RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
COMMD4-218ENST00000567377 PDE6GP18545 87 aa9.33□□□□□ -0.92
COMMD4-218ENST00000567377 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
COMMD4-218ENST00000567377 Q6ZQT0 140 aa9.31□□□□□ -0.92
COMMD4-218ENST00000567377 NOTCH2NLQ7Z3S9 236 aa9.3□□□□□ -0.92
COMMD4-218ENST00000567377 TSTD3H0UI37 97 aa9.29□□□□□ -0.92
COMMD4-218ENST00000567377 LOC110117498A0A087WWA1 95 aa9.28□□□□□ -0.92
COMMD4-218ENST00000567377 NDUFB1O75438 58 aa9.27□□□□□ -0.93
COMMD4-218ENST00000567377 NAA38Q9BRA0 125 aaKnown RBP9.26□□□□□ -0.93
COMMD4-218ENST00000567377 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
COMMD4-218ENST00000567377 CRCT1Q9UGL9 99 aa9.22□□□□□ -0.93
COMMD4-218ENST00000567377 FAM236DA0A1B0GTK5 79 aa9.18□□□□□ -0.94
COMMD4-218ENST00000567377 A8MWP4 228 aa9.18□□□□□ -0.94
COMMD4-218ENST00000567377 FAM236CP0DP71 79 aa9.18□□□□□ -0.94
COMMD4-218ENST00000567377 LOC105371267A0A1B0GV96 52 aa9.17□□□□□ -0.94
COMMD4-218ENST00000567377 BATFQ16520 125 aa9.17□□□□□ -0.94
COMMD4-218ENST00000567377 C14orf132Q9NPU4 83 aa9.17□□□□□ -0.94
COMMD4-218ENST00000567377 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
COMMD4-218ENST00000567377 MPLKIPQ8TAP9 179 aa9.16□□□□□ -0.94
COMMD4-218ENST00000567377 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
COMMD4-218ENST00000567377 FSIP2Q5CZC0 6907 aa9.15□□□□□ -0.94
COMMD4-218ENST00000567377 HRES1P13985 223 aa9.15□□□□□ -0.94
COMMD4-218ENST00000567377 C9orf118A6NHY6 69 aa9.14□□□□□ -0.95
COMMD4-218ENST00000567377 NREPQ16612 68 aa9.14□□□□□ -0.95
COMMD4-218ENST00000567377 H3BT86 120 aa9.13□□□□□ -0.95
COMMD4-218ENST00000567377 MTURNQ8N3F0 131 aa9.13□□□□□ -0.95
COMMD4-218ENST00000567377 C8orf17Q9NRJ1 99 aa9.13□□□□□ -0.95
COMMD4-218ENST00000567377 IGKV3D-7A0A0C4DH55 119 aa9.1□□□□□ -0.95
COMMD4-218ENST00000567377 A0A1W2PPM0 123 aa9.09□□□□□ -0.95
COMMD4-218ENST00000567377 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
COMMD4-218ENST00000567377 TAX1BP3O14907 124 aa9.07□□□□□ -0.96
COMMD4-218ENST00000567377 SPINK7P58062 85 aa9.07□□□□□ -0.96
COMMD4-218ENST00000567377 Q6ZVQ6 151 aa9.07□□□□□ -0.96
COMMD4-218ENST00000567377 KRTAP9-8Q9BYQ0 159 aa9.05□□□□□ -0.96
COMMD4-218ENST00000567377 TMEM254Q8TBM7 123 aa9.02□□□□□ -0.97
COMMD4-218ENST00000567377 MRPL34Q9BQ48 92 aaKnown RBP8.99□□□□□ -0.97
COMMD4-218ENST00000567377 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
COMMD4-218ENST00000567377 hDV103S1A0JD37 113 aa8.96□□□□□ -0.98
COMMD4-218ENST00000567377 BPY2O14599 106 aa8.96□□□□□ -0.98
COMMD4-218ENST00000567377 SPCS1Q9Y6A9 102 aa8.96□□□□□ -0.98
COMMD4-218ENST00000567377 K7EQZ3 153 aa8.94□□□□□ -0.98
COMMD4-218ENST00000567377 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
COMMD4-218ENST00000567377 MT2AP02795 61 aa8.91□□□□□ -0.98
COMMD4-218ENST00000567377 COL5A1-AS1Q5SY13 56 aa8.91□□□□□ -0.98
COMMD4-218ENST00000567377 NDUFS5O43920 106 aa8.9□□□□□ -0.98
COMMD4-218ENST00000567377 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
COMMD4-218ENST00000567377 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
COMMD4-218ENST00000567377 UBL5Q9BZL1 73 aa8.83□□□□□ -1
COMMD4-218ENST00000567377 MT1FP04733 61 aa8.82□□□□□ -1
COMMD4-218ENST00000567377 CASC2Q6XLA1 102 aa8.82□□□□□ -1
COMMD4-218ENST00000567377 K7EP34 96 aa8.8□□□□□ -1
COMMD4-218ENST00000567377 PRO0461Q9UI25 63 aa8.8□□□□□ -1
COMMD4-218ENST00000567377 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
COMMD4-218ENST00000567377 H1FX-AS1Q4G0G2 97 aa8.78□□□□□ -1
COMMD4-218ENST00000567377 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
COMMD4-218ENST00000567377 USH2AO75445 5202 aa8.77□□□□□ -1.01
COMMD4-218ENST00000567377 CXCL6P80162 114 aa8.77□□□□□ -1.01
COMMD4-218ENST00000567377 Q8N9L7 120 aa8.77□□□□□ -1.01
COMMD4-218ENST00000567377 IGKV2D-30A0A075B6S6 120 aa8.76□□□□□ -1.01
COMMD4-218ENST00000567377 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
COMMD4-218ENST00000567377 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
COMMD4-218ENST00000567377 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
COMMD4-218ENST00000567377 Q5W150 140 aa8.75□□□□□ -1.01
COMMD4-218ENST00000567377 GTF2H5Q6ZYL4 71 aa8.75□□□□□ -1.01
COMMD4-218ENST00000567377 F8W1H4 67 aa8.7□□□□□ -1.02
COMMD4-218ENST00000567377 LCE2BO14633 110 aa8.7□□□□□ -1.02
COMMD4-218ENST00000567377 SSPOA2VEC9 5147 aa8.68□□□□□ -1.02
COMMD4-218ENST00000567377 PCP4L1A6NKN8 68 aa8.67□□□□□ -1.02
COMMD4-218ENST00000567377 TP53AIP1Q9HCN2 124 aa8.63□□□□□ -1.03
COMMD4-218ENST00000567377 C4orf26Q17RF5 130 aa8.6□□□□□ -1.03
COMMD4-218ENST00000567377 ETDBQ3ZM63 59 aa8.6□□□□□ -1.03
COMMD4-218ENST00000567377 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
COMMD4-218ENST00000567377 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
COMMD4-218ENST00000567377 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.04
COMMD4-218ENST00000567377 ACYP1P07311 99 aa8.51□□□□□ -1.05
COMMD4-218ENST00000567377 C1orf64Q8NEQ6 169 aa8.48□□□□□ -1.05
COMMD4-218ENST00000567377 KRTAP9-7A8MTY7 169 aa8.46□□□□□ -1.06
COMMD4-218ENST00000567377 KRTAP19-6Q3LI70 58 aa8.46□□□□□ -1.06
COMMD4-218ENST00000567377 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
COMMD4-218ENST00000567377 S4R3F8 94 aa8.45□□□□□ -1.06
COMMD4-218ENST00000567377 FAM240AA0A1B0GVK7 77 aa8.44□□□□□ -1.06
COMMD4-218ENST00000567377 ATP5EP2Q5VTU8 51 aa8.43□□□□□ -1.06
COMMD4-218ENST00000567377 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
COMMD4-218ENST00000567377 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
COMMD4-218ENST00000567377 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
COMMD4-218ENST00000567377 TRAV22A0A0B4J277 110 aa8.38□□□□□ -1.07
COMMD4-218ENST00000567377 LOC101927531A0A1B0GV80 90 aa8.37□□□□□ -1.07
COMMD4-218ENST00000567377 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
COMMD4-218ENST00000567377 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
COMMD4-218ENST00000567377 LCA10Q71F78 164 aa8.35□□□□□ -1.07
COMMD4-218ENST00000567377 UQCRQO14949 82 aa8.32□□□□□ -1.08
COMMD4-218ENST00000567377 HIST1H4AP62805 103 aaKnown RBP8.32□□□□□ -1.08
COMMD4-218ENST00000567377 ATOX1O00244 68 aa8.3□□□□□ -1.08
COMMD4-218ENST00000567377 LINC00643Q86TS7 51 aa8.27□□□□□ -1.09
COMMD4-218ENST00000567377 A0A1B0GV90 55 aa8.26□□□□□ -1.09
COMMD4-218ENST00000567377 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
COMMD4-218ENST00000567377 H0Y9P7 68 aa8.23□□□□□ -1.09
COMMD4-218ENST00000567377 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
COMMD4-218ENST00000567377 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
COMMD4-218ENST00000567377 KLKP1Q107X0 134 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms