RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
HDAC5-208ENST00000588419 H3BQ85 93 aa6.74□□□□□ -1.33
HDAC5-208ENST00000588419 A0A1B0GVX0 72 aa6.73□□□□□ -1.33
HDAC5-208ENST00000588419 C8orf87E5RJ46 101 aa6.73□□□□□ -1.33
HDAC5-208ENST00000588419 COX6CP09669 75 aa6.73□□□□□ -1.33
HDAC5-208ENST00000588419 HSD52Q0P140 79 aa6.71□□□□□ -1.34
HDAC5-208ENST00000588419 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
HDAC5-208ENST00000588419 UBE2V1Q13404 147 aa6.69□□□□□ -1.34
HDAC5-208ENST00000588419 SPINK7P58062 85 aa6.68□□□□□ -1.34
HDAC5-208ENST00000588419 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
HDAC5-208ENST00000588419 RBM3P98179 157 aaKnown RBP6.67□□□□□ -1.34
HDAC5-208ENST00000588419 LYRM7Q5U5X0 104 aa6.67□□□□□ -1.34
HDAC5-208ENST00000588419 SCGB1C2P0DMR2 95 aa6.66□□□□□ -1.34
HDAC5-208ENST00000588419 WFDC13Q8IUB5 93 aa6.65□□□□□ -1.34
HDAC5-208ENST00000588419 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
HDAC5-208ENST00000588419 J3KT08 172 aa6.63□□□□□ -1.35
HDAC5-208ENST00000588419 LINC00846Q9NV44 126 aa6.63□□□□□ -1.35
HDAC5-208ENST00000588419 C9JAW5 83 aa6.62□□□□□ -1.35
HDAC5-208ENST00000588419 NDUFB1O75438 58 aa6.62□□□□□ -1.35
HDAC5-208ENST00000588419 A8MWP4 228 aa6.6□□□□□ -1.35
HDAC5-208ENST00000588419 PYY3Q5JQD4 70 aa6.6□□□□□ -1.35
HDAC5-208ENST00000588419 BAALC-AS2P0C853 105 aa6.59□□□□□ -1.35
HDAC5-208ENST00000588419 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
HDAC5-208ENST00000588419 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
HDAC5-208ENST00000588419 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.36
HDAC5-208ENST00000588419 Q6ZQT0 140 aa6.58□□□□□ -1.36
HDAC5-208ENST00000588419 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
HDAC5-208ENST00000588419 UQCR10Q9UDW1 63 aa6.57□□□□□ -1.36
HDAC5-208ENST00000588419 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
HDAC5-208ENST00000588419 KRTAP19-6Q3LI70 58 aa6.56□□□□□ -1.36
HDAC5-208ENST00000588419 Q6ZVQ6 151 aa6.54□□□□□ -1.36
HDAC5-208ENST00000588419 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
HDAC5-208ENST00000588419 IGKV3D-7A0A0C4DH55 119 aa6.53□□□□□ -1.36
HDAC5-208ENST00000588419 NAA38Q9BRA0 125 aaKnown RBP6.52□□□□□ -1.37
HDAC5-208ENST00000588419 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
HDAC5-208ENST00000588419 NDUFS5O43920 106 aa6.5□□□□□ -1.37
HDAC5-208ENST00000588419 ATXN8Q156A1 80 aa6.5□□□□□ -1.37
HDAC5-208ENST00000588419 C14orf132Q9NPU4 83 aa6.49□□□□□ -1.37
HDAC5-208ENST00000588419 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
HDAC5-208ENST00000588419 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
HDAC5-208ENST00000588419 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
HDAC5-208ENST00000588419 NREPQ16612 68 aa6.46□□□□□ -1.38
HDAC5-208ENST00000588419 H1FX-AS1Q4G0G2 97 aa6.46□□□□□ -1.38
HDAC5-208ENST00000588419 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
HDAC5-208ENST00000588419 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
HDAC5-208ENST00000588419 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
HDAC5-208ENST00000588419 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
HDAC5-208ENST00000588419 A0A1B0GW54 56 aa6.43□□□□□ -1.38
HDAC5-208ENST00000588419 PDE6GP18545 87 aa6.43□□□□□ -1.38
HDAC5-208ENST00000588419 hDV103S1A0JD37 113 aa6.42□□□□□ -1.38
HDAC5-208ENST00000588419 K7EQZ3 153 aa6.41□□□□□ -1.38
HDAC5-208ENST00000588419 M0R143 59 aa6.4□□□□□ -1.38
HDAC5-208ENST00000588419 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
HDAC5-208ENST00000588419 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
HDAC5-208ENST00000588419 FAM236AA0A1B0GUQ0 79 aa6.34□□□□□ -1.39
HDAC5-208ENST00000588419 FAM236BA0A1B0GV22 79 aa6.34□□□□□ -1.39
HDAC5-208ENST00000588419 SMIM6P0DI80 62 aa6.34□□□□□ -1.39
HDAC5-208ENST00000588419 BPY2O14599 106 aa6.33□□□□□ -1.4
HDAC5-208ENST00000588419 Q5W150 140 aa6.33□□□□□ -1.4
HDAC5-208ENST00000588419 C4orf26Q17RF5 130 aa6.32□□□□□ -1.4
HDAC5-208ENST00000588419 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
HDAC5-208ENST00000588419 BATFQ16520 125 aa6.31□□□□□ -1.4
HDAC5-208ENST00000588419 C5orf47Q569G3 176 aa6.31□□□□□ -1.4
HDAC5-208ENST00000588419 Q8N9L7 120 aa6.3□□□□□ -1.4
HDAC5-208ENST00000588419 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
HDAC5-208ENST00000588419 TSTD3H0UI37 97 aa6.28□□□□□ -1.4
HDAC5-208ENST00000588419 A6NN06 94 aa6.26□□□□□ -1.41
HDAC5-208ENST00000588419 H3BT86 120 aa6.25□□□□□ -1.41
HDAC5-208ENST00000588419 S4R3F8 94 aa6.23□□□□□ -1.41
HDAC5-208ENST00000588419 Q5VV11 94 aa6.22□□□□□ -1.41
HDAC5-208ENST00000588419 CXCL6P80162 114 aa6.21□□□□□ -1.42
HDAC5-208ENST00000588419 NEBP20929 6669 aa6.2□□□□□ -1.42
HDAC5-208ENST00000588419 MT1BP07438 61 aa6.19□□□□□ -1.42
HDAC5-208ENST00000588419 C9orf118A6NHY6 69 aa6.18□□□□□ -1.42
HDAC5-208ENST00000588419 A0A1W2PPM0 123 aa6.17□□□□□ -1.42
HDAC5-208ENST00000588419 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
HDAC5-208ENST00000588419 LCA10Q71F78 164 aa6.16□□□□□ -1.42
HDAC5-208ENST00000588419 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
HDAC5-208ENST00000588419 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.42
HDAC5-208ENST00000588419 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.43
HDAC5-208ENST00000588419 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
HDAC5-208ENST00000588419 PCP4L1A6NKN8 68 aa6.11□□□□□ -1.43
HDAC5-208ENST00000588419 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
HDAC5-208ENST00000588419 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
HDAC5-208ENST00000588419 UBL5Q9BZL1 73 aa6.11□□□□□ -1.43
HDAC5-208ENST00000588419 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
HDAC5-208ENST00000588419 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
HDAC5-208ENST00000588419 KLKP1Q107X0 134 aa6.09□□□□□ -1.43
HDAC5-208ENST00000588419 IMUPQ9GZP8 106 aa6.09□□□□□ -1.43
HDAC5-208ENST00000588419 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
HDAC5-208ENST00000588419 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
HDAC5-208ENST00000588419 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
HDAC5-208ENST00000588419 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
HDAC5-208ENST00000588419 A0A087WVE0 104 aa5.98□□□□□ -1.45
HDAC5-208ENST00000588419 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
HDAC5-208ENST00000588419 PRO0461Q9UI25 63 aa5.95□□□□□ -1.46
HDAC5-208ENST00000588419 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
HDAC5-208ENST00000588419 CRIPTQ9P021 101 aa5.94□□□□□ -1.46
HDAC5-208ENST00000588419 K7EP34 96 aa5.93□□□□□ -1.46
HDAC5-208ENST00000588419 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms