RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 KRTAP10-10P60014 251 aa9.57□□□□□ -0.88
TRAF4-216ENST00000586813 ORMDL1Q9P0S3 153 aa9.57□□□□□ -0.88
TRAF4-216ENST00000586813 SCGB1C2P0DMR2 95 aa9.56□□□□□ -0.88
TRAF4-216ENST00000586813 IGHV6-1A0A0B4J1U7 121 aa9.55□□□□□ -0.88
TRAF4-216ENST00000586813 TSTD3H0UI37 97 aa9.54□□□□□ -0.88
TRAF4-216ENST00000586813 H3BQ85 93 aa9.53□□□□□ -0.88
TRAF4-216ENST00000586813 TRACP01848 142 aa9.53□□□□□ -0.88
TRAF4-216ENST00000586813 CCKP06307 115 aa9.53□□□□□ -0.88
TRAF4-216ENST00000586813 TMEM256-PLSCR3K7ERE1 68 aa9.51□□□□□ -0.89
TRAF4-216ENST00000586813 C8orf87E5RJ46 101 aa9.48□□□□□ -0.89
TRAF4-216ENST00000586813 MACF1Q9UPN3 7388 aaKnown RBP9.48□□□□□ -0.89
TRAF4-216ENST00000586813 LOC105371267A0A1B0GV96 52 aa9.47□□□□□ -0.89
TRAF4-216ENST00000586813 A0A1B0GVX0 72 aa9.47□□□□□ -0.89
TRAF4-216ENST00000586813 SYNE2Q8WXH0 6885 aaKnown RBP9.46□□□□□ -0.9
TRAF4-216ENST00000586813 MTURNQ8N3F0 131 aa9.46□□□□□ -0.9
TRAF4-216ENST00000586813 UBE2V1Q13404 147 aa9.45□□□□□ -0.9
TRAF4-216ENST00000586813 BATFQ16520 125 aa9.43□□□□□ -0.9
TRAF4-216ENST00000586813 ZCCHC13Q8WW36 166 aaKnown RBP9.43□□□□□ -0.9
TRAF4-216ENST00000586813 VPS25Q9BRG1 176 aa9.43□□□□□ -0.9
TRAF4-216ENST00000586813 SPINK7P58062 85 aa9.41□□□□□ -0.9
TRAF4-216ENST00000586813 NAA38Q9BRA0 125 aaKnown RBP9.39□□□□□ -0.91
TRAF4-216ENST00000586813 ATXN8Q156A1 80 aa9.38□□□□□ -0.91
TRAF4-216ENST00000586813 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
TRAF4-216ENST00000586813 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
TRAF4-216ENST00000586813 J3KT08 172 aa9.36□□□□□ -0.91
TRAF4-216ENST00000586813 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
TRAF4-216ENST00000586813 BAALC-AS2P0C853 105 aa9.34□□□□□ -0.91
TRAF4-216ENST00000586813 KRTAP19-6Q3LI70 58 aa9.33□□□□□ -0.92
TRAF4-216ENST00000586813 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
TRAF4-216ENST00000586813 LINC00846Q9NV44 126 aa9.33□□□□□ -0.92
TRAF4-216ENST00000586813 A8MWP4 228 aa9.31□□□□□ -0.92
TRAF4-216ENST00000586813 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
TRAF4-216ENST00000586813 WFDC13Q8IUB5 93 aa9.31□□□□□ -0.92
TRAF4-216ENST00000586813 Q6ZQT0 140 aa9.29□□□□□ -0.92
TRAF4-216ENST00000586813 C9JAW5 83 aa9.28□□□□□ -0.92
TRAF4-216ENST00000586813 NDUFB1O75438 58 aa9.28□□□□□ -0.92
TRAF4-216ENST00000586813 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
TRAF4-216ENST00000586813 JMJD7-PLA2G4BH0Y9G9 81 aa9.24□□□□□ -0.93
TRAF4-216ENST00000586813 C9orf118A6NHY6 69 aa9.23□□□□□ -0.93
TRAF4-216ENST00000586813 IGKV3D-7A0A0C4DH55 119 aa9.19□□□□□ -0.94
TRAF4-216ENST00000586813 A0A1W2PPM0 123 aa9.19□□□□□ -0.94
TRAF4-216ENST00000586813 TAX1BP3O14907 124 aa9.19□□□□□ -0.94
TRAF4-216ENST00000586813 Q6ZVQ6 151 aa9.17□□□□□ -0.94
TRAF4-216ENST00000586813 A0A1B0GW54 56 aa9.16□□□□□ -0.94
TRAF4-216ENST00000586813 PDE6GP18545 87 aa9.16□□□□□ -0.94
TRAF4-216ENST00000586813 LOC110117498A0A087WWA1 95 aa9.15□□□□□ -0.94
TRAF4-216ENST00000586813 C14orf132Q9NPU4 83 aa9.14□□□□□ -0.95
TRAF4-216ENST00000586813 COL5A1-AS1Q5SY13 56 aa9.13□□□□□ -0.95
TRAF4-216ENST00000586813 H3BT86 120 aa9.12□□□□□ -0.95
TRAF4-216ENST00000586813 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
TRAF4-216ENST00000586813 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
TRAF4-216ENST00000586813 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
TRAF4-216ENST00000586813 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
TRAF4-216ENST00000586813 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
TRAF4-216ENST00000586813 PCP4L1A6NKN8 68 aa9.07□□□□□ -0.96
TRAF4-216ENST00000586813 KRTAP6-3Q3LI67 103 aa9.07□□□□□ -0.96
TRAF4-216ENST00000586813 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
TRAF4-216ENST00000586813 NREPQ16612 68 aa9.04□□□□□ -0.96
TRAF4-216ENST00000586813 hDV103S1A0JD37 113 aa9□□□□□ -0.97
TRAF4-216ENST00000586813 NDUFS5O43920 106 aa9□□□□□ -0.97
TRAF4-216ENST00000586813 K7EQZ3 153 aa8.99□□□□□ -0.97
TRAF4-216ENST00000586813 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
TRAF4-216ENST00000586813 K7EP34 96 aa8.97□□□□□ -0.97
TRAF4-216ENST00000586813 IGKV2-30P06310 120 aa8.97□□□□□ -0.97
TRAF4-216ENST00000586813 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
TRAF4-216ENST00000586813 GTF2H5Q6ZYL4 71 aa8.95□□□□□ -0.98
TRAF4-216ENST00000586813 Q5W150 140 aa8.92□□□□□ -0.98
TRAF4-216ENST00000586813 NEBP20929 6669 aa8.9□□□□□ -0.98
TRAF4-216ENST00000586813 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.98
TRAF4-216ENST00000586813 BPY2O14599 106 aa8.87□□□□□ -0.99
TRAF4-216ENST00000586813 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
TRAF4-216ENST00000586813 C4orf26Q17RF5 130 aa8.85□□□□□ -0.99
TRAF4-216ENST00000586813 F8W1H4 67 aa8.82□□□□□ -1
TRAF4-216ENST00000586813 UBL5Q9BZL1 73 aa8.81□□□□□ -1
TRAF4-216ENST00000586813 HCG22E2RYF7 251 aa8.8□□□□□ -1
TRAF4-216ENST00000586813 C5orf47Q569G3 176 aa8.8□□□□□ -1
TRAF4-216ENST00000586813 CASC2Q6XLA1 102 aa8.8□□□□□ -1
TRAF4-216ENST00000586813 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
TRAF4-216ENST00000586813 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
TRAF4-216ENST00000586813 A6NN06 94 aa8.79□□□□□ -1
TRAF4-216ENST00000586813 Q8N9L7 120 aa8.79□□□□□ -1
TRAF4-216ENST00000586813 MUC12Q9UKN1 5478 aa8.78□□□□□ -1
TRAF4-216ENST00000586813 MT1BP07438 61 aa8.77□□□□□ -1.01
TRAF4-216ENST00000586813 ETDBQ3ZM63 59 aa8.75□□□□□ -1.01
TRAF4-216ENST00000586813 CXCL6P80162 114 aa8.74□□□□□ -1.01
TRAF4-216ENST00000586813 Q5VV11 94 aa8.74□□□□□ -1.01
TRAF4-216ENST00000586813 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.02
TRAF4-216ENST00000586813 KRTAP3-1Q9BYR8 98 aa8.71□□□□□ -1.02
TRAF4-216ENST00000586813 S4R3F8 94 aa8.71□□□□□ -1.02
TRAF4-216ENST00000586813 KRTAP19-8Q3LI54 63 aa8.7□□□□□ -1.02
TRAF4-216ENST00000586813 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
TRAF4-216ENST00000586813 LCA10Q71F78 164 aa8.65□□□□□ -1.02
TRAF4-216ENST00000586813 KRTAP10-5P60370 271 aa8.64□□□□□ -1.03
TRAF4-216ENST00000586813 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
TRAF4-216ENST00000586813 ACYP1P07311 99 aa8.58□□□□□ -1.04
TRAF4-216ENST00000586813 KLKP1Q107X0 134 aa8.58□□□□□ -1.04
TRAF4-216ENST00000586813 KRTAP20-1Q3LI63 56 aa8.55□□□□□ -1.04
TRAF4-216ENST00000586813 KRTAP5-9P26371 169 aa8.54□□□□□ -1.04
TRAF4-216ENST00000586813 A0A1B0GV90 55 aa8.52□□□□□ -1.05
TRAF4-216ENST00000586813 FAM240AA0A1B0GVK7 77 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms