RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 IFITM1P13164 125 aa1.39□□□□□ -2.19
LRRC28-218ENST00000560236 RPL37P61927 97 aaKnown RBP1.39□□□□□ -2.19
LRRC28-218ENST00000560236 RPL39P62891 51 aaKnown RBP1.39□□□□□ -2.19
LRRC28-218ENST00000560236 SPAG11BQ08648 103 aa1.39□□□□□ -2.19
LRRC28-218ENST00000560236 MRPL55Q7Z7F7 128 aaKnown RBP1.39□□□□□ -2.19
LRRC28-218ENST00000560236 TIMM21Q9BVV7 248 aa1.39□□□□□ -2.19
LRRC28-218ENST00000560236 SPANXA1Q9NS26 97 aa1.39□□□□□ -2.19
LRRC28-218ENST00000560236 TINCRA0A1B0GVN0 87 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 A8MUU9 505 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 C9JAW5 83 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 I3L3M4 83 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 IGLV6-57P01721 117 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 SCGB1C2P0DMR2 95 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 PSMB2P49721 201 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 HIST1H4AP62805 103 aaKnown RBP1.38□□□□□ -2.19
LRRC28-218ENST00000560236 ATXN8Q156A1 80 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 C6orf99Q4VX62 202 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 C2orf82Q6UX34 121 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 SCGB1D4Q6XE38 83 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 SSBP3-AS1Q7Z2R9 100 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 C5orf38Q86SI9 138 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 MUSTN1Q8IVN3 82 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 IMUPQ9GZP8 106 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 CDC42SE2Q9NRR3 84 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 C6orf48Q9UBA6 75 aa1.38□□□□□ -2.19
LRRC28-218ENST00000560236 ZNF706Q9Y5V0 76 aaPredicted RBP1.38□□□□□ -2.19
LRRC28-218ENST00000560236 LOC107984156A0A0G2JMH3 177 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 TEX49A0A1B0GTD5 131 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 CCDC179H3BU77 68 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 TRACP01848 142 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 ACYP1P07311 99 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 MGPP08493 103 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 SPRR2EP22531 72 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 SPRR2BP35325 72 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 SPRR2AP35326 72 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 TMEM170BQ5T4T1 132 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 SOSTDC1Q6X4U4 206 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 ARL17AQ8IVW1 177 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 ZNF625Q96I27 306 aaPredicted RBP1.37□□□□□ -2.19
LRRC28-218ENST00000560236 OBSCN-AS1Q96MR7 158 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 ANAPC13Q9BS18 74 aa1.37□□□□□ -2.19
LRRC28-218ENST00000560236 CSDC2Q9Y534 153 aaKnown RBP1.37□□□□□ -2.19
LRRC28-218ENST00000560236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.36□□□□□ -2.19
LRRC28-218ENST00000560236 A0A1B0GX51 115 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 IGKV2-29A2NJV5 120 aaPredicted RBP1.36□□□□□ -2.19
LRRC28-218ENST00000560236 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 A6NN06 94 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 SFTA2Q6UW10 78 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 UNQ6190/PRO20217Q6UXQ8 127 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 LINC00643Q86TS7 51 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 LINC00308Q8TCZ7 52 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 SMCR5Q8TEV8 140 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 LIMD2Q9BT23 127 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 TMEM126AQ9H061 195 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 CDKN2A-AS1Q9UH64 79 aa1.36□□□□□ -2.19
LRRC28-218ENST00000560236 UQCRQO14949 82 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 SNCGO76070 127 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 COX6CP09669 75 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 RPS28P62857 69 aaKnown RBP1.35□□□□□ -2.19
LRRC28-218ENST00000560236 HERVK_113P63121 156 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 PRLHP81277 87 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 FAM19A1Q7Z5A9 133 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 CLEC2BQ92478 149 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 SPRR4Q96PI1 79 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 SS18L2Q9UHA2 77 aa1.35□□□□□ -2.19
LRRC28-218ENST00000560236 IGHV3OR16-9A0A0B4J2B5 98 aa1.34□□□□□ -2.19
LRRC28-218ENST00000560236 MEIG1Q5JSS6 88 aa1.34□□□□□ -2.19
LRRC28-218ENST00000560236 Q6JHZ5 121 aa1.34□□□□□ -2.19
LRRC28-218ENST00000560236 ATP11AUNQ6ZP68 121 aa1.34□□□□□ -2.19
LRRC28-218ENST00000560236 COPS9Q8WXC6 57 aa1.34□□□□□ -2.19
LRRC28-218ENST00000560236 C20orf166-AS1Q96NR2 134 aa1.34□□□□□ -2.19
LRRC28-218ENST00000560236 TRAV13-2A0A0B4J235 113 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 TRAV13-1A0A0B4J241 112 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 TRBV10-3A0A0K0K1G6 114 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 FAM236AA0A1B0GUQ0 79 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 FAM236BA0A1B0GV22 79 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 H7C2G1 150 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 ATOX1O00244 68 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 BAALC-AS2P0C853 105 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 COX7CP15954 63 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 SPRR2DP22532 72 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 RNASE13Q5GAN3 156 aaKnown RBP1.33□□□□□ -2.2
LRRC28-218ENST00000560236 SMIM20Q8N5G0 67 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 HIGD2AQ9BW72 106 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 XAGE1AQ9HD64 81 aa1.33□□□□□ -2.2
LRRC28-218ENST00000560236 A8MWP4 228 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 H0YGX0 51 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 NDUFC2O95298 119 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 TMEM258P61165 79 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 ATP5EP2Q5VTU8 51 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 SERP2Q8N6R1 65 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 COX7B2Q8TF08 81 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 SPRR2FQ96RM1 72 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 CYSTM1Q9H1C7 97 aa1.32□□□□□ -2.2
LRRC28-218ENST00000560236 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 FAM236DA0A1B0GTK5 79 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 J3KT08 172 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 CCKP06307 115 aa1.31□□□□□ -2.2
LRRC28-218ENST00000560236 FAM236CP0DP71 79 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms