RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 LINC00472Q9H8W2 130 aa5.95□□□□□ -1.46
SS18-219ENST00000581570 A6NN06 94 aa5.94□□□□□ -1.46
SS18-219ENST00000581570 SNRPEP62304 92 aaKnown RBP5.94□□□□□ -1.46
SS18-219ENST00000581570 WFDC13Q8IUB5 93 aa5.94□□□□□ -1.46
SS18-219ENST00000581570 TRBV7-4A0A0J9YYF1 115 aa5.93□□□□□ -1.46
SS18-219ENST00000581570 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
SS18-219ENST00000581570 H0YGX0 51 aa5.93□□□□□ -1.46
SS18-219ENST00000581570 FAM218AQ96MZ4 157 aa5.93□□□□□ -1.46
SS18-219ENST00000581570 ANKRD29Q8N6D5 301 aa5.91□□□□□ -1.46
SS18-219ENST00000581570 COA6Q5JTJ3 125 aaKnown RBP5.9□□□□□ -1.46
SS18-219ENST00000581570 RAB37Q96AX2 223 aa5.9□□□□□ -1.46
SS18-219ENST00000581570 A0A1B0GVX0 72 aa5.89□□□□□ -1.47
SS18-219ENST00000581570 HIST1H4GQ99525 98 aa5.89□□□□□ -1.47
SS18-219ENST00000581570 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
SS18-219ENST00000581570 A0A1B0GV72 72 aa5.86□□□□□ -1.47
SS18-219ENST00000581570 A0A1B0GX51 115 aa5.86□□□□□ -1.47
SS18-219ENST00000581570 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
SS18-219ENST00000581570 HSBP1L1C9JCN9 74 aa5.85□□□□□ -1.47
SS18-219ENST00000581570 TRACP01848 142 aa5.85□□□□□ -1.47
SS18-219ENST00000581570 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
SS18-219ENST00000581570 CCKP06307 115 aa5.84□□□□□ -1.47
SS18-219ENST00000581570 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
SS18-219ENST00000581570 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
SS18-219ENST00000581570 LYRM7Q5U5X0 104 aa5.83□□□□□ -1.48
SS18-219ENST00000581570 KMT2DO14686 5537 aa5.82□□□□□ -1.48
SS18-219ENST00000581570 MT1BP07438 61 aa5.81□□□□□ -1.48
SS18-219ENST00000581570 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
SS18-219ENST00000581570 Q5VV11 94 aa5.79□□□□□ -1.48
SS18-219ENST00000581570 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
SS18-219ENST00000581570 H3BQ85 93 aa5.77□□□□□ -1.49
SS18-219ENST00000581570 J3KT08 172 aa5.77□□□□□ -1.49
SS18-219ENST00000581570 ORMDL1Q9P0S3 153 aa5.77□□□□□ -1.49
SS18-219ENST00000581570 IGKV3D-7A0A0C4DH55 119 aa5.76□□□□□ -1.49
SS18-219ENST00000581570 DNAL4O96015 105 aa5.76□□□□□ -1.49
SS18-219ENST00000581570 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
SS18-219ENST00000581570 DSCR8Q96T75 97 aa5.76□□□□□ -1.49
SS18-219ENST00000581570 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
SS18-219ENST00000581570 TMEM256-PLSCR3K7ERE1 68 aa5.75□□□□□ -1.49
SS18-219ENST00000581570 NDUFB1O75438 58 aa5.74□□□□□ -1.49
SS18-219ENST00000581570 COX8AP10176 69 aa5.74□□□□□ -1.49
SS18-219ENST00000581570 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
SS18-219ENST00000581570 C8orf17Q9NRJ1 99 aa5.73□□□□□ -1.49
SS18-219ENST00000581570 PRO1854Q9UHT4 67 aa5.73□□□□□ -1.49
SS18-219ENST00000581570 FAM236AA0A1B0GUQ0 79 aa5.72□□□□□ -1.49
SS18-219ENST00000581570 FAM236BA0A1B0GV22 79 aa5.72□□□□□ -1.49
SS18-219ENST00000581570 TRIAP1O43715 76 aa5.72□□□□□ -1.49
SS18-219ENST00000581570 DLEU1O43261 78 aa5.71□□□□□ -1.5
SS18-219ENST00000581570 HIST1H2BLQ99880 126 aa5.7□□□□□ -1.5
SS18-219ENST00000581570 S100A2P29034 98 aa5.69□□□□□ -1.5
SS18-219ENST00000581570 UBE2V1Q13404 147 aa5.69□□□□□ -1.5
SS18-219ENST00000581570 Q6ZVQ6 151 aa5.69□□□□□ -1.5
SS18-219ENST00000581570 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
SS18-219ENST00000581570 HIST3H2BBQ8N257 126 aa5.68□□□□□ -1.5
SS18-219ENST00000581570 RBM3P98179 157 aaKnown RBP5.67□□□□□ -1.5
SS18-219ENST00000581570 HIGD1BQ9P298 99 aa5.67□□□□□ -1.5
SS18-219ENST00000581570 Q6ZQT0 140 aa5.66□□□□□ -1.5
SS18-219ENST00000581570 C14orf144Q96I85 54 aa5.66□□□□□ -1.5
SS18-219ENST00000581570 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
SS18-219ENST00000581570 CEND1Q8N111 149 aa5.65□□□□□ -1.5
SS18-219ENST00000581570 SPRR2EP22531 72 aa5.64□□□□□ -1.51
SS18-219ENST00000581570 SPRR2BP35325 72 aa5.64□□□□□ -1.51
SS18-219ENST00000581570 SPRR2AP35326 72 aa5.64□□□□□ -1.51
SS18-219ENST00000581570 PSMB2P49721 201 aa5.64□□□□□ -1.51
SS18-219ENST00000581570 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
SS18-219ENST00000581570 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
SS18-219ENST00000581570 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
SS18-219ENST00000581570 IGKV2D-30A0A075B6S6 120 aa5.62□□□□□ -1.51
SS18-219ENST00000581570 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
SS18-219ENST00000581570 C9JAW5 83 aa5.61□□□□□ -1.51
SS18-219ENST00000581570 FXYD2P54710 66 aa5.61□□□□□ -1.51
SS18-219ENST00000581570 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
SS18-219ENST00000581570 MRPL34Q9BQ48 92 aaKnown RBP5.61□□□□□ -1.51
SS18-219ENST00000581570 IMUPQ9GZP8 106 aa5.61□□□□□ -1.51
SS18-219ENST00000581570 COX6CP09669 75 aa5.6□□□□□ -1.51
SS18-219ENST00000581570 C7orf65Q6ZTY9 151 aa5.59□□□□□ -1.51
SS18-219ENST00000581570 PRR15Q8IV56 129 aa5.59□□□□□ -1.51
SS18-219ENST00000581570 TMEM254Q8TBM7 123 aa5.59□□□□□ -1.51
SS18-219ENST00000581570 NDUFS5O43920 106 aa5.58□□□□□ -1.52
SS18-219ENST00000581570 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
SS18-219ENST00000581570 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
SS18-219ENST00000581570 SPATA45Q537H7 98 aa5.56□□□□□ -1.52
SS18-219ENST00000581570 PAM16Q9Y3D7 125 aa5.56□□□□□ -1.52
SS18-219ENST00000581570 CSAG1Q6PB30 78 aa5.55□□□□□ -1.52
SS18-219ENST00000581570 KLKP1Q107X0 134 aa5.54□□□□□ -1.52
SS18-219ENST00000581570 hDV103S1A0JD37 113 aa5.53□□□□□ -1.52
SS18-219ENST00000581570 K7ERJ3 54 aa5.53□□□□□ -1.52
SS18-219ENST00000581570 Q5W150 140 aa5.53□□□□□ -1.52
SS18-219ENST00000581570 A0A1B0GW54 56 aa5.52□□□□□ -1.53
SS18-219ENST00000581570 S100A6P06703 90 aa5.52□□□□□ -1.53
SS18-219ENST00000581570 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
SS18-219ENST00000581570 S4R3F8 94 aa5.52□□□□□ -1.53
SS18-219ENST00000581570 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
SS18-219ENST00000581570 SCGB1C2P0DMR2 95 aa5.49□□□□□ -1.53
SS18-219ENST00000581570 NREPQ16612 68 aa5.48□□□□□ -1.53
SS18-219ENST00000581570 VAMP8Q9BV40 100 aa5.48□□□□□ -1.53
SS18-219ENST00000581570 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
SS18-219ENST00000581570 LCA10Q71F78 164 aa5.47□□□□□ -1.53
SS18-219ENST00000581570 LOC110117498A0A087WWA1 95 aa5.46□□□□□ -1.54
SS18-219ENST00000581570 SPRR2DP22532 72 aa5.46□□□□□ -1.54
SS18-219ENST00000581570 JMJD7-PLA2G4BH0Y9G9 81 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms