa11.34□□□□□ -0.59
ATG4D-212ENST00000590096 A8MUU9 505 aa11.33□□□□□ -0.6
ATG4D-212ENST00000590096 NOTCH2NLQ7Z3S9 236 aa11.32□□□□□ -0.6
ATG4D-212ENST00000590096 A8MWP4 228 aa11.3□□□□□ -0.6
ATG4D-212ENST00000590096 LCE2AQ5TA79 106 aaPredicted RBP11.3□□□□□ -0.6
ATG4D-212ENST00000590096 KRTAP9-2Q9BYQ4 174 aa11.3□□□□□ -0.6
ATG4D-212ENST00000590096 KRTAP16-1A8MUX0 517 aa11.29□□□□□ -0.6
ATG4D-212ENST00000590096 IGKV3D-7A0A0C4DH55 119 aa11.24□□□□□ -0.61
ATG4D-212ENST00000590096 ETDBQ3ZM63 59 aa11.24□□□□□ -0.61
ATG4D-212ENST00000590096 Q6ZVQ6 151 aa11.22□□□□□ -0.61
ATG4D-212ENST00000590096 BPY2O14599 106 aa11.21□□□□□ -0.61
ATG4D-212ENST00000590096 PRR15Q8IV56 129 aa11.21□□□□□ -0.61
ATG4D-212ENST00000590096 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.61
ATG4D-212ENST00000590096 UBL5Q9BZL1 73 aa11.18□□□□□ -0.62
ATG4D-212ENST00000590096 LINC00846Q9NV44 126 aa11.16□□□□□ -0.62
ATG4D-212ENST00000590096 K7EQZ3 153 aa11.14□□□□□ -0.63
ATG4D-212ENST00000590096 A0A1B0GV90 55 aa11.1□□□□□ -0.63
ATG4D-212ENST00000590096 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
ATG4D-212ENST00000590096 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
ATG4D-212ENST00000590096 TMEM254Q8TBM7 123 aa11.07□□□□□ -0.64
ATG4D-212ENST00000590096 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
ATG4D-212ENST00000590096 Q8N9L7 120 aa11.05□□□□□ -0.64
ATG4D-212ENST00000590096 MRPL34Q9BQ48 92 aaKnown RBP11.05□□□□□ -0.64
ATG4D-212ENST00000590096 KRTAP19-2Q3LHN2 52 aa11.04□□□□□ -0.64
ATG4D-212ENST00000590096 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
ATG4D-212ENST00000590096 KRTAP9-6A0A140TA67 174 aa11.03□□□□□ -0.64
ATG4D-212ENST00000590096 COX6B2Q6YFQ2 88 aa11.03□□□□□ -0.64
ATG4D-212ENST00000590096 LCE2CQ5TA81 110 aa11.01□□□□□ -0.65
ATG4D-212ENST00000590096 ACYP1P07311 99 aa10.99□□□□□ -0.65
ATG4D-212ENST00000590096 NDUFS5O43920 106 aa10.98□□□□□ -0.65
ATG4D-212ENST00000590096 WFDC13Q8IUB5 93 aa10.98□□□□□ -0.65
ATG4D-212ENST00000590096 CASC2Q6XLA1 102 aa10.96□□□□□ -0.65
ATG4D-212ENST00000590096 CXCL6P80162 114 aa10.95□□□□□ -0.66
ATG4D-212ENST00000590096 FAM240AA0A1B0GVK7 77 aa10.94□□□□□ -0.66
ATG4D-212ENST00000590096 HCG22E2RYF7 251 aa10.91□□□□□ -0.66
ATG4D-212ENST00000590096 MT1HP80294 61 aa10.89□□□□□ -0.67
ATG4D-212ENST00000590096 SPINK7P58062 85 aa10.87□□□□□ -0.67
ATG4D-212ENST00000590096 RBM12B-AS1Q9P1G2 102 aa10.85□□□□□ -0.67
ATG4D-212ENST00000590096 HRES1P13985 223 aa10.84□□□□□ -0.67
ATG4D-212ENST00000590096 FAM236DA0A1B0GTK5 79 aa10.82□□□□□ -0.68
ATG4D-212ENST00000590096 FAM236CP0DP71 79 aa10.82□□□□□ -0.68
ATG4D-212ENST00000590096 ATP5EP2Q5VTU8 51 aa10.82□□□□□ -0.68
ATG4D-212ENST00000590096 FLGP20930 4061 aaPredicted RBP10.8□□□□□ -0.68
ATG4D-212ENST00000590096 M0R2T5 61 aa10.79□□□□□ -0.68
ATG4D-212ENST00000590096 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
ATG4D-212ENST00000590096 MPLKIPQ8TAP9 179 aa10.78□□□□□ -0.68
ATG4D-212ENST00000590096 FSIP2Q5CZC0 6907 aa10.77□□□□□ -0.68
ATG4D-212ENST00000590096 J3QR89 54 aa10.76□□□□□ -0.69
ATG4D-212ENST00000590096 Q5W150 140 aa10.76□□□□□ -0.69
ATG4D-212ENST00000590096 LINC00643Q86TS7 51 aa10.73□□□□□ -0.69
ATG4D-212ENST00000590096 HIST1H4AP62805 103 aaKnown RBP10.71□□□□□ -0.69
ATG4D-212ENST00000590096 IGKV2D-30A0A075B6S6 120 aa10.7□□□□□ -0.7
ATG4D-212ENST00000590096 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
ATG4D-212ENST00000590096 C7orf65Q6ZTY9 151 aa10.69□□□□□ -0.7
ATG4D-212ENST00000590096 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
ATG4D-212ENST00000590096 KRTAP10-6P60371 365 aaPredicted RBP10.63□□□□□ -0.71
ATG4D-212ENST00000590096 CRCT1Q9UGL9 99 aa10.63□□□□□ -0.71
ATG4D-212ENST00000590096 LORP23490 312 aaPredicted RBP10.59□□□□□ -0.71
ATG4D-212ENST00000590096 A0A087WVE0 104 aa10.57□□□□□ -0.72
ATG4D-212ENST00000590096 TRAV22A0A0B4J277 110 aa10.49□□□□□ -0.73
ATG4D-212ENST00000590096 K7ERU9 68 aa10.49□□□□□ -0.73
ATG4D-212ENST00000590096 UQCRQO14949 82 aa10.47□□□□□ -0.73
ATG4D-212ENST00000590096 C4orf26Q17RF5 130 aa10.45□□□□□ -0.74
ATG4D-212ENST00000590096 H1FX-AS1Q4G0G2 97 aa10.45□□□□□ -0.74
ATG4D-212ENST00000590096 LOC101927531A0A1B0GV80 90 aa10.4□□□□□ -0.74
ATG4D-212ENST00000590096 H0Y9P7 68 aa10.39□□□□□ -0.75
ATG4D-212ENST00000590096 ATOX1O00244 68 aa10.39□□□□□ -0.75
ATG4D-212ENST00000590096 CYP4F30PQ9H0H9 118 aa10.39□□□□□ -0.75
ATG4D-212ENST00000590096 C1orf64Q8NEQ6 169 aa10.33□□□□□ -0.76
ATG4D-212ENST00000590096 KRTAP9-8Q9BYQ0 159 aa10.33□□□□□ -0.76
ATG4D-212ENST00000590096 OCR1Q9BZK8 76 aa10.33□□□□□ -0.76
ATG4D-212ENST00000590096 SCGB1A1P11684 91 aa10.32□□□□□ -0.76
ATG4D-212ENST00000590096 IMUPQ9GZP8 106 aa10.32□□□□□ -0.76
ATG4D-212ENST00000590096 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
ATG4D-212ENST00000590096 MP68P56378 58 aa10.29□□□□□ -0.76
ATG4D-212ENST00000590096 KRTAP3-1Q9BYR8 98 aa10.27□□□□□ -0.77
ATG4D-212ENST00000590096 LINC00208Q96KT6 92 aa10.26□□□□□ -0.77
ATG4D-212ENST00000590096 MT2AP02795 61 aa10.25□□□□□ -0.77
ATG4D-212ENST00000590096 C5orf47Q569G3 176 aa10.24□□□□□ -0.77
ATG4D-212ENST00000590096 S4R3F8 94 aa10.2□□□□□ -0.78
ATG4D-212ENST00000590096 KRTAP10-10P60014 251 aa10.17□□□□□ -0.78
ATG4D-212ENST00000590096 H3BPC8 53 aa10.16□□□□□ -0.78
ATG4D-212ENST00000590096 MT1FP04733 61 aa10.16□□□□□ -0.78
ATG4D-212ENST00000590096 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
ATG4D-212ENST00000590096 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
ATG4D-212ENST00000590096 KLKP1Q107X0 134 aa10.11□□□□□ -0.79
ATG4D-212ENST00000590096 SMIM20Q8N5G0 67 aa10.11□□□□□ -0.79
ATG4D-212ENST00000590096 LCA10Q71F78 164 aa10.1□□□□□ -0.79
ATG4D-212ENST00000590096 CSAG1Q6PB30 78 aa10.07□□□□□ -0.8
ATG4D-212ENST00000590096 TRAV7A0A075B6U4 112 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms