RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 COX6CP09669 75 aa11.78□□□□□ -0.52
PBX1-217ENST00000559578 MTURNQ8N3F0 131 aa11.78□□□□□ -0.52
PBX1-217ENST00000559578 HSD52Q0P140 79 aa11.77□□□□□ -0.53
PBX1-217ENST00000559578 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
PBX1-217ENST00000559578 UBE2V1Q13404 147 aa11.73□□□□□ -0.53
PBX1-217ENST00000559578 C8orf87E5RJ46 101 aa11.71□□□□□ -0.53
PBX1-217ENST00000559578 A0A1B0GVX0 72 aa11.7□□□□□ -0.54
PBX1-217ENST00000559578 LINC00846Q9NV44 126 aa11.68□□□□□ -0.54
PBX1-217ENST00000559578 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
PBX1-217ENST00000559578 PYY3Q5JQD4 70 aa11.66□□□□□ -0.54
PBX1-217ENST00000559578 MACF1Q9UPN3 7388 aaKnown RBP11.66□□□□□ -0.54
PBX1-217ENST00000559578 ZCCHC13Q8WW36 166 aaKnown RBP11.65□□□□□ -0.54
PBX1-217ENST00000559578 DSCR8Q96T75 97 aa11.64□□□□□ -0.55
PBX1-217ENST00000559578 SYNE2Q8WXH0 6885 aaKnown RBP11.64□□□□□ -0.55
PBX1-217ENST00000559578 SCGB1C2P0DMR2 95 aa11.63□□□□□ -0.55
PBX1-217ENST00000559578 SPINK7P58062 85 aa11.63□□□□□ -0.55
PBX1-217ENST00000559578 J3KT08 172 aa11.57□□□□□ -0.56
PBX1-217ENST00000559578 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
PBX1-217ENST00000559578 C9JAW5 83 aa11.56□□□□□ -0.56
PBX1-217ENST00000559578 BAALC-AS2P0C853 105 aa11.55□□□□□ -0.56
PBX1-217ENST00000559578 KRTAP19-6Q3LI70 58 aa11.55□□□□□ -0.56
PBX1-217ENST00000559578 A8MWP4 228 aa11.54□□□□□ -0.56
PBX1-217ENST00000559578 C21orf62-AS1Q17RA5 79 aa11.53□□□□□ -0.56
PBX1-217ENST00000559578 NDUFB1O75438 58 aa11.52□□□□□ -0.57
PBX1-217ENST00000559578 Q6ZQT0 140 aa11.52□□□□□ -0.57
PBX1-217ENST00000559578 Q8N9P0 234 aaPredicted RBP11.5□□□□□ -0.57
PBX1-217ENST00000559578 WFDC13Q8IUB5 93 aa11.49□□□□□ -0.57
PBX1-217ENST00000559578 LYRM7Q5U5X0 104 aa11.48□□□□□ -0.57
PBX1-217ENST00000559578 C8orf17Q9NRJ1 99 aa11.45□□□□□ -0.58
PBX1-217ENST00000559578 IGKV3D-7A0A0C4DH55 119 aa11.38□□□□□ -0.59
PBX1-217ENST00000559578 JMJD7-PLA2G4BH0Y9G9 81 aa11.38□□□□□ -0.59
PBX1-217ENST00000559578 ATXN8Q156A1 80 aa11.37□□□□□ -0.59
PBX1-217ENST00000559578 TMA7Q9Y2S6 64 aaKnown RBP11.37□□□□□ -0.59
PBX1-217ENST00000559578 Q6ZVQ6 151 aa11.36□□□□□ -0.59
PBX1-217ENST00000559578 NAA38Q9BRA0 125 aaKnown RBP11.36□□□□□ -0.59
PBX1-217ENST00000559578 LOC110117498A0A087WWA1 95 aa11.35□□□□□ -0.59
PBX1-217ENST00000559578 A0A1B0GW54 56 aa11.34□□□□□ -0.59
PBX1-217ENST00000559578 C14orf132Q9NPU4 83 aa11.31□□□□□ -0.6
PBX1-217ENST00000559578 PDE6GP18545 87 aa11.3□□□□□ -0.6
PBX1-217ENST00000559578 PRR15Q8IV56 129 aa11.29□□□□□ -0.6
PBX1-217ENST00000559578 KRTAP6-3Q3LI67 103 aa11.27□□□□□ -0.61
PBX1-217ENST00000559578 H1FX-AS1Q4G0G2 97 aa11.27□□□□□ -0.61
PBX1-217ENST00000559578 NREPQ16612 68 aa11.26□□□□□ -0.61
PBX1-217ENST00000559578 M0R143 59 aa11.25□□□□□ -0.61
PBX1-217ENST00000559578 TMEM254Q8TBM7 123 aa11.24□□□□□ -0.61
PBX1-217ENST00000559578 MRPL34Q9BQ48 92 aaKnown RBP11.24□□□□□ -0.61
PBX1-217ENST00000559578 MMP24-AS1A0A0U1RRL7 71 aa11.23□□□□□ -0.61
PBX1-217ENST00000559578 NDUFS5O43920 106 aa11.19□□□□□ -0.62
PBX1-217ENST00000559578 hDV103S1A0JD37 113 aa11.16□□□□□ -0.62
PBX1-217ENST00000559578 K7EQZ3 153 aa11.14□□□□□ -0.63
PBX1-217ENST00000559578 IGKV2D-30A0A075B6S6 120 aa11.11□□□□□ -0.63
PBX1-217ENST00000559578 IGKV2-30P06310 120 aa11.11□□□□□ -0.63
PBX1-217ENST00000559578 C7orf65Q6ZTY9 151 aa11.05□□□□□ -0.64
PBX1-217ENST00000559578 Q5W150 140 aa11.04□□□□□ -0.64
PBX1-217ENST00000559578 BPY2O14599 106 aa11.02□□□□□ -0.65
PBX1-217ENST00000559578 BATFQ16520 125 aa11.02□□□□□ -0.65
PBX1-217ENST00000559578 H3BT86 120 aa10.98□□□□□ -0.65
PBX1-217ENST00000559578 NEBP20929 6669 aa10.96□□□□□ -0.66
PBX1-217ENST00000559578 HCG22E2RYF7 251 aa10.94□□□□□ -0.66
PBX1-217ENST00000559578 C4orf26Q17RF5 130 aa10.94□□□□□ -0.66
PBX1-217ENST00000559578 CASC2Q6XLA1 102 aa10.94□□□□□ -0.66
PBX1-217ENST00000559578 Q8N9L7 120 aa10.94□□□□□ -0.66
PBX1-217ENST00000559578 TSTD3H0UI37 97 aa10.92□□□□□ -0.66
PBX1-217ENST00000559578 SMIM6P0DI80 62 aa10.92□□□□□ -0.66
PBX1-217ENST00000559578 FAM236AA0A1B0GUQ0 79 aa10.91□□□□□ -0.66
PBX1-217ENST00000559578 FAM236BA0A1B0GV22 79 aa10.91□□□□□ -0.66
PBX1-217ENST00000559578 A6NN06 94 aa10.91□□□□□ -0.66
PBX1-217ENST00000559578 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
PBX1-217ENST00000559578 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
PBX1-217ENST00000559578 A0A1W2PPM0 123 aa10.87□□□□□ -0.67
PBX1-217ENST00000559578 TAX1BP3O14907 124 aa10.84□□□□□ -0.67
PBX1-217ENST00000559578 CXCL6P80162 114 aa10.83□□□□□ -0.68
PBX1-217ENST00000559578 Q5VV11 94 aa10.83□□□□□ -0.68
PBX1-217ENST00000559578 MT1BP07438 61 aa10.81□□□□□ -0.68
PBX1-217ENST00000559578 S4R3F8 94 aa10.77□□□□□ -0.69
PBX1-217ENST00000559578 CSAG1Q6PB30 78 aa10.76□□□□□ -0.69
PBX1-217ENST00000559578 SPRR2GQ9BYE4 73 aa10.75□□□□□ -0.69
PBX1-217ENST00000559578 KRTAP19-8Q3LI54 63 aa10.74□□□□□ -0.69
PBX1-217ENST00000559578 KRTAP3-1Q9BYR8 98 aa10.73□□□□□ -0.69
PBX1-217ENST00000559578 MUC12Q9UKN1 5478 aa10.71□□□□□ -0.69
PBX1-217ENST00000559578 SPCS1Q9Y6A9 102 aa10.7□□□□□ -0.7
PBX1-217ENST00000559578 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
PBX1-217ENST00000559578 C1orf64Q8NEQ6 169 aa10.69□□□□□ -0.7
PBX1-217ENST00000559578 UBL5Q9BZL1 73 aa10.68□□□□□ -0.7
PBX1-217ENST00000559578 KRTAP10-5P60370 271 aa10.67□□□□□ -0.7
PBX1-217ENST00000559578 LCA10Q71F78 164 aa10.67□□□□□ -0.7
PBX1-217ENST00000559578 KRTAP20-1Q3LI63 56 aa10.65□□□□□ -0.7
PBX1-217ENST00000559578 KLKP1Q107X0 134 aa10.6□□□□□ -0.71
PBX1-217ENST00000559578 KRTAP5-9P26371 169 aa10.58□□□□□ -0.72
PBX1-217ENST00000559578 TP53AIP1Q9HCN2 124 aa10.53□□□□□ -0.72
PBX1-217ENST00000559578 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
PBX1-217ENST00000559578 LOC105371267A0A1B0GV96 52 aa10.49□□□□□ -0.73
PBX1-217ENST00000559578 IMUPQ9GZP8 106 aa10.49□□□□□ -0.73
PBX1-217ENST00000559578 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.73
PBX1-217ENST00000559578 CRIPTQ9P021 101 aa10.46□□□□□ -0.73
PBX1-217ENST00000559578 K7EP34 96 aa10.44□□□□□ -0.74
PBX1-217ENST00000559578 COL5A1-AS1Q5SY13 56 aa10.42□□□□□ -0.74
PBX1-217ENST00000559578 KMT2DO14686 5537 aa10.42□□□□□ -0.74
PBX1-217ENST00000559578 CYP4F30PQ9H0H9 118 aa10.39□□□□□ -0.75
PBX1-217ENST00000559578 A0A087WVE0 104 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms