RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NDUFB1O75438 58 aa8.64□□□□□ -1.03
USB1-211ENST00000565662 A0A1B0GVX0 72 aa8.63□□□□□ -1.03
USB1-211ENST00000565662 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
USB1-211ENST00000565662 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
USB1-211ENST00000565662 Q6ZQT0 140 aa8.6□□□□□ -1.03
USB1-211ENST00000565662 RBM12B-AS1Q9P1G2 102 aa8.59□□□□□ -1.03
USB1-211ENST00000565662 FLGP20930 4061 aaPredicted RBP8.58□□□□□ -1.04
USB1-211ENST00000565662 DEFB116Q30KQ4 102 aa8.58□□□□□ -1.04
USB1-211ENST00000565662 FAM236DA0A1B0GTK5 79 aa8.55□□□□□ -1.04
USB1-211ENST00000565662 FAM236CP0DP71 79 aa8.55□□□□□ -1.04
USB1-211ENST00000565662 MTURNQ8N3F0 131 aa8.55□□□□□ -1.04
USB1-211ENST00000565662 A8MWP4 228 aa8.51□□□□□ -1.05
USB1-211ENST00000565662 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
USB1-211ENST00000565662 H3BT86 120 aa8.5□□□□□ -1.05
USB1-211ENST00000565662 CRCT1Q9UGL9 99 aa8.5□□□□□ -1.05
USB1-211ENST00000565662 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
USB1-211ENST00000565662 NAA38Q9BRA0 125 aaKnown RBP8.49□□□□□ -1.05
USB1-211ENST00000565662 BATFQ16520 125 aa8.47□□□□□ -1.05
USB1-211ENST00000565662 NREPQ16612 68 aa8.47□□□□□ -1.05
USB1-211ENST00000565662 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
USB1-211ENST00000565662 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
USB1-211ENST00000565662 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.06
USB1-211ENST00000565662 C8orf17Q9NRJ1 99 aa8.45□□□□□ -1.06
USB1-211ENST00000565662 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
USB1-211ENST00000565662 HRES1P13985 223 aa8.44□□□□□ -1.06
USB1-211ENST00000565662 A0A1W2PPM0 123 aa8.41□□□□□ -1.06
USB1-211ENST00000565662 Q6ZVQ6 151 aa8.41□□□□□ -1.06
USB1-211ENST00000565662 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
USB1-211ENST00000565662 IGKV3D-7A0A0C4DH55 119 aa8.4□□□□□ -1.06
USB1-211ENST00000565662 TMEM254Q8TBM7 123 aa8.38□□□□□ -1.07
USB1-211ENST00000565662 SPINK7P58062 85 aa8.37□□□□□ -1.07
USB1-211ENST00000565662 TAX1BP3O14907 124 aa8.35□□□□□ -1.07
USB1-211ENST00000565662 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
USB1-211ENST00000565662 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
USB1-211ENST00000565662 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
USB1-211ENST00000565662 LOC105371267A0A1B0GV96 52 aa8.31□□□□□ -1.08
USB1-211ENST00000565662 BPY2O14599 106 aa8.31□□□□□ -1.08
USB1-211ENST00000565662 KRTAP9-8Q9BYQ0 159 aa8.31□□□□□ -1.08
USB1-211ENST00000565662 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
USB1-211ENST00000565662 SPCS1Q9Y6A9 102 aa8.3□□□□□ -1.08
USB1-211ENST00000565662 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
USB1-211ENST00000565662 K7EQZ3 153 aa8.27□□□□□ -1.09
USB1-211ENST00000565662 NDUFS5O43920 106 aa8.26□□□□□ -1.09
USB1-211ENST00000565662 COL5A1-AS1Q5SY13 56 aa8.26□□□□□ -1.09
USB1-211ENST00000565662 UBL5Q9BZL1 73 aa8.22□□□□□ -1.09
USB1-211ENST00000565662 MT2AP02795 61 aa8.2□□□□□ -1.1
USB1-211ENST00000565662 C7orf65Q6ZTY9 151 aa8.2□□□□□ -1.1
USB1-211ENST00000565662 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
USB1-211ENST00000565662 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
USB1-211ENST00000565662 CXCL6P80162 114 aa8.16□□□□□ -1.1
USB1-211ENST00000565662 K7EP34 96 aa8.15□□□□□ -1.1
USB1-211ENST00000565662 GTF2H5Q6ZYL4 71 aa8.15□□□□□ -1.1
USB1-211ENST00000565662 H1FX-AS1Q4G0G2 97 aa8.13□□□□□ -1.11
USB1-211ENST00000565662 IGKV2D-30A0A075B6S6 120 aa8.11□□□□□ -1.11
USB1-211ENST00000565662 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
USB1-211ENST00000565662 MT1FP04733 61 aa8.11□□□□□ -1.11
USB1-211ENST00000565662 IGKV2-30P06310 120 aa8.11□□□□□ -1.11
USB1-211ENST00000565662 SMCPP49901 116 aaPredicted RBP8.11□□□□□ -1.11
USB1-211ENST00000565662 PRO0461Q9UI25 63 aa8.1□□□□□ -1.11
USB1-211ENST00000565662 LINC00846Q9NV44 126 aa8.08□□□□□ -1.12
USB1-211ENST00000565662 F8W1H4 67 aa8.07□□□□□ -1.12
USB1-211ENST00000565662 Q8N9L7 120 aa8.07□□□□□ -1.12
USB1-211ENST00000565662 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
USB1-211ENST00000565662 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
USB1-211ENST00000565662 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
USB1-211ENST00000565662 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
USB1-211ENST00000565662 Q5W150 140 aa8.03□□□□□ -1.12
USB1-211ENST00000565662 USH2AO75445 5202 aa7.96□□□□□ -1.13
USB1-211ENST00000565662 LCE2BO14633 110 aa7.96□□□□□ -1.14
USB1-211ENST00000565662 ACYP1P07311 99 aa7.94□□□□□ -1.14
USB1-211ENST00000565662 ETDBQ3ZM63 59 aa7.93□□□□□ -1.14
USB1-211ENST00000565662 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
USB1-211ENST00000565662 ATP5EP2Q5VTU8 51 aa7.9□□□□□ -1.14
USB1-211ENST00000565662 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
USB1-211ENST00000565662 KRTAP19-1Q8IUB9 90 aa7.88□□□□□ -1.15
USB1-211ENST00000565662 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
USB1-211ENST00000565662 FAM240AA0A1B0GVK7 77 aa7.87□□□□□ -1.15
USB1-211ENST00000565662 PCP4L1A6NKN8 68 aa7.87□□□□□ -1.15
USB1-211ENST00000565662 S4R3F8 94 aa7.85□□□□□ -1.15
USB1-211ENST00000565662 C1orf64Q8NEQ6 169 aa7.84□□□□□ -1.15
USB1-211ENST00000565662 KRTAP9-7A8MTY7 169 aa7.82□□□□□ -1.16
USB1-211ENST00000565662 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
USB1-211ENST00000565662 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
USB1-211ENST00000565662 TRAV22A0A0B4J277 110 aa7.81□□□□□ -1.16
USB1-211ENST00000565662 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
USB1-211ENST00000565662 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
USB1-211ENST00000565662 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
USB1-211ENST00000565662 ATOX1O00244 68 aa7.77□□□□□ -1.17
USB1-211ENST00000565662 C5orf47Q569G3 176 aa7.77□□□□□ -1.17
USB1-211ENST00000565662 FCGBPQ9Y6R7 5405 aaPredicted RBP7.76□□□□□ -1.17
USB1-211ENST00000565662 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
USB1-211ENST00000565662 UQCRQO14949 82 aa7.73□□□□□ -1.17
USB1-211ENST00000565662 KRTAP3-1Q9BYR8 98 aa7.73□□□□□ -1.17
USB1-211ENST00000565662 LCA10Q71F78 164 aa7.72□□□□□ -1.17
USB1-211ENST00000565662 HIST1H4AP62805 103 aaKnown RBP7.71□□□□□ -1.18
USB1-211ENST00000565662 LINC00643Q86TS7 51 aa7.67□□□□□ -1.18
USB1-211ENST00000565662 A8MUN3 132 aa7.64□□□□□ -1.19
USB1-211ENST00000565662 H0Y9P7 68 aa7.63□□□□□ -1.19
USB1-211ENST00000565662 CRIPTQ9P021 101 aa7.62□□□□□ -1.19
USB1-211ENST00000565662 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms