RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 KRTAP16-1A8MUX0 517 aa13.01□□□□□ -0.33
TTC39C-209ENST00000584250 C14orf132Q9NPU4 83 aa13.01□□□□□ -0.33
TTC39C-209ENST00000584250 LOC110117498A0A087WWA1 95 aa12.99□□□□□ -0.33
TTC39C-209ENST00000584250 LINC00313P59037 77 aa12.99□□□□□ -0.33
TTC39C-209ENST00000584250 SMCPP49901 116 aaPredicted RBP12.98□□□□□ -0.33
TTC39C-209ENST00000584250 IGHV6-1A0A0B4J1U7 121 aa12.97□□□□□ -0.33
TTC39C-209ENST00000584250 PRO0461Q9UI25 63 aa12.97□□□□□ -0.33
TTC39C-209ENST00000584250 MT1HP80294 61 aa12.95□□□□□ -0.34
TTC39C-209ENST00000584250 PDE6GP18545 87 aa12.93□□□□□ -0.34
TTC39C-209ENST00000584250 KRTAP9-2Q9BYQ4 174 aa12.91□□□□□ -0.34
TTC39C-209ENST00000584250 A0A1B0GVX0 72 aa12.9□□□□□ -0.34
TTC39C-209ENST00000584250 F8W1H4 67 aa12.86□□□□□ -0.35
TTC39C-209ENST00000584250 C21orf62-AS1Q17RA5 79 aa12.86□□□□□ -0.35
TTC39C-209ENST00000584250 J3KT08 172 aa12.83□□□□□ -0.36
TTC39C-209ENST00000584250 A0A1B0GW54 56 aa12.82□□□□□ -0.36
TTC39C-209ENST00000584250 COX6B2Q6YFQ2 88 aa12.82□□□□□ -0.36
TTC39C-209ENST00000584250 C8orf87E5RJ46 101 aa12.81□□□□□ -0.36
TTC39C-209ENST00000584250 A0A1B0GV90 55 aa12.8□□□□□ -0.36
TTC39C-209ENST00000584250 IGKV3D-7A0A0C4DH55 119 aa12.76□□□□□ -0.37
TTC39C-209ENST00000584250 A8MWP4 228 aa12.75□□□□□ -0.37
TTC39C-209ENST00000584250 ETDBQ3ZM63 59 aa12.74□□□□□ -0.37
TTC39C-209ENST00000584250 NREPQ16612 68 aa12.73□□□□□ -0.37
TTC39C-209ENST00000584250 FLGP20930 4061 aaPredicted RBP12.73□□□□□ -0.37
TTC39C-209ENST00000584250 NDUFB1O75438 58 aa12.72□□□□□ -0.37
TTC39C-209ENST00000584250 C8orf17Q9NRJ1 99 aa12.71□□□□□ -0.37
TTC39C-209ENST00000584250 KRTAP10-6P60371 365 aaPredicted RBP12.65□□□□□ -0.38
TTC39C-209ENST00000584250 PRR15Q8IV56 129 aa12.65□□□□□ -0.38
TTC39C-209ENST00000584250 M0R2T5 61 aa12.64□□□□□ -0.39
TTC39C-209ENST00000584250 LORP23490 312 aaPredicted RBP12.64□□□□□ -0.39
TTC39C-209ENST00000584250 Q8N9P0 234 aaPredicted RBP12.64□□□□□ -0.39
TTC39C-209ENST00000584250 ZCCHC13Q8WW36 166 aaKnown RBP12.61□□□□□ -0.39
TTC39C-209ENST00000584250 HRES1P13985 223 aa12.6□□□□□ -0.39
TTC39C-209ENST00000584250 K7EQZ3 153 aa12.59□□□□□ -0.39
TTC39C-209ENST00000584250 MMP24-AS1A0A0U1RRL7 71 aa12.58□□□□□ -0.4
TTC39C-209ENST00000584250 Q6ZVQ6 151 aa12.58□□□□□ -0.4
TTC39C-209ENST00000584250 MPLKIPQ8TAP9 179 aa12.55□□□□□ -0.4
TTC39C-209ENST00000584250 LINC00846Q9NV44 126 aa12.55□□□□□ -0.4
TTC39C-209ENST00000584250 BPY2O14599 106 aa12.52□□□□□ -0.41
TTC39C-209ENST00000584250 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
TTC39C-209ENST00000584250 KRTAP9-6A0A140TA67 174 aa12.5□□□□□ -0.41
TTC39C-209ENST00000584250 Q8N9L7 120 aa12.5□□□□□ -0.41
TTC39C-209ENST00000584250 UBL5Q9BZL1 73 aa12.5□□□□□ -0.41
TTC39C-209ENST00000584250 TMEM254Q8TBM7 123 aa12.49□□□□□ -0.41
TTC39C-209ENST00000584250 SPINK7P58062 85 aa12.48□□□□□ -0.41
TTC39C-209ENST00000584250 MRPL34Q9BQ48 92 aaKnown RBP12.48□□□□□ -0.41
TTC39C-209ENST00000584250 FAM236DA0A1B0GTK5 79 aa12.45□□□□□ -0.42
TTC39C-209ENST00000584250 hDV103S1A0JD37 113 aa12.45□□□□□ -0.42
TTC39C-209ENST00000584250 FAM236CP0DP71 79 aa12.45□□□□□ -0.42
TTC39C-209ENST00000584250 RBM12B-AS1Q9P1G2 102 aa12.41□□□□□ -0.42
TTC39C-209ENST00000584250 ACYP1P07311 99 aa12.4□□□□□ -0.42
TTC39C-209ENST00000584250 WFDC13Q8IUB5 93 aa12.39□□□□□ -0.43
TTC39C-209ENST00000584250 FAM240AA0A1B0GVK7 77 aa12.36□□□□□ -0.43
TTC39C-209ENST00000584250 NDUFS5O43920 106 aa12.36□□□□□ -0.43
TTC39C-209ENST00000584250 Q5W150 140 aa12.31□□□□□ -0.44
TTC39C-209ENST00000584250 CASC2Q6XLA1 102 aa12.31□□□□□ -0.44
TTC39C-209ENST00000584250 KRTAP9-8Q9BYQ0 159 aa12.3□□□□□ -0.44
TTC39C-209ENST00000584250 CXCL6P80162 114 aa12.26□□□□□ -0.45
TTC39C-209ENST00000584250 HCG22E2RYF7 251 aa12.25□□□□□ -0.45
TTC39C-209ENST00000584250 J3QR89 54 aa12.24□□□□□ -0.45
TTC39C-209ENST00000584250 FSIP2Q5CZC0 6907 aa12.19□□□□□ -0.46
TTC39C-209ENST00000584250 IGKV2D-30A0A075B6S6 120 aa12.17□□□□□ -0.46
TTC39C-209ENST00000584250 IGKV2-30P06310 120 aa12.17□□□□□ -0.46
TTC39C-209ENST00000584250 CRCT1Q9UGL9 99 aa12.17□□□□□ -0.46
TTC39C-209ENST00000584250 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.46
TTC39C-209ENST00000584250 MT2AP02795 61 aa12.14□□□□□ -0.47
TTC39C-209ENST00000584250 LINC00643Q86TS7 51 aa12.14□□□□□ -0.47
TTC39C-209ENST00000584250 C7orf65Q6ZTY9 151 aa12.09□□□□□ -0.47
TTC39C-209ENST00000584250 MT1FP04733 61 aa12.06□□□□□ -0.48
TTC39C-209ENST00000584250 K7ERU9 68 aa12.04□□□□□ -0.48
TTC39C-209ENST00000584250 HIST1H4AP62805 103 aaKnown RBP12.04□□□□□ -0.48
TTC39C-209ENST00000584250 H1FX-AS1Q4G0G2 97 aa11.98□□□□□ -0.49
TTC39C-209ENST00000584250 C4orf26Q17RF5 130 aa11.97□□□□□ -0.49
TTC39C-209ENST00000584250 KRTAP10-10P60014 251 aa11.94□□□□□ -0.5
TTC39C-209ENST00000584250 A0A087WVE0 104 aa11.93□□□□□ -0.5
TTC39C-209ENST00000584250 KRTAP9-3Q9BYQ3 159 aa11.9□□□□□ -0.5
TTC39C-209ENST00000584250 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
TTC39C-209ENST00000584250 KRTAP3-1Q9BYR8 98 aa11.85□□□□□ -0.51
TTC39C-209ENST00000584250 LCE2BO14633 110 aa11.83□□□□□ -0.52
TTC39C-209ENST00000584250 USH2AO75445 5202 aa11.81□□□□□ -0.52
TTC39C-209ENST00000584250 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
TTC39C-209ENST00000584250 C1orf64Q8NEQ6 169 aa11.73□□□□□ -0.53
TTC39C-209ENST00000584250 IMUPQ9GZP8 106 aa11.73□□□□□ -0.53
TTC39C-209ENST00000584250 CYP4F30PQ9H0H9 118 aa11.72□□□□□ -0.53
TTC39C-209ENST00000584250 TRAV22A0A0B4J277 110 aa11.71□□□□□ -0.53
TTC39C-209ENST00000584250 UQCRQO14949 82 aa11.7□□□□□ -0.54
TTC39C-209ENST00000584250 SSPOA2VEC9 5147 aa11.67□□□□□ -0.54
TTC39C-209ENST00000584250 C5orf47Q569G3 176 aa11.64□□□□□ -0.55
TTC39C-209ENST00000584250 SCGB1A1P11684 91 aa11.63□□□□□ -0.55
TTC39C-209ENST00000584250 OCR1Q9BZK8 76 aa11.63□□□□□ -0.55
TTC39C-209ENST00000584250 S4R3F8 94 aa11.61□□□□□ -0.55
TTC39C-209ENST00000584250 LOC101927531A0A1B0GV80 90 aa11.6□□□□□ -0.55
TTC39C-209ENST00000584250 H0Y9P7 68 aa11.6□□□□□ -0.55
TTC39C-209ENST00000584250 LCA10Q71F78 164 aa11.59□□□□□ -0.55
TTC39C-209ENST00000584250 ATOX1O00244 68 aa11.56□□□□□ -0.56
TTC39C-209ENST00000584250 FAM236AA0A1B0GUQ0 79 aa11.53□□□□□ -0.56
TTC39C-209ENST00000584250 FAM236BA0A1B0GV22 79 aa11.53□□□□□ -0.56
TTC39C-209ENST00000584250 KRTAP19-1Q8IUB9 90 aa11.51□□□□□ -0.57
TTC39C-209ENST00000584250 MP68P56378 58 aa11.49□□□□□ -0.57
TTC39C-209ENST00000584250 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
TTC39C-209ENST00000584250 CSAG1Q6PB30 78 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms